Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 2.8e-260 901.7 568 100.0
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 6.7e-206 721.1 570 81.4
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 1.6e-98 364.4 435 56.3
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 5.0e-92 342.8 474 49.2
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 8.5e-92 342.0 531 46.1
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 8.5e-92 342.0 472 48.9
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 3.2e-91 340.1 520 46.3
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 5.5e-91 339.3 475 49.9
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 9.4e-91 338.6 529 48.2
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 3.6e-90 336.7 470 49.1
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 8.0e-90 335.5 525 49.1
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 1.8e-89 334.3 531 46.7
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.2e-88 331.6 521 44.5
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 1.2e-88 331.6 522 46.2
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 1.5e-88 331.3 523 46.1
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 2.6e-88 330.5 560 43.4
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 2.6e-88 330.5 526 46.2
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 3.4e-88 330.1 523 47.6
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 4.4e-88 329.7 525 45.5
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 4.4e-88 329.7 531 45.0
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 9.7e-88 328.6 535 45.2
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.7e-87 327.8 521 46.4
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.2e-87 327.4 535 45.4
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 2.2e-87 327.4 524 46.4
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 3.7e-87 326.6 462 50.0
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 3.7e-87 326.6 462 47.4
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 1.1e-86 325.1 526 45.6
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 1.4e-86 324.7 526 44.9
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 1.8e-86 324.3 520 44.6
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 4.1e-86 323.2 528 44.5
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 7.0e-86 322.4 524 46.4
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 9.1e-86 322.0 529 44.8
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 1.6e-85 321.2 459 48.6
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 1.6e-85 321.2 459 48.6
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 3.5e-85 320.1 524 45.0
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 3.5e-85 320.1 394 52.0
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 1.0e-84 318.5 545 43.1
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 1.0e-84 318.5 558 43.4
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 2.2e-84 317.4 522 47.5
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 2.2e-84 317.4 467 47.5
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 6.5e-84 315.8 522 44.4
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 6.5e-84 315.8 540 44.8
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 8.5e-84 315.5 521 44.5
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 1.1e-83 315.1 536 45.0
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.9e-83 314.3 521 45.3
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 2.5e-83 313.9 523 45.7
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 4.2e-83 313.2 458 47.6
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 5.5e-83 312.8 463 47.1
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 7.2e-83 312.4 535 44.1
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 9.4e-83 312.0 405 50.4
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 9.4e-83 312.0 521 45.3
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 2.1e-82 310.8 526 43.9
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 4.7e-82 309.7 526 45.1
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 6.1e-82 309.3 521 45.7
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 6.1e-82 309.3 466 47.0
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 8.0e-82 308.9 390 52.1
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 8.0e-82 308.9 522 44.4
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 8.0e-82 308.9 472 46.4
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 1.8e-81 307.8 532 44.5
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 1.8e-81 307.8 527 44.8
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 2.3e-81 307.4 457 47.7
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.3e-81 307.4 473 47.1
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 2.3e-81 307.4 552 42.6
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 3.0e-81 307.0 521 47.6
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 4.0e-81 306.6 462 47.4
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 4.0e-81 306.6 390 50.3
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 5.2e-81 306.2 532 43.0
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 5.2e-81 306.2 413 51.1
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 8.8e-81 305.4 526 43.7
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 1.5e-80 304.7 462 46.1
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 1.5e-80 304.7 463 47.5
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 3.4e-80 303.5 549 43.7
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 4.4e-80 303.1 527 44.6
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 7.5e-80 302.4 468 47.4
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 7.5e-80 302.4 465 47.3
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 9.8e-80 302.0 461 47.3
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.3e-79 301.6 462 45.7
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 1.7e-79 301.2 493 44.8
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 2.2e-79 300.8 521 41.5
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 2.2e-79 300.8 529 42.7
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 1.1e-78 298.5 526 43.5
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 1.4e-78 298.1 515 42.9
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 1.8e-78 297.7 524 43.3
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 2.4e-78 297.4 529 43.7
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 5.9e-77 292.7 465 46.5
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 5.9e-77 292.7 388 48.7
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 3.8e-76 290.0 520 42.9
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 5.5e-75 286.2 408 49.0
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 7.2e-75 285.8 536 43.1
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 4.7e-74 283.1 548 40.0
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 2.0e-64 251.1 524 38.4
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 2.3e-60 237.7 391 45.3
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 1.8e-57 228.0 486 37.2
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 4.9e-55 219.9 396 44.7
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 4.9e-55 219.9 255 54.5
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 5.4e-54 216.5 156 67.9
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 4.3e-51 206.8 527 34.5
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 1.3e-47 195.3 481 36.6
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 1.2e-45 188.7 130 71.5
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 6.0e-45 186.4 130 69.2
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 5.1e-44 183.3 468 34.8
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 5.2e-41 173.3 131 67.9
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 4.8e-34 150.2 314 48.7
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 1.1e-33 149.1 329 40.7
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 4.0e-33 147.1 378 37.8
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 3.4e-32 144.1 253 44.3
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.8e-31 140.6 84 75.0
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 3.2e-30 137.5 169 46.2
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 9.3e-30 136.0 483 35.4
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 1.2e-29 135.6 385 36.4
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 1.6e-29 135.2 317 40.7
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 4.6e-29 133.7 330 40.6
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 1.0e-28 132.5 390 36.4
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 3.9e-28 130.6 318 39.9
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 4.0e-25 120.6 307 35.8
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 6.9e-25 119.8 415 34.5
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 5.4e-22 110.2 302 37.1
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 5.6e-19 100.1 372 29.6
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.6e-18 98.6 72 63.9
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 2.8e-18 97.8 160 48.8
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 5.3e-17 93.6 66 66.7
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 6.9e-17 93.2 66 63.6
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 9.3e-14 82.8 64 64.1
Cre12.g498350 Chlamydomonas reinhardtii HOM05D005490 ORTHO05D006606 8.7e-12 76.3 289 28.7
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 8.7e-12 76.3 169 36.7
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 9.6e-11 72.8 260 32.7
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 6.2e-10 70.1 260 31.5
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 4.1e-09 67.4 165 33.9
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 1.2e-08 65.9 50 58.0
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.9e-07 61.2 42 66.7


User provided reference genes

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