Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_16910 Physcomitrium patens HOM05D004525 ORTHO05D005295 1.8e-87 325.9 163 100.0
Mapoly0151s0039 Marchantia polymorpha HOM05D004525 ORTHO05D005295 3.5e-46 188.7 158 62.0
HPP92_025871 Vanilla planifolia HOM05D004525 ORTHO05D005295 4.0e-42 175.3 162 49.4
SMO301G0053 Selaginella moellendorffii HOM05D004525 ORTHO05D005295 5.2e-42 174.9 146 61.6
Nn3g18812 Nelumbo nucifera HOM05D004525 ORTHO05D005295 7.5e-41 171.0 162 50.6
Sabra01G0060700 Salix brachista HOM05D004525 ORTHO05D005295 7.5e-41 171.0 146 54.8
EL10Ac5g12425 Beta vulgaris HOM05D004525 ORTHO05D005295 1.7e-40 169.9 148 54.7
TAR629G2664 Trochodendron aralioides HOM05D004525 ORTHO05D005295 2.2e-40 169.5 146 54.1
GSVIVG01019654001 Vitis vinifera HOM05D004525 ORTHO05D005295 2.2e-40 169.5 144 55.6
Gohir.A12G240200 Gossypium hirsutum HOM05D004525 ORTHO05D005295 2.8e-40 169.1 160 50.0
TWI56G0194 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 3.7e-40 168.7 144 54.9
Duzib205G1187 Durio zibethinus HOM05D004525 ORTHO05D005295 4.8e-40 168.3 160 50.0
Hund11348 Selenicereus undatus HOM05D004525 ORTHO05D005295 6.3e-40 167.9 149 53.7
MBI04_g25309_MAGBIO Magnolia biondii HOM05D004525 ORTHO05D005295 1.1e-39 167.2 150 52.0
Os09g0528300 Oryza sativa ssp. japonica HOM05D004525 ORTHO05D005295 1.1e-39 167.2 148 52.0
Potri.003G146900 Populus trichocarpa HOM05D004525 ORTHO05D005295 1.1e-39 167.2 146 53.4
Thecc.03G220900 Theobroma cacao HOM05D004525 ORTHO05D005295 1.1e-39 167.2 160 50.0
Gohir.D12G241500 Gossypium hirsutum HOM05D004525 ORTHO05D005295 1.4e-39 166.8 160 49.4
Gorai.008G258800 Gossypium raimondii HOM05D004525 ORTHO05D005295 1.4e-39 166.8 160 49.4
Sabra03G0106900 Salix brachista HOM05D004525 ORTHO05D005295 1.4e-39 166.8 145 53.1
Ciclev10022441m.g Citrus clementina HOM05D004525 ORTHO05D005295 1.8e-39 166.4 144 54.2
Potri.001G083801 Populus trichocarpa HOM05D004525 ORTHO05D005295 2.4e-39 166.0 144 52.8
Zm00001eb103320 Zea mays HOM05D004525 ORTHO05D005295 2.4e-39 166.0 160 48.8
Zm00001eb319380 Zea mays HOM05D004525 ORTHO05D005295 2.4e-39 166.0 160 48.8
Duzib068G1021 Durio zibethinus HOM05D004525 ORTHO05D005295 3.1e-39 165.6 144 54.2
PSO478G2085 Papaver somniferum HOM05D004525 ORTHO05D005295 4.1e-39 165.2 146 53.4
AagrBONN_evm.TU.Sc2ySwM_117.1849 Anthoceros agrestis HOM05D004525 ORTHO05D005295 5.3e-39 164.9 159 50.9
AagrBONN_evm.TU.Sc2ySwM_368.381 Anthoceros agrestis HOM05D004525 ORTHO05D005295 5.3e-39 164.9 154 51.3
Sc01g0010720 Simmondsia chinensis HOM05D004525 ORTHO05D005295 5.3e-39 164.9 148 53.4
SGA_v2.0_scaffold14G07039 Striga asiatica HOM05D004525 ORTHO05D005295 5.3e-39 164.9 144 52.1
