Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_20720 Physcomitrium patens HOM05D004930 ORTHO05D006531 2.6e-239 831.6 418 100.0
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis HOM05D004930 ORTHO05D006531 6.5e-105 385.2 274 69.3
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 4.2e-104 382.5 320 61.9
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 1.5e-101 374.0 284 66.2
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 2.2e-100 370.2 265 68.3
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 6.3e-100 368.6 265 67.9
FvH4_5g29680 Fragaria vesca HOM05D004930 ORTHO05D006531 1.4e-99 367.5 267 68.2
FAN13G1313 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.4e-99 367.5 267 68.2
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 1.4e-99 367.5 347 56.5
RcHm_v2.0_Chr7g0223001 Rosa chinensis HOM05D004930 ORTHO05D006531 2.4e-99 366.7 267 68.9
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 3.1e-99 366.3 276 66.7
Psat1g224280 Pisum sativum HOM05D004930 ORTHO05D006531 2.0e-98 363.6 276 65.2
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 2.0e-98 363.6 266 66.9
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 2.6e-98 363.2 268 66.4
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 4.5e-98 362.5 285 65.3
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 5.9e-98 362.1 273 66.3
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 5.9e-98 362.1 270 67.0
MD15G1421100 Malus domestica HOM05D004930 ORTHO05D006531 7.6e-98 361.7 266 66.2
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea HOM05D004930 ORTHO05D006531 1.0e-97 361.3 299 62.2
Glyma.15G047800 Glycine max HOM05D004930 ORTHO05D006531 1.0e-97 361.3 291 63.2
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 1.7e-97 360.5 276 64.9
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 1.7e-97 360.5 268 67.2
TPR.G2103 Trifolium pratense HOM05D004930 ORTHO05D006531 1.7e-97 360.5 276 64.9
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 2.2e-97 360.1 274 65.3
Glyma.08G184900 Glycine max HOM05D004930 ORTHO05D006531 2.2e-97 360.1 270 66.3
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 2.9e-97 359.8 288 63.2
Sp1g28730 Schrenkiella parvula HOM05D004930 ORTHO05D006531 2.9e-97 359.8 298 62.1
CANSAT11G0917 Cannabis sativa HOM05D004930 ORTHO05D006531 3.8e-97 359.4 278 65.1
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea HOM05D004930 ORTHO05D006531 5.0e-97 359.0 288 63.5
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 5.0e-97 359.0 268 66.0
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 5.0e-97 359.0 270 66.3
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 6.5e-97 358.6 288 64.6
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 6.5e-97 358.6 298 61.7
FAN04G2298 Fragaria x ananassa HOM05D004930 ORTHO05D006531 6.5e-97 358.6 279 65.2
FAN18G2930 Fragaria x ananassa HOM05D004930 ORTHO05D006531 6.5e-97 358.6 279 65.2
Phvul.006G213000 Phaseolus vulgaris HOM05D004930 ORTHO05D006531 6.5e-97 358.6 265 66.8
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 6.5e-97 358.6 268 66.0
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 1.1e-96 357.8 302 59.9
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.1e-96 357.8 312 60.3
Lj6g0009653 Lotus japonicus HOM05D004930 ORTHO05D006531 1.1e-96 357.8 273 64.8
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 1.1e-96 357.8 349 55.3
Cc02_g22360 Coffea canephora HOM05D004930 ORTHO05D006531 1.9e-96 357.1 266 66.2
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.9e-96 357.1 312 60.3
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 2.5e-96 356.7 289 61.6
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 2.5e-96 356.7 312 60.3
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 3.2e-96 356.3 261 68.6
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 3.2e-96 356.3 273 64.8
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 3.2e-96 356.3 328 57.6
Lalb_Chr18g0060861 Lupinus albus HOM05D004930 ORTHO05D006531 4.2e-96 355.9 268 66.0
