Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 5.1e-168 594.3 302 100.0
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 6.8e-88 328.2 298 55.7
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 1.7e-86 323.6 312 52.6
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 2.2e-86 323.2 309 53.4
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 3.7e-86 322.4 311 52.7
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 1.1e-85 320.9 312 52.2
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.4e-85 320.5 310 54.2
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 5.4e-85 318.5 306 52.6
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 5.4e-85 318.5 311 53.1
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 7.0e-85 318.2 314 52.2
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 9.1e-85 317.8 291 54.0
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 9.1e-85 317.8 312 52.2
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 2.0e-84 316.6 312 52.9
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 2.0e-84 316.6 312 53.2
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 2.0e-84 316.6 320 50.3
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 2.7e-84 316.2 308 53.2
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 4.5e-84 315.5 312 51.6
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 4.5e-84 315.5 307 52.1
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 5.9e-84 315.1 312 52.2
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 7.7e-84 314.7 302 52.6
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 7.7e-84 314.7 301 53.2
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 1.0e-83 314.3 302 52.3
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 2.3e-83 313.2 311 51.4
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 2.3e-83 313.2 312 50.6
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 2.9e-83 312.8 316 50.9
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 2.9e-83 312.8 312 52.2
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 2.9e-83 312.8 302 52.3
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 5.0e-83 312.0 302 52.0
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 5.0e-83 312.0 308 52.3
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 5.0e-83 312.0 309 52.1
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 6.6e-83 311.6 314 51.9
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 8.6e-83 311.2 302 52.0
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.1e-82 310.8 302 52.0
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 1.5e-82 310.5 307 52.4
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 1.5e-82 310.5 301 51.8
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 1.9e-82 310.1 315 51.4
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 2.5e-82 309.7 312 51.3
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.5e-82 309.7 312 51.0
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 4.2e-82 308.9 307 52.1
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 5.6e-82 308.5 303 51.8
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 7.2e-82 308.1 311 51.8
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 7.2e-82 308.1 304 52.3
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 9.5e-82 307.8 315 51.1
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 1.2e-81 307.4 312 51.0
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 1.6e-81 307.0 314 50.3
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 1.6e-81 307.0 301 52.8
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 1.6e-81 307.0 300 51.7
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 2.1e-81 306.6 285 55.1
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 2.1e-81 306.6 307 51.5
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 2.1e-81 306.6 312 50.3
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 2.1e-81 306.6 319 50.5
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 3.6e-81 305.8 314 50.0
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 3.6e-81 305.8 311 50.8
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 4.7e-81 305.4 314 50.6
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 4.7e-81 305.4 314 50.3
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 6.1e-81 305.1 315 50.8
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 6.1e-81 305.1 310 49.7
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 8.0e-81 304.7 308 50.3
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 1.0e-80 304.3 300 51.7
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 1.0e-80 304.3 319 49.5
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 2.3e-80 303.1 300 52.0
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 3.0e-80 302.8 311 52.1
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 6.8e-80 301.6 300 51.7
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 6.8e-80 301.6 300 51.3
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 8.9e-80 301.2 308 51.6
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 8.9e-80 301.2 314 51.3
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.2e-79 300.8 308 50.3
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 1.2e-79 300.8 314 49.7
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 1.5e-79 300.4 300 51.3
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.5e-79 300.4 316 49.7
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.5e-79 300.4 316 49.7
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 2.0e-79 300.1 300 50.7
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 2.0e-79 300.1 329 49.5
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 2.6e-79 299.7 318 47.5
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 3.4e-79 299.3 316 49.4
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 4.4e-79 298.9 310 51.0
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 1.7e-78 297.0 300 50.7
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 2.2e-78 296.6 300 50.7
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 2.9e-78 296.2 312 50.3
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 2.9e-78 296.2 301 51.2
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 3.7e-78 295.8 316 47.8
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 4.9e-78 295.4 298 52.0
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 8.3e-78 294.7 312 49.4
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 1.4e-77 293.9 308 49.7
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 1.8e-77 293.5 339 47.2
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 2.4e-77 293.1 305 50.8
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 3.2e-77 292.7 314 47.8
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 7.0e-77 291.6 287 53.7
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 7.0e-77 291.6 329 48.6
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 1.2e-76 290.8 314 47.8
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 2.0e-76 290.0 309 47.6
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 3.5e-76 289.3 309 49.8
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 7.8e-76 288.1 300 50.0
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 1.3e-75 287.3 280 51.8
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 2.3e-75 286.6 306 47.7
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 6.6e-75 285.0 307 49.2
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 8.6e-75 284.6 306 48.4
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 4.3e-74 282.3 324 45.7
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 3.6e-73 279.3 284 51.8
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 6.8e-72 275.0 306 48.4
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 8.9e-72 274.6 312 48.4
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 1.5e-71 273.9 262 51.9
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 3.2e-69 266.2 337 45.1
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 1.2e-65 254.2 240 53.3
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 6.2e-65 251.9 277 49.1
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.1e-64 251.1 361 42.9
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 1.4e-64 250.8 240 52.5
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 3.7e-62 242.7 318 42.5
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 3.5e-60 236.1 237 51.9
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 2.5e-58 229.9 267 46.1
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 3.3e-58 229.6 206 53.9
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 4.7e-57 225.7 217 53.9
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 3.1e-56 223.0 226 51.8
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.3e-54 217.6 196 57.1
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 5.4e-53 212.2 397 34.0
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 1.9e-50 203.8 242 47.5
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 6.8e-48 195.3 284 40.5
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 1.2e-31 141.4 316 34.5
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 3.0e-27 126.7 152 47.4
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-24 118.2 229 35.4
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 4.0e-24 116.3 194 36.6
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 5.8e-23 112.5 143 44.8
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.0e-22 111.7 143 44.1
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 2.5e-21 107.1 112 45.5
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 5.5e-21 105.9 143 42.7
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 1.7e-14 84.3 131 39.7
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 1.4e-13 81.3 105 41.9
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 2.1e-12 77.4 155 35.5
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 8.7e-11 72.0 214 27.1
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 1.6e-09 67.8 80 40.0
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 5.3e-08 62.8 70 45.7


User provided reference genes

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