Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_2470 Physcomitrium patens HOM05D010866 ORTHO05D001672 3.7e-171 604.7 296 100.0
Pp3c11_2407 Physcomitrium patens HOM05D010866 ORTHO05D001672 1.5e-52 210.7 103 100.0
Pp3c11_2480 Physcomitrium patens HOM05D010866 ORTHO05D001672 1.5e-52 210.7 103 100.0
Pp3s51_120 Physcomitrium patens HOM05D010866 ORTHO05D001672 2.3e-48 196.8 228 54.8
Pp3s51_220 Physcomitrium patens HOM05D010866 ORTHO05D001672 2.3e-48 196.8 228 54.8
Pp3s51_280 Physcomitrium patens HOM05D010866 ORTHO05D001672 2.3e-48 196.8 228 54.8
Pp3c11_3860 Physcomitrium patens HOM05D010866 ORTHO05D001672 1.3e-43 181.0 218 53.2
Pp3s51_150 Physcomitrium patens HOM05D010866 ORTHO05D001672 1.3e-43 181.0 218 53.2
Pp3s51_180 Physcomitrium patens HOM05D010866 ORTHO05D001672 1.3e-43 181.0 218 53.2
Pp3s51_240 Physcomitrium patens HOM05D010866 ORTHO05D001672 1.3e-43 181.0 218 53.2
Pp3s51_270 Physcomitrium patens HOM05D010866 ORTHO05D001672 1.3e-43 181.0 218 53.2
Pp3s51_30 Physcomitrium patens HOM05D010866 ORTHO05D001672 1.3e-43 181.0 218 53.2
Pp3c2_27070 Physcomitrium patens HOM05D010866 ORTHO05D001672 8.2e-38 161.8 265 43.4
Pp3c11_3900 Physcomitrium patens HOM05D010866 ORTHO05D001672 1.4e-32 144.4 77 84.4
Pp3c19_2080 Physcomitrium patens HOM05D010866 ORTHO05D017103 5.4e-13 79.3 86 47.7
Pp3c22_7970 Physcomitrium patens HOM05D010866 ORTHO05D001672 1.9e-10 70.9 74 41.9
Atru.chr12.268 Acer truncatum HOM05D001751 ORTHO05D001672 1.6e-09 67.8 89 37.1
DCAR_011756 Daucus carota HOM05D001751 ORTHO05D001672 4.7e-09 66.2 89 36.0
vmacro10195 Vaccinium macrocarpon HOM05D001751 ORTHO05D001672 4.7e-09 66.2 82 36.6
Sabra08G0045400 Salix brachista HOM05D001751 ORTHO05D001672 8.0e-09 65.5 89 37.1
Sabra10G0150900 Salix brachista HOM05D001751 ORTHO05D001672 1.0e-08 65.1 89 36.0
Lsat_1_v5_gn_2_117100 Lactuca sativa HOM05D001751 ORTHO05D001672 2.3e-08 63.9 84 36.9
Prupe.2G242800 Prunus persica HOM05D001751 ORTHO05D001672 2.3e-08 63.9 82 40.2
QL08p062055 Quercus lobata HOM05D001751 ORTHO05D001672 2.3e-08 63.9 87 35.6
TWI53G2099 Tripterygium wilfordii HOM05D001751 ORTHO05D001672 2.3e-08 63.9 67 44.8
Thecc.10G031200 Theobroma cacao HOM05D001751 ORTHO05D001672 3.0e-08 63.5 84 38.1
CANSAT56G0758 Cannabis sativa HOM05D001751 ORTHO05D001672 4.0e-08 63.2 96 36.5
Ciclev10033080m.g Citrus clementina HOM05D001751 ORTHO05D001672 4.0e-08 63.2 82 36.6
TWI74G0455 Tripterygium wilfordii HOM05D001751 ORTHO05D001672 4.0e-08 63.2 64 45.3
vmacro10196 Vaccinium macrocarpon HOM05D001751 ORTHO05D001672 4.0e-08 63.2 82 34.1
Zm00001eb090910 Zea mays HOM05D001751 ORTHO05D001672 4.0e-08 63.2 92 35.9