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 4.2e-96 355.9 268 65.3
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 5.5e-96 355.5 260 68.8
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 5.5e-96 355.5 340 56.2
VMungo0540G0757 Vigna mungo HOM05D004930 ORTHO05D006531 5.5e-96 355.5 292 62.0
Ca_00086_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 7.2e-96 355.1 268 64.6
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 7.2e-96 355.1 268 66.0
BcaC07g37556 Brassica carinata HOM05D004930 ORTHO05D006531 9.3e-96 354.8 274 64.6
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 9.3e-96 354.8 251 68.5
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 1.6e-95 354.0 310 60.3
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 2.1e-95 353.6 268 65.3
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 2.7e-95 353.2 325 57.8
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 3.6e-95 352.8 354 56.5
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 4.6e-95 352.4 286 62.9
Medtr2g007650 Medicago truncatula HOM05D004930 ORTHO05D006531 6.1e-95 352.1 276 63.4
A08p08610 Brassica napus HOM05D004930 ORTHO05D006531 1.0e-94 351.3 333 57.7
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 1.0e-94 351.3 333 57.7
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 1.0e-94 351.3 289 61.9
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 1.8e-94 350.5 355 56.3
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 3.0e-94 349.7 268 63.8
BcaB04g17919 Brassica carinata HOM05D004930 ORTHO05D006531 5.1e-94 349.0 334 56.3
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 6.7e-94 348.6 328 57.0
SalBow6G0918 Salvia bowleyana HOM05D004930 ORTHO05D006531 1.1e-93 347.8 263 64.6
SalBow6G1869 Salvia bowleyana HOM05D004930 ORTHO05D006531 1.1e-93 347.8 263 64.6
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 1.1e-93 347.8 253 68.0
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 1.5e-93 347.4 267 66.3
Duzib052G0674 Durio zibethinus HOM05D004930 ORTHO05D006531 1.5e-93 347.4 336 58.0
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 1.5e-93 347.4 256 63.7
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 1.9e-93 347.1 251 67.7
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 2.5e-93 346.7 348 54.3
BcaC08g43878 Brassica carinata HOM05D004930 ORTHO05D006531 4.3e-93 345.9 283 62.2
BolC6t36417H Brassica oleracea HOM05D004930 ORTHO05D006531 4.3e-93 345.9 283 62.2
A09p32980 Brassica napus HOM05D004930 ORTHO05D006531 5.7e-93 345.5 283 62.2
BraA09t38838Z Brassica rapa HOM05D004930 ORTHO05D006531 5.7e-93 345.5 283 62.2
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 7.4e-93 345.1 277 61.7
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 9.7e-93 344.7 251 68.1
C06p12670 Brassica napus HOM05D004930 ORTHO05D006531 8.2e-92 341.7 283 60.8
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 1.1e-91 341.3 312 57.4
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 1.4e-91 340.9 353 54.4
Lalb_Chr20g0123411 Lupinus albus HOM05D004930 ORTHO05D006531 3.1e-91 339.7 254 66.5
BcaB07g32965 Brassica carinata HOM05D004930 ORTHO05D006531 6.9e-91 338.6 344 54.7
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 1.5e-90 337.4 295 59.7
Zm00001eb113740 Zea mays HOM05D004930 ORTHO05D006531 7.7e-90 335.1 254 63.8
Ah.03g147430 Amaranthus hybridus HOM05D004930 ORTHO05D006531 1.8e-86 323.9 294 57.8
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.0e-86 323.2 282 56.7
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 4.4e-85 319.3 334 52.4
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 5.7e-85 318.9 337 52.5
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 5.7e-85 318.9 334 52.4
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 7.4e-85 318.5 269 59.5
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 2.8e-84 316.6 302 57.6
Thhalv10007991m.g Eutrema salsugineum HOM05D004930 ORTHO05D006531 4.8e-84 315.8 248 64.1
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 1.8e-83 313.9 415 44.3
