Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 3.4e-269 931.0 450 100.0
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 6.1e-109 398.7 312 60.6
AagrBONN_evm.TU.Sc2ySwM_362.1561 Anthoceros agrestis HOM05D006399 ORTHO05D007988 3.6e-101 372.9 287 62.0
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 8.5e-87 325.1 372 46.0
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 3.7e-82 309.7 377 45.1
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.8e-81 307.4 377 44.8
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 9.5e-54 215.3 255 44.7
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.2e-35 155.2 393 33.1
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.2e-35 155.2 393 33.1
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 8.4e-34 149.1 430 29.3
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 1.1e-33 148.7 376 31.6
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 4.2e-33 146.7 377 30.8
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 9.3e-33 145.6 376 30.6
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 9.3e-33 145.6 399 32.3
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 9.3e-33 145.6 393 31.8
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.2e-32 145.2 377 30.8
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 2.1e-32 144.4 381 33.3
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 2.1e-32 144.4 393 32.1
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.6e-32 143.3 377 30.5
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 6.0e-32 142.9 387 31.5
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 7.8e-32 142.5 399 31.6
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 7.8e-32 142.5 416 30.8
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 1.3e-31 141.7 408 30.9
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.7e-31 141.4 408 30.9
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 3.0e-31 140.6 376 31.1
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 5.1e-31 139.8 399 31.1
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 5.1e-31 139.8 428 30.1
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 8.7e-31 139.0 454 28.9
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 8.7e-31 139.0 411 30.4
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 1.1e-30 138.7 385 32.7
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.5e-30 137.5 481 30.1
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 3.3e-30 137.1 368 31.5
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 9.6e-30 135.6 388 30.7
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 3.6e-29 133.7 394 30.5
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 3.6e-29 133.7 392 30.1
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 3.6e-29 133.7 414 29.5
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 4.8e-29 133.3 401 29.9
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 6.2e-29 132.9 395 30.1
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.1e-28 132.1 395 29.9
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 1.4e-28 131.7 404 29.7
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 1.8e-28 131.3 387 30.2
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 1.8e-28 131.3 396 31.3
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 3.1e-28 130.6 481 28.3
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 4.0e-28 130.2 415 28.9
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 4.0e-28 130.2 396 31.3
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 9.0e-28 129.0 379 29.8
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.2e-27 128.6 397 29.5
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 2.0e-27 127.9 379 29.8
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 2.6e-27 127.5 482 28.6
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 2.6e-27 127.5 483 28.6
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 2.6e-27 127.5 418 28.2
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 3.4e-27 127.1 424 28.5
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 5.8e-27 126.3 460 29.1
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 9.9e-27 125.6 404 30.0
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 9.9e-27 125.6 407 29.5
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 9.9e-27 125.6 392 30.4
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 9.9e-27 125.6 392 29.8
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.7e-26 124.8 383 29.0
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.2e-26 124.4 482 29.3
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 2.2e-26 124.4 396 29.5
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 2.9e-26 124.0 439 29.2
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 2.9e-26 124.0 378 29.4
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 3.8e-26 123.6 396 28.0
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 3.8e-26 123.6 398 29.6
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 3.8e-26 123.6 392 30.4
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 4.9e-26 123.2 401 30.9
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 6.4e-26 122.9 421 29.0
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.9e-25 121.3 374 30.7
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 2.4e-25 120.9 384 28.6
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 2.4e-25 120.9 376 30.3
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.4e-25 120.9 472 26.3
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 5.4e-25 119.8 341 29.6
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 7.1e-25 119.4 414 28.0
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 9.3e-25 119.0 381 29.4
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.2e-24 118.6 390 29.0
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 7.9e-24 115.9 406 28.3
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 2.3e-23 114.4 441 26.8
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 3.9e-23 113.6 400 29.2
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 5.1e-23 113.2 376 30.1
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 5.1e-23 113.2 216 38.0
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 1.1e-22 112.1 410 28.8
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 4.8e-21 106.7 407 29.0
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 1.8e-20 104.8 437 26.1
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 5.8e-19 99.8 364 27.5
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 2.4e-12 77.8 130 38.5
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 2.6e-11 74.3 233 28.3
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 1.7e-10 71.6 224 29.0
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.9e-09 68.2 334 25.7
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 1.3e-07 62.0 227 26.9


User provided reference genes

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