GSVIVG01016435001 Vitis vinifera HOM05D001751 ORTHO05D001672 5.2e-08 62.8 82 36.6
Duzib106G0792 Durio zibethinus HOM05D001751 ORTHO05D001672 6.8e-08 62.4 84 34.5
Duzib114G0795 Durio zibethinus HOM05D001751 ORTHO05D001672 6.8e-08 62.4 84 35.7
Os05g0160300 Oryza sativa ssp. japonica HOM05D001751 ORTHO05D001672 6.8e-08 62.4 84 36.9
Thecc.02G300800 Theobroma cacao HOM05D001751 ORTHO05D001672 6.8e-08 62.4 64 45.3
ATR0598G295 Amborella trichopoda HOM05D001751 ORTHO05D001672 8.9e-08 62.0 89 34.8
Ciclev10018228m.g Citrus clementina HOM05D001751 ORTHO05D001672 8.9e-08 62.0 72 37.5
Glyma.03G073500 Glycine max HOM05D001751 ORTHO05D001672 8.9e-08 62.0 85 30.6
Medtr7g065210 Medicago truncatula HOM05D001751 ORTHO05D001672 8.9e-08 62.0 85 35.3
QL08p062035 Quercus lobata HOM05D001751 ORTHO05D001672 8.9e-08 62.0 82 36.6
Duzib251G0297 Durio zibethinus HOM05D001751 ORTHO05D001672 1.2e-07 61.6 91 36.3
Potri.008G061800 Populus trichocarpa HOM05D001751 ORTHO05D001672 1.2e-07 61.6 85 35.3
Sc07g0006970 Simmondsia chinensis HOM05D001751 ORTHO05D001672 1.2e-07 61.6 85 37.6
ECA238G4580 Erigeron canadensis HOM05D001751 ORTHO05D001672 1.5e-07 61.2 82 37.8
Gohir.A12G153300 Gossypium hirsutum HOM05D001751 ORTHO05D001672 1.5e-07 61.2 64 43.8
Gohir.D12G156700 Gossypium hirsutum HOM05D001751 ORTHO05D001672 1.5e-07 61.2 64 43.8
Gorai.008G169400 Gossypium raimondii HOM05D001751 ORTHO05D001672 1.5e-07 61.2 64 43.8
Lj3A858G36 Lonicera japonica HOM05D001751 ORTHO05D001672 1.5e-07 61.2 81 37.0
Lalb_Chr13g0291901 Lupinus albus HOM05D001751 ORTHO05D001672 1.5e-07 61.2 85 31.8
Manes.07G122502 Manihot esculenta HOM05D001751 ORTHO05D001672 1.5e-07 61.2 85 36.5
CARHR207260 Cardamine hirsuta HOM05D001751 ORTHO05D001672 2.0e-07 60.8 95 36.8
Duzib106G0083 Durio zibethinus HOM05D001751 ORTHO05D001672 2.0e-07 60.8 84 34.5
Duzib106G1524 Durio zibethinus HOM05D001751 ORTHO05D001672 2.0e-07 60.8 81 33.3
Gohir.A05G346800 Gossypium hirsutum HOM05D001751 ORTHO05D001672 2.0e-07 60.8 82 36.6
Gorai.012G073600 Gossypium raimondii HOM05D001751 ORTHO05D001672 2.0e-07 60.8 82 36.6
HanXRQChr07g0202031 Helianthus annuus HOM05D001751 ORTHO05D001672 2.0e-07 60.8 82 37.8
Lsat_1_v5_gn_9_63001 Lactuca sativa HOM05D001751 ORTHO05D001672 2.0e-07 60.8 82 36.6
Lalb_Chr03g0042711 Lupinus albus HOM05D001751 ORTHO05D001672 2.0e-07 60.8 85 36.5
Phvul.008G113900 Phaseolus vulgaris HOM05D001751 ORTHO05D001672 2.0e-07 60.8 85 35.3
SalBow5G4935 Salvia bowleyana HOM05D001751 ORTHO05D001672 2.0e-07 60.8 82 34.1
CSS0048241 Camellia sinensis var. sinensis HOM05D001751 ORTHO05D001672 2.6e-07 60.5 82 37.8
ECA238G2034 Erigeron canadensis HOM05D001360 ORTHO05D001672 2.6e-07 60.5 82 37.8