SGA_v2.0_scaffold36G14274 Striga asiatica HOM05D004525 ORTHO05D005295 5.3e-39 164.9 144 52.1
Actinidia22207 Actinidia chinensis HOM05D004525 ORTHO05D005295 7.0e-39 164.5 144 53.5
AUR62007057 Chenopodium quinoa HOM05D004525 ORTHO05D005295 7.0e-39 164.5 148 52.0
COL.COLO4_10799 Corchorus olitorius HOM05D004525 ORTHO05D005295 7.0e-39 164.5 162 48.8
MD14G1136300 Malus domestica HOM05D004525 ORTHO05D005295 7.0e-39 164.5 144 52.8
QL12p036922 Quercus lobata HOM05D004525 ORTHO05D005295 9.1e-39 164.1 160 50.0
PSO017G1681 Papaver somniferum HOM05D004525 ORTHO05D005295 1.2e-38 163.7 146 52.7
SalBow6G4763 Salvia bowleyana HOM05D004525 ORTHO05D005295 1.2e-38 163.7 146 50.0
Cc08_g16770 Coffea canephora HOM05D004525 ORTHO05D005295 1.6e-38 163.3 144 53.5
CDE07G1557 Ceratophyllum demersum HOM05D004525 ORTHO05D005295 2.0e-38 162.9 146 50.7
ClCG10G000810 Citrullus lanatus HOM05D004525 ORTHO05D005295 2.0e-38 162.9 144 52.8
Dinv38179 Davidia involucrata HOM05D004525 ORTHO05D005295 2.0e-38 162.9 144 53.5
Manes.09G101000 Manihot esculenta HOM05D004525 ORTHO05D005295 2.0e-38 162.9 144 53.5
CsaV3_3G000870 Cucumis sativus L. HOM05D004525 ORTHO05D005295 2.7e-38 162.5 144 52.8
QL02p027997 Quercus lobata HOM05D004525 ORTHO05D005295 2.7e-38 162.5 160 48.8
TWI36G0523 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 2.7e-38 162.5 142 53.5
MD06G1119500 Malus domestica HOM05D004525 ORTHO05D005295 3.5e-38 162.2 144 52.1
Eucgr.C04229 Eucalyptus grandis HOM05D004525 ORTHO05D005295 4.5e-38 161.8 163 49.7
Sed0024458 Sechium edule HOM05D004525 ORTHO05D005295 4.5e-38 161.8 144 51.4
CARHR212640 Cardamine hirsuta HOM05D004525 ORTHO05D005295 5.9e-38 161.4 144 53.5
Cpa.g.sc27.182 Carica papaya HOM05D004525 ORTHO05D005295 5.9e-38 161.4 144 52.1
PGR031G2275 Punica granatum HOM05D004525 ORTHO05D005295 5.9e-38 161.4 144 52.1
DCAR_006547 Daucus carota HOM05D004525 ORTHO05D005295 7.7e-38 161.0 158 50.0
Atru.chr9.1879 Acer truncatum HOM05D004525 ORTHO05D005295 1.0e-37 160.6 144 51.4
ATR0620G086 Amborella trichopoda HOM05D004525 ORTHO05D005295 1.0e-37 160.6 150 50.0
MSTRG.24865 Avicennia marina HOM05D004525 ORTHO05D005295 1.0e-37 160.6 144 51.4
ECA246G3328 Erigeron canadensis HOM05D004525 ORTHO05D005295 1.0e-37 160.6 144 52.8
Nitab4.5_0012632g0010 Nicotiana tabacum HOM05D004525 ORTHO05D005295 1.0e-37 160.6 158 48.7
Prupe.5G130000 Prunus persica HOM05D004525 ORTHO05D005295 1.0e-37 160.6 144 51.4
THA.LOC104809303 Tarenaya hassleriana HOM05D004525 ORTHO05D005295 1.0e-37 160.6 142 52.1
unitig_744.g24303 Utricularia gibba HOM05D004525 ORTHO05D005295 1.0e-37 160.6 158 47.5
Aqoxy3G00526 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 1.3e-37 160.2 146 50.0
