Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_20880 Physcomitrium patens HOM05D005864 ORTHO05D006770 4.8e-147 524.6 294 100.0
Pp3c7_5470 Physcomitrium patens HOM05D005864 ORTHO05D006770 4.4e-76 288.9 268 62.3
Mapoly0099s0053 Marchantia polymorpha HOM05D005864 ORTHO05D006770 5.3e-29 132.5 286 37.4
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 2.0e-20 104.0 254 35.4
SEGI_09449 Sequoiadendron giganteum HOM05D005864 ORTHO05D006770 4.5e-20 102.8 275 32.7
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 9.4e-18 95.1 251 31.9
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 1.4e-16 91.3 249 34.9
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 3.9e-16 89.7 251 33.5
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 5.2e-16 89.4 241 33.6
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 1.1e-15 88.2 257 30.0
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 1.5e-15 87.8 244 39.8
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 2.0e-15 87.4 263 33.1
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 5.7e-15 85.9 241 31.5
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 7.4e-15 85.5 251 32.7
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 9.7e-15 85.1 270 33.0
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 9.7e-15 85.1 247 37.7
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 9.7e-15 85.1 238 31.9
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 1.3e-14 84.7 245 33.9
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 1.7e-14 84.3 240 33.8
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 3.7e-14 83.2 260 31.9
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 3.7e-14 83.2 244 34.8
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 1.1e-13 81.6 246 32.1
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 1.4e-13 81.3 240 32.5
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 1.8e-13 80.9 244 33.6
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 2.4e-13 80.5 243 33.3
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 2.4e-13 80.5 243 31.7
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 3.1e-13 80.1 287 31.4
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 4.1e-13 79.7 247 39.3
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 4.1e-13 79.7 241 32.8
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 5.3e-13 79.3 241 30.7
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 7.0e-13 79.0 241 32.8
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 7.0e-13 79.0 240 30.0
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 7.0e-13 79.0 246 31.3
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 1.6e-12 77.8 252 29.8
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 2.0e-12 77.4 239 31.8
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 2.0e-12 77.4 242 31.4
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 3.5e-12 76.6 244 30.7
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 4.5e-12 76.3 245 34.3
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 4.5e-12 76.3 244 31.1
AagrBONN_evm.TU.Sc2ySwM_369.130 Anthoceros agrestis HOM05D005864 ORTHO05D006770 5.9e-12 75.9 214 33.2
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 7.7e-12 75.5 240 35.4
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 7.7e-12 75.5 243 30.5
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 1.0e-11 75.1 238 30.7
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 1.0e-11 75.1 245 31.4
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 1.3e-11 74.7 242 30.6
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 2.2e-11 73.9 244 30.7
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 2.9e-11 73.6 240 32.1
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 3.8e-11 73.2 241 31.5
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 6.5e-11 72.4 243 34.2
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 8.5e-11 72.0 300 28.3
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 8.5e-11 72.0 260 28.8
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 1.1e-10 71.6 245 30.6
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.5e-10 70.5 263 28.9
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 4.2e-10 69.7 242 31.8
Gohir.A03G163800 Gossypium hirsutum HOM05D005864 ORTHO05D006770 4.2e-10 69.7 264 33.3
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 7.2e-10 68.9 195 33.3
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 7.2e-10 68.9 244 30.3
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 7.2e-10 68.9 252 36.9
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 9.4e-10 68.6 246 38.6
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 9.4e-10 68.6 240 30.8
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 1.2e-09 68.2 263 33.8
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 2.1e-09 67.4 239 29.3
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 4.7e-09 66.2 250 28.4
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 4.7e-09 66.2 246 31.7
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 1.0e-08 65.1 242 36.0
Gohir.D02G187200 Gossypium hirsutum HOM05D005864 ORTHO05D006770 1.0e-08 65.1 264 33.0
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.0e-08 65.1 192 32.8
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 1.8e-08 64.3 253 26.9
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 3.0e-08 63.5 242 31.0
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 6.7e-08 62.4 246 30.9
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 1.2e-07 61.6 284 31.0
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 1.2e-07 61.6 346 25.7
CDE05G1677 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 1.2e-07 61.6 50 62.0
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 1.5e-07 61.2 243 38.3
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 2.6e-07 60.5 237 26.6
Sed0020795 Sechium edule HOM05D005864 ORTHO05D006770 2.6e-07 60.5 190 34.2
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 4.4e-07 59.7 164 31.7
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 4.4e-07 59.7 252 28.2
TAR626G1271 Trochodendron aralioides HOM05D005864 ORTHO05D006770 5.7e-07 59.3 111 43.2
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 1.3e-06 58.2 226 29.6
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 1.3e-06 58.2 252 27.4
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-06 57.8 245 27.8
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 2.8e-06 57.0 34 70.6
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 4.8e-06 56.2 198 34.8
FAN09G4739 Fragaria x ananassa HOM05D005864 ORTHO05D006770 6.3e-06 55.8 73 49.3
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 8.2e-06 55.5 283 26.5


User provided reference genes

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