Oeu024855.1 Olea europaea HOM05D001751 ORTHO05D001672 2.6e-07 60.5 77 37.7
ATR0322G001 Amborella trichopoda HOM05D001751 ORTHO05D001672 3.4e-07 60.1 89 33.7
MSTRG.254 Avicennia marina HOM05D001751 ORTHO05D001672 3.4e-07 60.1 84 35.7
EL10Ac2g04670 Beta vulgaris HOM05D001751 ORTHO05D001672 3.4e-07 60.1 88 34.1
AUR62012164 Chenopodium quinoa HOM05D001751 ORTHO05D001672 3.4e-07 60.1 82 37.8
FvH4_4g35921 Fragaria vesca HOM05D001751 ORTHO05D001672 3.4e-07 60.1 64 42.2
FAN07G2128 Fragaria x ananassa HOM05D001751 ORTHO05D001672 3.4e-07 60.1 64 42.2
FAN12G2922 Fragaria x ananassa HOM05D001751 ORTHO05D001672 3.4e-07 60.1 64 42.2
FAN17G1096 Fragaria x ananassa HOM05D001751 ORTHO05D001672 3.4e-07 60.1 64 42.2
FAN22G0283 Fragaria x ananassa HOM05D001751 ORTHO05D001672 3.4e-07 60.1 64 42.2
Oeu035127.1 Olea europaea HOM05D001751 ORTHO05D001672 3.4e-07 60.1 77 37.7
Potri.010G196300 Populus trichocarpa HOM05D001751 ORTHO05D001672 3.4e-07 60.1 85 35.3
Duzib106G0665 Durio zibethinus HOM05D001751 ORTHO05D001672 4.4e-07 59.7 84 34.5
Glyma.07G139400 Glycine max HOM05D001751 ORTHO05D001672 4.4e-07 59.7 85 32.9
Glyma.18G190000 Glycine max HOM05D001751 ORTHO05D001672 4.4e-07 59.7 85 32.9
Ah.03g147300 Amaranthus hybridus HOM05D001751 ORTHO05D001672 5.7e-07 59.3 64 42.2
FAN03G2801 Fragaria x ananassa HOM05D001751 ORTHO05D001672 5.7e-07 59.3 82 36.6
Gohir.D04G065400 Gossypium hirsutum HOM05D001751 ORTHO05D001672 5.7e-07 59.3 82 35.4
MBI05_g02669_MAGBIO Magnolia biondii HOM05D002124 ORTHO05D009549 5.7e-07 59.3 74 36.5
RcHm_v2.0_Chr1g0368841 Rosa chinensis HOM05D001751 ORTHO05D001672 5.7e-07 59.3 90 36.7
TWI74G1225 Tripterygium wilfordii HOM05D001751 ORTHO05D001672 5.7e-07 59.3 77 36.4
Zm00001eb083610 Zea mays HOM05D001751 ORTHO05D001672 5.7e-07 59.3 103 34.0
Atru.chr11.977 Acer truncatum HOM05D001751 ORTHO05D001672 7.5e-07 58.9 65 43.1
ATR0210G004 Amborella trichopoda HOM05D001751 ORTHO05D001672 7.5e-07 58.9 82 36.6
Cpa.g.sc17.158 Carica papaya HOM05D001751 ORTHO05D001672 7.5e-07 58.9 77 36.4
Duzib241G0004 Durio zibethinus HOM05D001751 ORTHO05D001672 7.5e-07 58.9 84 33.3
Hma1.2p1_0039F.1_g024900 Hydrangea macrophylla HOM05D001751 ORTHO05D001672 7.5e-07 58.9 92 30.4
Mapoly0005s0134 Marchantia polymorpha HOM05D010866 ORTHO05D008854 7.5e-07 58.9 78 38.5
TAR633G1255 Trochodendron aralioides HOM05D001751 ORTHO05D001672 7.5e-07 58.9 82 35.4
VMungo1383G3336 Vigna mungo HOM05D001751 ORTHO05D001672 7.5e-07 58.9 85 34.1
Aa31sc88G70 Aethionema arabicum HOM05D001751 ORTHO05D001672 9.8e-07 58.5 69 39.1
CiPaw.10G149500 Carya illinoinensis HOM05D001751 ORTHO05D001672 9.8e-07 58.5 77 37.7
Duzib106G0808 Durio zibethinus HOM05D001751 ORTHO05D001672 9.8e-07 58.5 82 34.1