Aqoxy5G04330 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 1.3e-37 160.2 146 50.0
Lsat_1_v5_gn_3_14420 Lactuca sativa HOM05D004525 ORTHO05D005295 1.3e-37 160.2 160 50.0
CSS0029651 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 1.7e-37 159.8 144 53.5
DCAR_011870 Daucus carota HOM05D004525 ORTHO05D005295 1.7e-37 159.8 158 50.0
Prupe.2G307200 Prunus persica HOM05D004525 ORTHO05D005295 1.7e-37 159.8 148 50.0
FvH4_4g11450 Fragaria vesca HOM05D004525 ORTHO05D005295 2.2e-37 159.5 144 50.7
FAN07G0034 Fragaria x ananassa HOM05D004525 ORTHO05D005295 2.2e-37 159.5 144 50.7
Hma1.2p1_0456F.1_g156630 Hydrangea macrophylla HOM05D004525 ORTHO05D005295 2.2e-37 159.5 144 52.1
MSTRG.12201 Avicennia marina HOM05D004525 ORTHO05D005295 2.9e-37 159.1 160 46.9
BcaB03g14082 Brassica carinata HOM05D004525 ORTHO05D005295 2.9e-37 159.1 160 46.9
CSS0049671 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 2.9e-37 159.1 144 53.5
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 3.8e-37 158.7 160 46.9
Migut.E00628 Erythranthe guttata HOM05D004525 ORTHO05D005295 3.8e-37 158.7 160 46.9
Solyc08g065160.3 Solanum lycopersicum HOM05D004525 ORTHO05D005295 3.8e-37 158.7 158 47.5
Sopen08g018760 Solanum pennellii HOM05D004525 ORTHO05D005295 3.8e-37 158.7 158 47.5
PGSC0003DMG400029951 Solanum tuberosum HOM05D004525 ORTHO05D005295 3.8e-37 158.7 158 47.5
Ah.12g053230 Amaranthus hybridus HOM05D004525 ORTHO05D005295 5.0e-37 158.3 148 50.0
CSS0036474 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 5.0e-37 158.3 144 53.5
Haze_04010 Corylus avellana HOM05D004525 ORTHO05D005295 5.0e-37 158.3 140 52.1
AL1G39060 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 6.5e-37 157.9 144 51.4
BcaC06g35131 Brassica carinata HOM05D004525 ORTHO05D005295 6.5e-37 157.9 160 46.9
FAN22G0758 Fragaria x ananassa HOM05D004525 ORTHO05D005295 6.5e-37 157.9 147 51.0
Nitab4.5_0001367g0040 Nicotiana tabacum HOM05D004525 ORTHO05D005295 6.5e-37 157.9 158 47.5
Sp1g22150 Schrenkiella parvula HOM05D004525 ORTHO05D005295 6.5e-37 157.9 146 50.0
Cfa006748 Carpinus fangiana HOM05D004525 ORTHO05D005295 8.5e-37 157.5 140 52.1
AT1G26665 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 1.1e-36 157.1 144 52.1
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 1.1e-36 157.1 160 46.9
HanXRQChr17g0534221 Helianthus annuus HOM05D004525 ORTHO05D005295 1.5e-36 156.8 160 48.8
Aa31LG9G260 Aethionema arabicum HOM05D004525 ORTHO05D005295 1.9e-36 156.4 144 50.7
CiPaw.11G112000 Carya illinoinensis HOM05D004525 ORTHO05D005295 1.9e-36 156.4 144 51.4
Cfa011920 Carpinus fangiana HOM05D004525 ORTHO05D005295 3.2e-36 155.6 141 51.8
Psat7g073160 Pisum sativum HOM05D004525 ORTHO05D005295 3.2e-36 155.6 146 47.3
