Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_18750 Physcomitrium patens HOM05D017892 ORTHO05D019599 7.7e-189 663.7 341 100.0
Pp3c11_18753 Physcomitrium patens HOM05D017892 ORTHO05D019599 7.7e-189 663.7 341 100.0
Pp3c7_7380 Physcomitrium patens HOM05D017892 ORTHO05D019599 2.6e-120 436.0 340 69.4
Mapoly0011s0029 Marchantia polymorpha HOM05D017892 ORTHO05D019599 7.5e-51 205.3 255 46.3
AagrBONN_evm.TU.Sc2ySwM_340.1453 Anthoceros agrestis HOM05D017892 ORTHO05D019599 9.5e-30 135.2 201 45.3
Cre16.g663700 Chlamydomonas reinhardtii HOM05D017892 ORTHO05D019599 3.4e-19 100.1 162 37.7
Cre03.g177450 Chlamydomonas reinhardtii HOM05D017892 ORTHO05D019599 3.0e-15 87.0 180 31.7
Cre16.g688302 Chlamydomonas reinhardtii HOM05D002183 ORTHO05D002169 2.7e-08 63.9 187 27.3
Pp3c1_28640 Physcomitrium patens HOM05D002183 ORTHO05D002169 7.8e-08 62.4 195 29.2
Mapoly0014s0050 Marchantia polymorpha HOM05D002183 ORTHO05D002169 1.3e-07 61.6 142 26.8
Ah.02g124970 Amaranthus hybridus HOM05D002183 ORTHO05D002169 6.6e-07 59.3 131 26.0
Medtr1g022485 Medicago truncatula HOM05D002183 ORTHO05D002169 8.6e-07 58.9 133 28.6
Pp3c8_20150 Physcomitrium patens HOM05D002183 ORTHO05D002169 1.1e-06 58.5 164 29.9
AagrBONN_evm.TU.Sc2ySwM_228.1027 Anthoceros agrestis HOM05D002183 ORTHO05D002169 1.5e-06 58.2 139 26.6
CDE11G0795 Ceratophyllum demersum HOM05D002183 ORTHO05D002169 2.5e-06 57.4 129 28.7
Os01g0702000 Oryza sativa ssp. japonica HOM05D002183 ORTHO05D002169 2.5e-06 57.4 121 28.9
Pp3c2_9900 Physcomitrium patens HOM05D002183 ORTHO05D002169 2.5e-06 57.4 139 28.1
Migut.C00759 Erythranthe guttata HOM05D002183 ORTHO05D002169 3.3e-06 57.0 121 26.4
Pp3c20_10270 Physcomitrium patens HOM05D002183 ORTHO05D002169 4.3e-06 56.6 159 28.3
Zm00001eb135130 Zea mays HOM05D002183 ORTHO05D002169 7.3e-06 55.8 121 28.9


User provided reference genes

Program Settings