Gohir.A01G144500 Gossypium hirsutum HOM05D001751 ORTHO05D001672 9.8e-07 58.5 64 40.6
Gohir.D01G136000 Gossypium hirsutum HOM05D001751 ORTHO05D001672 9.8e-07 58.5 64 40.6
Gohir.D01G136100 Gossypium hirsutum HOM05D001751 ORTHO05D001672 9.8e-07 58.5 64 40.6
Gorai.002G170100 Gossypium raimondii HOM05D001751 ORTHO05D001672 9.8e-07 58.5 64 40.6
HanXRQChr14g0458461 Helianthus annuus HOM05D001751 ORTHO05D001672 9.8e-07 58.5 90 36.7
Nitab4.5_0003241g0030 Nicotiana tabacum HOM05D001751 ORTHO05D001672 9.8e-07 58.5 81 35.8
TAR636G2247 Trochodendron aralioides HOM05D001751 ORTHO05D001672 9.8e-07 58.5 82 37.8
AUR62022801 Chenopodium quinoa HOM05D001751 ORTHO05D001672 1.3e-06 58.2 93 33.3
COL.COLO4_27552 Corchorus olitorius HOM05D001751 ORTHO05D001672 1.3e-06 58.2 64 40.6
Nn2g11291 Nelumbo nucifera HOM05D001751 ORTHO05D001672 1.3e-06 58.2 82 34.1
Sabra08G0107000 Salix brachista HOM05D001751 ORTHO05D001672 1.3e-06 58.2 64 43.8
Sabra10G0073100 Salix brachista HOM05D001751 ORTHO05D001672 1.3e-06 58.2 64 43.8
Gorai.002G170000 Gossypium raimondii HOM05D001751 ORTHO05D001672 1.7e-06 57.8 64 40.6
Oeu044065.1 Olea europaea HOM05D001751 ORTHO05D001672 1.7e-06 57.8 64 40.6
Os01g0849000 Oryza sativa ssp. japonica HOM05D001751 ORTHO05D001672 1.7e-06 57.8 74 40.5
Thecc.05G028500 Theobroma cacao HOM05D001751 ORTHO05D001672 1.7e-06 57.8 82 34.1
Thecc.05G028800 Theobroma cacao HOM05D001751 ORTHO05D001672 1.7e-06 57.8 82 34.1
Zm00001eb147950 Zea mays HOM05D001751 ORTHO05D001672 1.7e-06 57.8 90 38.9
Haze_10750 Corylus avellana HOM05D001751 ORTHO05D001672 2.2e-06 57.4 64 39.1
Duzib093G0954 Durio zibethinus HOM05D001751 ORTHO05D001672 2.2e-06 57.4 82 35.4
Lj3g0003791 Lotus japonicus HOM05D001751 ORTHO05D001672 2.2e-06 57.4 85 31.8
CANSAT78G0417 Cannabis sativa HOM05D001751 ORTHO05D001672 2.9e-06 57.0 64 39.1
MELO3C008252.2 Cucumis melo HOM05D001751 ORTHO05D001672 2.9e-06 57.0 78 35.9
ECA238G1249 Erigeron canadensis HOM05D001751 ORTHO05D001672 2.9e-06 57.0 64 40.6
Potri.008G141000 Populus trichocarpa HOM05D001751 ORTHO05D001672 2.9e-06 57.0 73 41.1
PGR004G0216 Punica granatum HOM05D001751 ORTHO05D001672 2.9e-06 57.0 81 34.6
THA.LOC104823401 Tarenaya hassleriana HOM05D001751 ORTHO05D001672 2.9e-06 57.0 77 36.4
CiPaw.06G057800 Carya illinoinensis HOM05D001751 ORTHO05D001672 3.7e-06 56.6 73 38.4
Ciclev10013132m.g Citrus clementina HOM05D001751 ORTHO05D001672 3.7e-06 56.6 82 34.1
Gohir.D09G156700 Gossypium hirsutum HOM05D001751 ORTHO05D001672 3.7e-06 56.6 82 34.1
Gorai.006G178200 Gossypium raimondii HOM05D001751 ORTHO05D001672 3.7e-06 56.6 82 34.1
