Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 2.9e-35 151.4 76 100.0
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 4.9e-27 124.0 62 100.0
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 2.6e-20 101.7 62 77.4
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 5.8e-20 100.5 62 74.2
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 5.8e-20 100.5 70 68.6
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 7.5e-20 100.1 70 65.7
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 7.5e-20 100.1 75 66.7
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 9.9e-20 99.8 70 68.6
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 1.3e-19 99.4 70 67.1
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 1.3e-19 99.4 70 64.3
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 1.3e-19 99.4 72 65.3
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 1.7e-19 99.0 70 65.7
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 1.7e-19 99.0 62 72.6
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 2.2e-19 98.6 70 64.3
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 2.2e-19 98.6 70 65.7
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 2.2e-19 98.6 70 65.7
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 2.2e-19 98.6 70 65.7
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 2.2e-19 98.6 70 65.7
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 2.2e-19 98.6 70 67.1
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.2e-19 98.6 70 67.1
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.2e-19 98.6 70 67.1
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 2.2e-19 98.6 70 68.6
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 2.2e-19 98.6 62 72.6
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 2.2e-19 98.6 70 65.7
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 2.9e-19 98.2 62 74.2
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 2.9e-19 98.2 62 74.2
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 2.9e-19 98.2 62 74.2
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.9e-19 98.2 62 74.2
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.9e-19 98.2 62 74.2
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 2.9e-19 98.2 62 72.6
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 2.9e-19 98.2 62 72.6
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 2.9e-19 98.2 62 72.6
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 3.7e-19 97.8 62 71.0
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 3.7e-19 97.8 62 71.0
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 3.7e-19 97.8 62 71.0
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 3.7e-19 97.8 62 71.0
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 3.7e-19 97.8 70 68.6
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 3.7e-19 97.8 70 67.1
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 3.7e-19 97.8 70 68.6
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 3.7e-19 97.8 70 65.7
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 3.7e-19 97.8 62 72.6
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 4.9e-19 97.4 62 69.4
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 4.9e-19 97.4 62 69.4
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 4.9e-19 97.4 62 72.6
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 4.9e-19 97.4 62 69.4
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 6.4e-19 97.1 62 69.4
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 6.4e-19 97.1 62 72.6
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 6.4e-19 97.1 62 71.0
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 6.4e-19 97.1 62 71.0
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 6.4e-19 97.1 70 65.7
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 6.4e-19 97.1 62 72.6
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 6.4e-19 97.1 70 65.7
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 8.3e-19 96.7 62 72.6
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 8.3e-19 96.7 68 70.6
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 1.1e-18 96.3 62 72.6
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 1.4e-18 95.9 70 64.3
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 1.4e-18 95.9 62 71.0
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.4e-18 95.9 62 71.0
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 1.9e-18 95.5 62 72.6
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 1.9e-18 95.5 75 64.0
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.9e-18 95.5 70 65.7
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.9e-18 95.5 70 65.7
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 1.9e-18 95.5 70 64.3
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 2.4e-18 95.1 62 71.0
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 3.2e-18 94.7 70 64.3
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 3.2e-18 94.7 62 72.6
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 4.1e-18 94.4 70 65.7
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 4.1e-18 94.4 70 65.7
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 4.1e-18 94.4 70 61.4
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 4.1e-18 94.4 70 61.4
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 4.1e-18 94.4 70 64.3
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 5.4e-18 94.0 75 61.3
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 5.4e-18 94.0 75 61.3
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 5.4e-18 94.0 69 63.8
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 5.4e-18 94.0 62 71.0
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 7.1e-18 93.6 62 71.0
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 7.1e-18 93.6 70 62.9
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 7.1e-18 93.6 70 64.3
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 9.2e-18 93.2 64 67.2
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 1.2e-17 92.8 61 68.9
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 1.2e-17 92.8 62 69.4
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 1.2e-17 92.8 70 65.7
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 1.2e-17 92.8 70 62.9
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.6e-17 92.4 62 69.4
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 1.6e-17 92.4 62 69.4
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 2.1e-17 92.0 62 69.4
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 3.5e-17 91.3 76 59.2
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 3.5e-17 91.3 58 72.4
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 7.8e-17 90.1 62 67.7
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 7.8e-17 90.1 62 69.4
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 1.0e-16 89.7 62 66.1
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 1.0e-16 89.7 62 66.1
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 3.9e-16 87.8 62 64.5
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 3.8e-11 71.2 49 61.2
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 3.8e-11 71.2 46 67.4
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 6.4e-11 70.5 55 58.2
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 2.4e-10 68.6 62 58.1
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 5.4e-10 67.4 49 61.2
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 4.7e-06 54.3 34 64.7


User provided reference genes

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