Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 1.0e-145 520.0 261 100.0
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 3.9e-76 288.9 254 63.8
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 1.4e-52 210.7 237 50.2
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 6.8e-52 208.4 243 49.4
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 1.5e-51 207.2 246 50.4
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 2.6e-51 206.5 244 50.0
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 2.6e-51 206.5 242 50.0
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 4.4e-51 205.7 245 47.3
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 5.7e-51 205.3 228 50.4
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 5.7e-51 205.3 250 49.2
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 9.8e-51 204.5 244 49.6
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 1.7e-50 203.8 241 49.8
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 2.8e-50 203.0 257 47.1
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 2.8e-50 203.0 249 47.4
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 3.7e-50 202.6 265 46.0
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 3.7e-50 202.6 245 49.4
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 4.8e-50 202.2 237 49.8
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 6.3e-50 201.8 234 50.0
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 6.3e-50 201.8 249 48.6
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 6.3e-50 201.8 243 49.8
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 6.3e-50 201.8 249 48.6
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 6.3e-50 201.8 249 48.6
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 6.3e-50 201.8 243 49.8
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 6.3e-50 201.8 236 50.4
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 6.3e-50 201.8 272 44.9
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 6.3e-50 201.8 243 49.4
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 8.3e-50 201.4 245 48.6
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 8.3e-50 201.4 237 48.9
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 1.1e-49 201.1 249 48.6
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 1.1e-49 201.1 236 50.4
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 1.8e-49 200.3 243 49.4
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 1.8e-49 200.3 243 49.8
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 2.4e-49 199.9 243 49.4
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 2.4e-49 199.9 242 47.9
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 2.4e-49 199.9 236 50.4
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 3.1e-49 199.5 243 48.1
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 3.1e-49 199.5 242 50.0
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 4.1e-49 199.1 248 48.0
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 4.1e-49 199.1 248 48.0
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 5.4e-49 198.7 255 46.7
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 5.4e-49 198.7 242 49.2
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 5.4e-49 198.7 226 50.0
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 7.0e-49 198.4 236 49.6
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 7.0e-49 198.4 244 48.8
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 7.0e-49 198.4 246 47.2
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 7.0e-49 198.4 242 47.1
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 9.1e-49 198.0 243 48.1
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 9.1e-49 198.0 242 47.9
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 9.1e-49 198.0 245 47.8
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 9.1e-49 198.0 236 48.7
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 1.2e-48 197.6 244 47.1
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 1.2e-48 197.6 237 48.9
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 1.2e-48 197.6 243 49.4
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 1.2e-48 197.6 246 48.4
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 1.6e-48 197.2 243 49.4
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 1.6e-48 197.2 258 45.7
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 1.6e-48 197.2 236 49.2
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 2.0e-48 196.8 224 48.2
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 2.0e-48 196.8 255 47.1
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 2.0e-48 196.8 243 47.3
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 2.0e-48 196.8 244 47.1
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 2.7e-48 196.4 208 52.4
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 2.7e-48 196.4 242 47.5
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 2.7e-48 196.4 236 47.0
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 2.7e-48 196.4 238 49.2
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 2.7e-48 196.4 236 49.2
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 2.7e-48 196.4 243 49.0
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 3.5e-48 196.1 221 52.5
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 3.5e-48 196.1 242 47.5
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 3.5e-48 196.1 245 47.8
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 3.5e-48 196.1 236 48.3
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 4.5e-48 195.7 243 46.9
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 4.5e-48 195.7 236 46.6
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 4.5e-48 195.7 259 46.3
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 4.5e-48 195.7 236 48.3
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 5.9e-48 195.3 254 46.9
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 7.7e-48 194.9 231 48.1
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 1.0e-47 194.5 236 47.9
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 1.0e-47 194.5 242 47.1
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 1.0e-47 194.5 229 48.9
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 1.3e-47 194.1 259 45.2
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 1.7e-47 193.7 231 47.2
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.7e-47 193.7 241 47.3
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 1.7e-47 193.7 209 51.7
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 2.2e-47 193.4 236 45.3
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 2.2e-47 193.4 236 48.7
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 2.2e-47 193.4 254 46.1
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 2.9e-47 193.0 243 46.9
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 2.9e-47 193.0 236 47.9
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 3.8e-47 192.6 236 47.5
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 3.8e-47 192.6 243 46.5
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 5.0e-47 192.2 237 48.1
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 5.0e-47 192.2 231 47.6
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 5.0e-47 192.2 231 48.1
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 6.5e-47 191.8 245 47.3
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 6.5e-47 191.8 231 48.1
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 8.5e-47 191.4 232 48.3
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 1.1e-46 191.0 244 47.5
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 1.1e-46 191.0 231 46.3
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 1.1e-46 191.0 245 46.9
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.5e-46 190.7 256 46.5
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 1.5e-46 190.7 236 47.9
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 1.5e-46 190.7 247 46.6
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 1.5e-46 190.7 249 48.2
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 1.5e-46 190.7 245 46.5
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 1.5e-46 190.7 236 47.0
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 1.9e-46 190.3 245 46.5
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 1.9e-46 190.3 231 47.2
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 2.5e-46 189.9 231 47.2
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 2.5e-46 189.9 210 50.0
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 3.2e-46 189.5 245 46.1
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 7.2e-46 188.3 236 45.8
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 7.2e-46 188.3 229 47.2
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 7.2e-46 188.3 232 47.0
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 9.4e-46 188.0 245 46.9
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 9.4e-46 188.0 236 47.0
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 4.7e-45 185.7 209 49.8
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 4.7e-45 185.7 207 50.2
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 6.1e-45 185.3 209 50.2
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 6.1e-45 185.3 238 47.1
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 2.3e-44 183.3 232 47.0
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 5.2e-44 182.2 254 44.1
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 6.8e-44 181.8 275 43.3
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 8.8e-44 181.4 207 49.3
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 2.2e-42 176.8 223 47.5
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 3.1e-41 172.9 243 44.4
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 4.1e-41 172.6 264 40.9
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 5.4e-41 172.2 235 44.7
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 7.0e-41 171.8 213 48.8
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 2.9e-39 166.4 231 43.3
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.3e-38 162.9 229 45.0
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 2.1e-37 160.2 258 42.6
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 8.0e-37 158.3 178 48.9
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 2.3e-36 156.8 178 48.9
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.2e-33 146.4 175 47.4
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.2e-33 146.4 175 47.4
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 1.0e-31 141.4 318 34.6
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 5.6e-30 135.6 136 55.9
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 2.8e-29 133.3 156 47.4
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 5.2e-28 129.0 195 43.6
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 5.8e-27 125.6 163 47.9
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 6.4e-26 122.1 175 41.7
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 1.1e-25 121.3 166 42.8
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 2.0e-24 117.1 139 46.0
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 4.6e-24 115.9 139 45.3
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 1.4e-20 104.4 131 42.7
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.6e-16 90.9 72 54.2
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 4.6e-16 89.4 225 28.0
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 1.0e-15 88.2 197 34.5
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 1.0e-15 88.2 72 54.2
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 8.6e-15 85.1 77 59.7
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 1.5e-14 84.3 67 62.7
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 3.3e-14 83.2 113 42.5
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 2.9e-10 70.1 89 51.7
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 3.2e-09 66.6 119 34.5
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 4.1e-09 66.2 72 48.6
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 4.1e-09 66.2 72 48.6
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 1.1e-06 58.2 105 31.4
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 7.3e-06 55.5 59 55.9


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