Thhalv10008848m.g Eutrema salsugineum HOM05D004525 ORTHO05D005295 4.2e-36 155.2 144 51.4
RcHm_v2.0_Chr1g0332661 Rosa chinensis HOM05D004525 ORTHO05D005295 4.2e-36 155.2 144 50.0
RcHm_v2.0_Chr6g0273561 Rosa chinensis HOM05D004525 ORTHO05D005295 5.5e-36 154.8 144 50.0
AT5G41910 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 9.4e-36 154.1 145 53.8
Rhsim07G0078000 Rhododendron simsii HOM05D004525 ORTHO05D005295 1.2e-35 153.7 146 49.3
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 1.6e-35 153.3 160 45.6
CiPaw.12G077100 Carya illinoinensis HOM05D004525 ORTHO05D005295 1.6e-35 153.3 142 50.0
Carub.0001s2436 Capsella rubella HOM05D004525 ORTHO05D005295 2.1e-35 152.9 144 50.0
Lj8A200T57 Lonicera japonica HOM05D004525 ORTHO05D005295 2.1e-35 152.9 149 49.0
Lalb_Chr12g0205381 Lupinus albus HOM05D004525 ORTHO05D005295 2.1e-35 152.9 146 49.3
AL7G47302 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 4.7e-35 151.8 145 52.4
CANSAT56G2042 Cannabis sativa HOM05D004525 ORTHO05D005295 4.7e-35 151.8 154 47.4
Glyma.08G296500 Glycine max HOM05D004525 ORTHO05D005295 4.7e-35 151.8 146 47.3
Ca_02991_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 6.1e-35 151.4 146 47.3
Glyma.18G125700 Glycine max HOM05D004525 ORTHO05D005295 8.0e-35 151.0 146 47.9
Medtr8g085570 Medicago truncatula HOM05D004525 ORTHO05D005295 1.0e-34 150.6 146 47.3
CARHR025300 Cardamine hirsuta HOM05D004525 ORTHO05D005295 1.4e-34 150.2 145 50.3
Lalb_Chr13g0294931 Lupinus albus HOM05D004525 ORTHO05D005295 1.4e-34 150.2 146 47.9
Ca_17957_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 1.8e-34 149.8 146 46.6
Phvul.003G069600 Phaseolus vulgaris HOM05D004525 ORTHO05D005295 1.5e-33 146.7 146 46.6
Atru.chr3.1913 Acer truncatum HOM05D004525 ORTHO05D005295 2.0e-33 146.4 127 55.1
BraA09t39504Z Brassica rapa HOM05D004525 ORTHO05D005295 2.6e-33 146.0 162 45.1
unitig_21.g20890 Utricularia gibba HOM05D004525 ORTHO05D005295 5.7e-33 144.8 147 48.3
vmacro11499 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 5.7e-33 144.8 157 45.9
VMungo0251G0643 Vigna mungo HOM05D004525 ORTHO05D005295 1.3e-32 143.7 144 45.8
C05p24330 Brassica napus HOM05D004525 ORTHO05D005295 2.2e-32 142.9 157 49.0
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 3.7e-32 142.1 137 48.9
Lj4g0018067 Lotus japonicus HOM05D004525 ORTHO05D005295 8.3e-32 141.0 146 43.2
Haze_09177 Corylus avellana HOM05D004525 ORTHO05D005295 1.1e-31 140.6 121 53.7
TPR.G15828 Trifolium pratense HOM05D004525 ORTHO05D005295 3.5e-30 135.6 146 45.2
vmacro13851 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 4.5e-30 135.2 144 45.1
