Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_8360 Physcomitrium patens HOM05D000489 ORTHO05D000372 9.4e-78 293.9 200 100.0
Pp3c7_20230 Physcomitrium patens HOM05D000489 ORTHO05D000372 9.2e-25 117.9 114 51.8
Pp3c11_11470 Physcomitrium patens HOM05D000489 ORTHO05D000372 1.2e-16 90.9 118 42.4
Pp3c14_3790 Physcomitrium patens HOM05D000489 ORTHO05D000372 1.2e-13 80.9 145 37.9
Pp3c14_3810 Physcomitrium patens HOM05D000489 ORTHO05D000372 1.2e-13 80.9 145 37.9
Pp3c10_4720 Physcomitrium patens HOM05D000489 ORTHO05D000372 1.1e-12 77.8 116 41.4
Pp3c19_17730 Physcomitrium patens HOM05D001204 ORTHO05D001428 6.4e-10 68.6 120 35.8
Migut.G00355 Erythranthe guttata HOM05D000489 ORTHO05D000372 4.1e-09 65.9 105 35.2
PSO761G0315 Papaver somniferum HOM05D000489 ORTHO05D000372 9.2e-09 64.7 94 39.4
AagrBONN_evm.TU.Sc2ySwM_344.1345 Anthoceros agrestis HOM05D015306 ORTHO05D000372 1.6e-08 63.9 119 39.5
Nitab4.5_0012606g0030 Nicotiana tabacum HOM05D000489 ORTHO05D000372 2.1e-08 63.5 92 37.0
Eucgr.K03347 Eucalyptus grandis HOM05D000489 ORTHO05D000372 1.0e-07 61.2 108 38.9
unitig_8.g3724 Utricularia gibba HOM05D000489 ORTHO05D000372 1.0e-07 61.2 126 35.7
Os03g0793800 Oryza sativa ssp. japonica HOM05D000489 ORTHO05D000372 1.3e-07 60.8 99 37.4
PGSC0003DMG400013434 Solanum tuberosum HOM05D000489 ORTHO05D000372 1.3e-07 60.8 90 36.7
TAR622G0486 Trochodendron aralioides HOM05D001204 ORTHO05D009253 1.3e-07 60.8 94 35.1
CDE05G2271 Ceratophyllum demersum HOM05D000489 ORTHO05D000372 1.7e-07 60.5 118 36.4
Thhalv10026452m.g Eutrema salsugineum HOM05D000489 ORTHO05D000372 3.0e-07 59.7 96 37.5
SEGI_13776 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 3.9e-07 59.3 78 42.3
Aa31LG9G2560 Aethionema arabicum HOM05D000489 ORTHO05D000372 5.1e-07 58.9 96 35.4
CSS0026482 Camellia sinensis var. sinensis HOM05D000489 ORTHO05D000372 5.1e-07 58.9 111 33.3
Medtr1g103450 Medicago truncatula HOM05D000489 ORTHO05D000372 5.1e-07 58.9 116 33.6
SEGI_17723 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 5.1e-07 58.9 91 38.5
Solyc03g005200.3 Solanum lycopersicum HOM05D000489 ORTHO05D000372 5.1e-07 58.9 91 38.5
Migut.D00323 Erythranthe guttata HOM05D000489 ORTHO05D000372 6.6e-07 58.5 125 36.8
Gohir.D02G039700 Gossypium hirsutum HOM05D000489 ORTHO05D000372 6.6e-07 58.5 112 34.8
Rhsim13G0208600 Rhododendron simsii HOM05D001204 ORTHO05D009253 6.6e-07 58.5 90 34.4
ATR0665G088 Amborella trichopoda HOM05D001204 ORTHO05D001428 1.1e-06 57.8 126 31.0
Gorai.005G044000 Gossypium raimondii HOM05D000489 ORTHO05D000372 1.1e-06 57.8 112 34.8
SMO364G0065 Selaginella moellendorffii HOM05D000489 ORTHO05D000372 1.1e-06 57.8 71 40.8
MSTRG.24733 Avicennia marina HOM05D000489 ORTHO05D000372 1.5e-06 57.4 94 34.0
Eucgr.K03348 Eucalyptus grandis HOM05D000489 ORTHO05D000372 1.5e-06 57.4 113 36.3
Lj3A732G71 Lonicera japonica HOM05D000489 ORTHO05D000372 1.5e-06 57.4 103 36.9
Nitab4.5_0001237g0040 Nicotiana tabacum HOM05D000489 ORTHO05D000372 1.5e-06 57.4 111 33.3
SGA_v2.0_scaffold1G00504 Striga asiatica HOM05D000489 ORTHO05D000372 1.5e-06 57.4 119 37.0
BcaC01g03435 Brassica carinata HOM05D000489 ORTHO05D000372 2.5e-06 56.6 92 35.9
Eucgr.B00719 Eucalyptus grandis HOM05D001204 ORTHO05D009253 2.5e-06 56.6 127 29.9
Aqoxy3G00324 Aquilegia oxysepala HOM05D001204 ORTHO05D009253 3.3e-06 56.2 91 38.5
Glyma.10G028200 Glycine max HOM05D002080 ORTHO05D002062 3.3e-06 56.2 122 37.7
THA.LOC104808556 Tarenaya hassleriana HOM05D000489 ORTHO05D000372 3.3e-06 56.2 104 35.6
Peaxi162Scf00402g00511 Petunia axillaris HOM05D000489 ORTHO05D000372 4.3e-06 55.8 114 31.6
PGR004G2862 Punica granatum HOM05D000489 ORTHO05D000372 4.3e-06 55.8 115 33.0
MD11G1282300 Malus domestica HOM05D000489 ORTHO05D000372 5.6e-06 55.5 92 34.8
Nitab4.5_0008064g0030 Nicotiana tabacum HOM05D000489 ORTHO05D000372 5.6e-06 55.5 88 38.6
SEGI_34925 Sequoiadendron giganteum HOM05D000489 ORTHO05D000372 5.6e-06 55.5 92 37.0
VMungo0720G1839 Vigna mungo HOM05D000489 ORTHO05D000372 5.6e-06 55.5 115 30.4
A07p39740 Brassica napus HOM05D001204 ORTHO05D009253 7.3e-06 55.1 91 34.1
C03p52620 Brassica napus HOM05D000489 ORTHO05D000372 7.3e-06 55.1 92 33.7
BolC3t17530H Brassica oleracea HOM05D000489 ORTHO05D000372 7.3e-06 55.1 92 33.7
Nitab4.5_0001157g0050 Nicotiana tabacum HOM05D000489 ORTHO05D000372 7.3e-06 55.1 111 31.5
Pp3c21_12160 Physcomitrium patens HOM05D000489 ORTHO05D001428 7.3e-06 55.1 76 39.5
BraA07t31523Z Brassica rapa HOM05D001204 ORTHO05D009253 9.6e-06 54.7 91 34.1
Carub.0003s2275 Capsella rubella HOM05D000489 ORTHO05D000372 9.6e-06 54.7 90 38.9
CDE02G2277 Ceratophyllum demersum HOM05D000489 ORTHO05D000372 9.6e-06 54.7 116 34.5
Nitab4.5_0007068g0070 Nicotiana tabacum HOM05D000489 ORTHO05D000372 9.6e-06 54.7 64 42.2
SEGI_19364 Sequoiadendron giganteum HOM05D001204 ORTHO05D001428 9.6e-06 54.7 111 36.0


User provided reference genes

Program Settings