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 1.3e-81 307.8 386 45.6
Lj5A251T70 Lonicera japonica HOM05D004930 ORTHO05D006531 2.9e-81 306.6 270 58.5
BolC8t47898H Brassica oleracea HOM05D004930 ORTHO05D006531 1.1e-80 304.7 321 53.0
Sabra03G0012100 Salix brachista HOM05D004930 ORTHO05D006531 3.2e-80 303.1 398 44.5
Peaxi162Scf00011g00243 Petunia axillaris HOM05D004930 ORTHO05D006531 2.1e-79 300.4 272 57.0
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 8.8e-78 295.0 264 58.7
Sabra01G0161800 Salix brachista HOM05D004930 ORTHO05D006531 2.6e-77 293.5 452 42.0
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 4.8e-76 289.3 333 49.5
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 1.4e-75 287.7 309 52.1
SMO139G0053 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 1.4e-75 287.7 212 66.5
CBR_g22336 Chara braunii HOM05D004930 ORTHO05D006531 2.4e-75 287.0 287 56.4
Oeu012747.1 Olea europaea HOM05D004930 ORTHO05D006531 7.0e-75 285.4 205 68.8
Rhsim11G0130300 Rhododendron simsii HOM05D004930 ORTHO05D006531 9.1e-75 285.0 209 67.5
Ca_29925_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 5.9e-74 282.3 204 67.2
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 6.7e-70 268.9 278 52.9
AUR62003501 Chenopodium quinoa HOM05D004930 ORTHO05D006531 2.7e-63 246.9 197 65.0
HanXRQChr02g0058791 Helianthus annuus HOM05D004930 ORTHO05D006531 1.0e-62 245.0 176 65.9
Sed0026856 Sechium edule HOM05D004930 ORTHO05D006531 9.8e-61 238.4 172 68.6
Manes.07G014400 Manihot esculenta HOM05D004930 ORTHO05D006531 4.1e-59 233.0 233 55.8
Prupe.1G566300 Prunus persica HOM05D004930 ORTHO05D006531 7.0e-59 232.3 172 67.4
CSS0024235 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 2.9e-49 200.3 286 45.8
vmacro19901 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 3.0e-46 190.3 550 30.7
Haze_01635 Corylus avellana HOM05D004930 ORTHO05D006531 4.6e-42 176.4 136 64.7
Cre03.g195500 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 1.9e-40 171.0 263 37.6
Cre12.g530950 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 4.3e-40 169.9 242 40.9
MCO11G494 Micromonas commoda HOM05D004930 ORTHO05D006531 1.3e-33 148.3 287 35.5
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 6.6e-25 119.4 253 32.4
CARHR054090 Cardamine hirsuta HOM05D004930 ORTHO05D006531 2.4e-19 100.9 89 58.4
MCO01G237 Micromonas commoda HOM05D004930 ORTHO05D006531 1.0e-17 95.5 227 29.5
AUR62003500 Chenopodium quinoa HOM05D004930 ORTHO05D006531 4.3e-16 90.1 73 64.4
Migut.N01037 Erythranthe guttata HOM05D004930 ORTHO05D006531 1.2e-13 82.0 68 60.3
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.0e-13 81.3 63 61.9
Cre09.g400219 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 2.6e-13 80.9 167 34.7
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 2.6e-13 80.9 63 61.9
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 1.3e-12 78.6 63 61.9
FAN06G5097 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.8e-12 77.0 63 60.3
FAN25G1134 Fragaria x ananassa HOM05D004930 ORTHO05D006531 3.8e-12 77.0 63 60.3
PRCOL_00003693 Prasinoderma coloniale HOM05D004930 ORTHO05D006531 8.4e-12 75.9 167 33.5
FAN01G0209 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.4e-11 74.3 63 55.6
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.4e-11 74.3 63 55.6
FAN17G1951 Fragaria x ananassa HOM05D004930 ORTHO05D006531 2.4e-11 74.3 63 55.6
Cre10.g431350 Chlamydomonas reinhardtii HOM05D039848 ORTHO05D028745 3.2e-11 73.9 161 30.4
FAN17G1425 Fragaria x ananassa HOM05D004930 ORTHO05D006531 9.3e-11 72.4 63 54.0
CBR_g45217 Chara braunii HOM05D004930 ORTHO05D028745 1.6e-10 71.6 167 29.3
Ca_20167_v3 Cicer arietinum L. HOM05D004930 ORTHO05D000002 8.7e-09 65.9 48 68.8
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 1.5e-08 65.1 141 33.3
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 1.9e-08 64.7 140 32.9
Cre26.g756847 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D028745 6.2e-07 59.7 159 28.9


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