Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_25910 Physcomitrium patens HOM05D008523 ORTHO05D010723 0.0e+00 1858.2 937 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1100 Anthoceros agrestis HOM05D008523 ORTHO05D010723 0.0e+00 1082.4 826 65.6
Mapoly0082s0057 Marchantia polymorpha HOM05D008523 ORTHO05D010723 1.3e-302 1043.1 848 62.3
SMO347G0131 Selaginella moellendorffii HOM05D008523 ORTHO05D010723 7.0e-293 1010.7 863 61.0
CBR_g66722 Chara braunii HOM05D008523 ORTHO05D010723 4.6e-276 954.9 875 56.8
SEGI_05562 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 6.2e-140 502.7 403 60.8
SEGI_03454 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 7.9e-127 459.1 388 60.6
PRCOL_00001244 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 5.3e-123 446.4 737 38.9
PRCOL_00000745 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 1.7e-121 441.4 785 37.6
MCO15G259 Micromonas commoda HOM05D008523 ORTHO05D010723 3.7e-92 344.0 777 32.4
COL.COLO4_00988 Corchorus olitorius HOM05D008523 ORTHO05D010723 2.0e-66 258.5 607 31.8
TAR381G0860 Trochodendron aralioides HOM05D008523 ORTHO05D010723 5.9e-66 256.9 206 63.1
Nn1g08698 Nelumbo nucifera HOM05D008523 ORTHO05D010723 3.9e-65 254.2 182 68.7
Dinv40375 Davidia involucrata HOM05D008523 ORTHO05D010723 8.9e-62 243.0 192 64.1
Aqoxy6G00203 Aquilegia oxysepala HOM05D008523 ORTHO05D010723 2.2e-60 238.4 207 58.9
PSO170G6317 Papaver somniferum HOM05D008523 ORTHO05D010723 1.2e-58 232.6 181 63.5
GSVIVG01008905001 Vitis vinifera HOM05D008523 ORTHO05D010723 3.5e-58 231.1 182 62.6
Atru.chr13.1404 Acer truncatum HOM05D008523 ORTHO05D010723 6.0e-58 230.3 173 66.5
Rhsim07G0163700 Rhododendron simsii HOM05D008523 ORTHO05D010723 1.0e-57 229.6 185 61.6
MD08G1168300 Malus domestica HOM05D008523 ORTHO05D010723 8.6e-57 226.5 172 63.4
Migut.C01156 Erythranthe guttata HOM05D008523 ORTHO05D010723 1.1e-56 226.1 180 63.3
PGR042G3956 Punica granatum HOM05D008523 ORTHO05D010723 1.8e-54 218.8 184 58.7
HPP92_027951 Vanilla planifolia HOM05D008523 ORTHO05D010723 3.4e-53 214.5 173 59.0
HPP92_005840 Vanilla planifolia HOM05D008523 ORTHO05D010723 7.5e-53 213.4 175 60.0
HPP92_005846 Vanilla planifolia HOM05D008523 ORTHO05D010723 2.9e-52 211.5 175 59.4
CANSAT25G1340 Cannabis sativa HOM05D008523 ORTHO05D010723 4.1e-51 207.6 170 60.0
Thecc.08G120800 Theobroma cacao HOM05D008523 ORTHO05D010723 2.0e-45 188.7 139 65.5
Dinv01183 Davidia involucrata HOM05D008523 ORTHO05D010723 1.1e-40 172.9 137 63.5
Ciclev10003859m.g Citrus clementina HOM05D008523 ORTHO05D010723 2.5e-40 171.8 183 52.5
QL05p051451 Quercus lobata HOM05D000038 ORTHO05D000423 3.6e-39 167.9 127 66.9
MBI03_g26564_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 5.8e-37 160.6 118 66.1
SEGI_37575 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 7.6e-37 160.2 147 55.8
Nitab4.5_0004554g0040 Nicotiana tabacum HOM05D000038 ORTHO05D000423 1.3e-36 159.5 136 61.0
Nitab4.5_0010364g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 1.3e-36 159.5 136 61.0
Cfa015985 Carpinus fangiana HOM05D008523 ORTHO05D000423 2.2e-36 158.7 136 60.3
Peaxi162Scf00451g00722 Petunia axillaris HOM05D000038 ORTHO05D000423 2.2e-36 158.7 135 60.0
QL05p051411 Quercus lobata HOM05D000038 ORTHO05D000423 8.4e-36 156.8 145 58.6
Gorai.010G048500 Gossypium raimondii HOM05D000038 ORTHO05D000423 2.1e-34 152.1 139 57.6
Solyc11g013090.2 Solanum lycopersicum HOM05D008523 ORTHO05D010723 6.0e-34 150.6 137 59.1
Cpa.g.sc36.25 Carica papaya HOM05D008523 ORTHO05D010723 3.3e-32 144.8 107 65.4
SalBow7G0429 Salvia bowleyana HOM05D008523 ORTHO05D010723 8.1e-31 140.2 155 52.3
Haze_00486 Corylus avellana HOM05D008523 ORTHO05D010723 9.0e-30 136.7 117 59.8
SEGI_08517 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 9.0e-30 136.7 125 48.8
PGSC0003DMG402000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 2.0e-29 135.6 132 55.3
MBI03_g05982_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 9.3e-27 126.7 139 50.4
Gohir.A06G042301 Gossypium hirsutum HOM05D008523 ORTHO05D010723 3.9e-25 121.3 109 58.7
CSS0029332 Camellia sinensis var. sinensis HOM05D008523 ORTHO05D010723 8.7e-25 120.2 94 61.7
SalBow7G3869 Salvia bowleyana HOM05D008523 ORTHO05D010723 4.8e-23 114.4 155 43.9
Ca_29195_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 7.4e-16 90.5 180 33.3
HPP92_009511 Vanilla planifolia HOM05D008523 ORTHO05D010723 2.8e-15 88.6 66 63.6
Ca_31317_v3 Cicer arietinum L. HOM05D008523 ORTHO05D010723 1.8e-14 85.9 96 43.8
Gohir.D06G043400 Gossypium hirsutum HOM05D000038 ORTHO05D000423 1.6e-10 72.8 46 71.7
Gohir.A06G042401 Gossypium hirsutum HOM05D000038 ORTHO05D000423 3.5e-10 71.6 49 67.3
COL.COLO4_07273 Corchorus olitorius HOM05D000038 ORTHO05D000423 1.0e-09 70.1 47 63.8
Pp3s92_20 Physcomitrium patens HOM05D001287 ORTHO05D001226 1.8e-09 69.3 291 22.7
PGSC0003DMG401000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 3.0e-09 68.6 47 68.1
Sopen11g007810 Solanum pennellii HOM05D000038 ORTHO05D000423 5.1e-09 67.8 46 69.6
Haze_00484 Corylus avellana HOM05D008523 ORTHO05D010723 8.7e-09 67.0 55 54.5
SEGI_39238 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 1.5e-08 66.2 84 44.0


User provided reference genes

Program Settings