Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.4e-226 789.3 390 100.0
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.2e-182 643.3 390 81.8
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 1.8e-80 303.9 384 45.1
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 7.2e-66 255.4 384 40.1
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 9.4e-66 255.0 387 37.7
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 6.1e-65 252.3 386 40.2
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.8e-64 250.8 384 39.6
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.8e-64 250.8 384 37.8
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.8e-64 250.8 384 37.8
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 2.3e-64 250.4 384 39.1
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 3.0e-64 250.0 384 38.3
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 5.2e-64 249.2 379 40.1
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 1.1e-63 248.1 384 40.6
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 2.6e-63 246.9 384 39.3
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 4.4e-63 246.1 383 40.7
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 5.7e-63 245.7 383 38.9
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 7.5e-63 245.4 383 39.9
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 1.3e-62 244.6 384 38.0
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 1.7e-62 244.2 384 38.3
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 2.2e-62 243.8 386 37.6
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 6.3e-62 242.3 384 38.3
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.1e-61 241.5 386 37.6
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.8e-61 240.7 366 38.5
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 2.4e-61 240.4 384 38.8
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 4.1e-61 239.6 386 37.0
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 5.3e-61 239.2 383 38.4
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 5.3e-61 239.2 384 39.3
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 5.3e-61 239.2 386 37.8
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 1.2e-60 238.0 366 38.3
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 4.5e-60 236.1 384 37.5
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 5.9e-60 235.7 384 36.7
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 5.9e-60 235.7 384 38.3
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 5.9e-60 235.7 384 37.5
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 7.7e-60 235.3 373 39.9
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 7.7e-60 235.3 384 38.3
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 1.0e-59 235.0 388 35.8
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 1.0e-59 235.0 384 38.8
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 1.3e-59 234.6 384 37.8
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 1.7e-59 234.2 384 36.7
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 3.8e-59 233.0 382 37.7
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 3.8e-59 233.0 384 38.3
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 6.5e-59 232.3 396 36.6
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 2.5e-58 230.3 386 37.0
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 3.2e-58 229.9 385 36.1
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 3.2e-58 229.9 383 35.8
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 7.2e-58 228.8 374 37.4
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.2e-57 228.0 374 37.4
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 2.1e-57 227.3 401 35.4
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 2.7e-57 226.9 389 36.8
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 3.6e-57 226.5 371 37.7
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 6.1e-57 225.7 383 37.6
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 8.0e-57 225.3 383 37.6
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 1.0e-56 224.9 384 37.2
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 1.4e-56 224.6 377 36.3
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 1.8e-56 224.2 385 36.4
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 1.8e-56 224.2 382 35.6
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 1.8e-56 224.2 354 36.7
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 2.3e-56 223.8 383 35.8
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.3e-56 223.8 389 37.8
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 2.3e-56 223.8 384 34.1
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 3.0e-56 223.4 388 35.8
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 4.0e-56 223.0 388 34.8
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 4.0e-56 223.0 384 37.0
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 6.8e-56 222.2 385 37.1
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 1.2e-55 221.5 380 35.8
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 1.2e-55 221.5 389 38.0
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 2.0e-55 220.7 389 37.0
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 2.6e-55 220.3 384 34.9
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 3.4e-55 219.9 357 36.1
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 3.4e-55 219.9 386 36.5
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 3.4e-55 219.9 385 37.4
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 5.7e-55 219.2 383 37.6
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 9.8e-55 218.4 385 36.4
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 1.3e-54 218.0 383 35.8
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 2.2e-54 217.2 383 36.8
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 4.8e-54 216.1 385 36.4
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 8.3e-54 215.3 374 36.9
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 2.4e-53 213.8 390 33.8
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 4.1e-53 213.0 384 35.4
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 5.4e-53 212.6 323 38.7
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 7.0e-53 212.2 381 35.7
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 7.0e-53 212.2 376 34.0
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 9.1e-53 211.8 383 35.0
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 1.6e-52 211.1 360 38.3
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 3.8e-51 206.5 385 33.8
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 5.0e-51 206.1 388 35.1
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 9.4e-50 201.8 378 35.2
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 1.2e-49 201.4 397 34.0
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 1.6e-49 201.1 364 33.5
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 2.1e-49 200.7 337 35.3
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 1.4e-48 198.0 388 34.0
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 2.3e-48 197.2 390 34.6
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 2.3e-48 197.2 390 34.6
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 3.0e-48 196.8 389 32.9
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 5.2e-48 196.1 383 32.9
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 6.8e-48 195.7 390 33.8
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 1.5e-47 194.5 386 32.6
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 5.7e-47 192.6 391 33.8
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 4.9e-46 189.5 322 35.7
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 7.0e-45 185.7 349 32.7
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 2.0e-44 184.1 304 37.2
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 5.6e-42 176.0 357 32.8
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 1.5e-39 167.9 385 30.4
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 2.9e-38 163.7 208 44.2
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 1.8e-37 161.0 213 42.7
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 5.6e-34 149.4 384 31.2
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 7.3e-34 149.1 212 42.9
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 4.9e-30 136.3 132 52.3
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 6.2e-25 119.4 133 45.9
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 1.8e-24 117.9 131 48.1
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 3.4e-23 113.6 122 50.0
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 6.4e-22 109.4 167 32.9
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 1.6e-17 94.7 120 41.7
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 4.7e-17 93.2 351 25.9
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 2.0e-15 87.8 114 40.4
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 7.1e-13 79.3 85 49.4
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 1.1e-10 72.0 144 32.6
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.2e-09 68.6 102 40.2
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 1.1e-08 65.5 86 37.2
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 4.0e-08 63.5 169 30.8
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 7.6e-07 59.3 64 42.2


User provided reference genes

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