MD07G1207500 Malus domestica HOM05D001751 ORTHO05D001672 3.7e-06 56.6 82 36.6
MD12G1154900 Malus domestica HOM05D001751 ORTHO05D001672 3.7e-06 56.6 82 36.6
PSO421G0715 Papaver somniferum HOM05D001751 ORTHO05D001672 3.7e-06 56.6 79 36.7
Prupe.2G242600 Prunus persica HOM05D001751 ORTHO05D001672 3.7e-06 56.6 89 34.8
Sed0012065 Sechium edule HOM05D001751 ORTHO05D001672 3.7e-06 56.6 78 35.9
THA.LOC104806540 Tarenaya hassleriana HOM05D001751 ORTHO05D001672 3.7e-06 56.6 77 36.4
TWI77G0303 Tripterygium wilfordii HOM05D001751 ORTHO05D001672 3.7e-06 56.6 92 33.7
Actinidia37485 Actinidia chinensis HOM05D001751 ORTHO05D001672 4.9e-06 56.2 64 42.2
arahy.Tifrunner.gnm1.ann1.74J18E Arachis hypogaea HOM05D001751 ORTHO05D001672 4.9e-06 56.2 85 34.1
MSTRG.253 Avicennia marina HOM05D001751 ORTHO05D001672 4.9e-06 56.2 77 36.4
Cfa021279 Carpinus fangiana HOM05D001751 ORTHO05D001672 4.9e-06 56.2 84 34.5
ClCG01G006880 Citrullus lanatus HOM05D001751 ORTHO05D001672 4.9e-06 56.2 64 39.1
Ciclev10013135m.g Citrus clementina HOM05D001751 ORTHO05D001672 4.9e-06 56.2 92 33.7
MELO3C005225.2 Cucumis melo HOM05D001751 ORTHO05D001672 4.9e-06 56.2 73 38.4
CsaV3_5G017280 Cucumis sativus L. HOM05D001751 ORTHO05D001672 4.9e-06 56.2 73 38.4
FvH4_7g23600 Fragaria vesca HOM05D001751 ORTHO05D001672 4.9e-06 56.2 82 34.1
FAN06G4386 Fragaria x ananassa HOM05D001751 ORTHO05D001672 4.9e-06 56.2 82 34.1
FAN06G4821 Fragaria x ananassa HOM05D001751 ORTHO05D001672 4.9e-06 56.2 82 34.1
Manes.09G098600 Manihot esculenta HOM05D001751 ORTHO05D001672 4.9e-06 56.2 84 33.3
Rhsim09G0082600 Rhododendron simsii HOM05D001751 ORTHO05D001672 4.9e-06 56.2 64 42.2
RcHm_v2.0_Chr3g0464631 Rosa chinensis HOM05D001751 ORTHO05D001672 4.9e-06 56.2 77 39.0
Sp5g08420 Schrenkiella parvula HOM05D001751 ORTHO05D001672 4.9e-06 56.2 82 35.4
Sopen03g027300 Solanum pennellii HOM05D001751 ORTHO05D001672 4.9e-06 56.2 81 33.3
ClCG11G006530 Citrullus lanatus HOM05D001751 ORTHO05D001672 6.4e-06 55.8 78 34.6
COL.COLO4_27389 Corchorus olitorius HOM05D001751 ORTHO05D001672 6.4e-06 55.8 93 37.6
Gohir.A09G161000 Gossypium hirsutum HOM05D001751 ORTHO05D001672 6.4e-06 55.8 77 35.1
Potri.010G100600 Populus trichocarpa HOM05D001751 ORTHO05D001672 6.4e-06 55.8 64 42.2
Prupe.6G264700 Prunus persica HOM05D001751 ORTHO05D001672 6.4e-06 55.8 82 35.4
Sed0015379 Sechium edule HOM05D001751 ORTHO05D001672 6.4e-06 55.8 64 40.6
Actinidia28656 Actinidia chinensis HOM05D001751 ORTHO05D001672 8.3e-06 55.5 77 33.8
Dinv07027 Davidia involucrata HOM05D001751 ORTHO05D001672 8.3e-06 55.5 64 40.6
MD01G1141800 Malus domestica HOM05D001360 ORTHO05D001231 8.3e-06 55.5 76 38.2


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