Psat7g072880 Pisum sativum HOM05D004525 ORTHO05D005295 7.7e-30 134.4 146 43.8
Psat7g073280 Pisum sativum HOM05D004525 ORTHO05D005295 2.3e-29 132.9 121 49.6
FAN08G2166 Fragaria x ananassa HOM05D000319 ORTHO05D035382 8.6e-29 131.0 117 52.1
AUR62019920 Chenopodium quinoa HOM05D004525 ORTHO05D005295 1.1e-28 130.6 108 53.7
Lj4g0019040 Lotus japonicus HOM05D004525 ORTHO05D005295 2.5e-28 129.4 117 50.4
Psat7g074000 Pisum sativum HOM05D004525 ORTHO05D005295 3.3e-28 129.0 121 46.3
TPR.G11962 Trifolium pratense HOM05D004525 ORTHO05D005295 6.1e-27 124.8 146 41.8
TAR375G0036 Trochodendron aralioides HOM05D004525 ORTHO05D005295 1.4e-26 123.6 106 51.9
Peaxi162Scf00640g00032 Petunia axillaris HOM05D004525 ORTHO05D005295 1.8e-26 123.2 126 48.4
Oeu022035.1 Olea europaea HOM05D004525 ORTHO05D005295 2.3e-26 122.9 164 40.2
SEGI_32557 Sequoiadendron giganteum HOM05D004525 ORTHO05D005295 4.0e-26 122.1 107 53.3
Peaxi162Scf01444g00013 Petunia axillaris HOM05D004525 ORTHO05D005295 6.8e-26 121.3 158 39.9
FvH4_5g19692 Fragaria vesca HOM05D004525 ORTHO05D005295 3.4e-25 119.0 109 52.3
arahy.Tifrunner.gnm1.ann1.0LH6ZS Arachis hypogaea HOM05D004525 ORTHO05D005295 4.4e-25 118.6 146 42.5
arahy.Tifrunner.gnm1.ann1.DJD4V2 Arachis hypogaea HOM05D004525 ORTHO05D005295 9.8e-25 117.5 169 38.5
FAN17G2704 Fragaria x ananassa HOM05D004525 ORTHO05D005295 3.7e-24 115.5 147 42.9
PGSC0003DMG400008601 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.4e-23 113.6 129 47.3
Nitab4.5_0017193g0030 Nicotiana tabacum HOM05D004525 ORTHO05D005295 2.4e-23 112.8 126 45.2
PGSC0003DMG400043501 Solanum tuberosum HOM05D004525 ORTHO05D005295 5.4e-23 111.7 129 46.5
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 7.0e-23 111.3 86 55.8
PGSC0003DMG400017120 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.2e-22 110.5 129 48.1
CAN.G6.3 Capsicum annuum HOM05D004525 ORTHO05D005295 5.9e-22 108.2 81 58.0
PGSC0003DMG400040735 Solanum tuberosum HOM05D004525 ORTHO05D005295 5.0e-21 105.1 129 43.4
Cfa007058 Carpinus fangiana HOM05D004525 ORTHO05D005295 5.6e-20 101.7 94 51.1
MELO3C013773.2 Cucumis melo HOM05D004525 ORTHO05D005295 2.1e-19 99.8 121 43.0
PGSC0003DMG400039131 Solanum tuberosum HOM05D004525 ORTHO05D005295 2.1e-19 99.8 129 38.0
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 1.2e-17 94.0 95 43.2
Actinidia27285 Actinidia chinensis HOM05D004525 ORTHO05D005295 2.9e-16 89.4 160 33.1
Nitab4.5_0002724g0080 Nicotiana tabacum HOM05D004525 ORTHO05D005295 5.6e-12 75.1 74 47.3
RcHm_v2.0_Chr5g0055281 Rosa chinensis HOM05D004525 ORTHO05D005295 4.9e-08 62.0 58 48.3
CAN.G1631.10 Capsicum annuum HOM05D004525 ORTHO05D005295 9.2e-07 57.8 83 36.1


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