Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_15090 Physcomitrium patens HOM05D005667 ORTHO05D007299 1.2e-194 682.9 331 100.0
Pp3c11_14960 Physcomitrium patens HOM05D005667 ORTHO05D007299 2.9e-161 572.0 296 93.2
Pp3c2_26100 Physcomitrium patens HOM05D005667 ORTHO05D007299 4.0e-118 428.7 297 69.0
SEGI_23788 Sequoiadendron giganteum HOM05D005667 ORTHO05D007299 1.2e-82 310.8 304 51.3
SMO329G0065 Selaginella moellendorffii HOM05D005667 ORTHO05D007299 1.8e-78 297.0 332 48.2
Mapoly0153s0027 Marchantia polymorpha HOM05D005667 ORTHO05D007299 1.3e-76 290.8 301 49.8
MD11G1306000 Malus domestica HOM05D005667 ORTHO05D007299 2.9e-76 289.7 299 49.8
Phvul.001G206300 Phaseolus vulgaris HOM05D005667 ORTHO05D007299 8.5e-76 288.1 298 47.3
Cfa005935 Carpinus fangiana HOM05D005667 ORTHO05D007299 2.5e-75 286.6 298 48.7
Atru.chr5.1169 Acer truncatum HOM05D005667 ORTHO05D007299 4.2e-75 285.8 297 47.5
Sed0014922 Sechium edule HOM05D005667 ORTHO05D007299 1.2e-74 284.3 298 48.3
TPR.G9636 Trifolium pratense HOM05D005667 ORTHO05D007299 1.6e-74 283.9 301 45.5
VMungo1383G3519 Vigna mungo HOM05D005667 ORTHO05D007299 1.6e-74 283.9 298 46.3
CsaV3_4G000700 Cucumis sativus L. HOM05D005667 ORTHO05D007299 3.6e-74 282.7 298 48.7
MD03G1286100 Malus domestica HOM05D005667 ORTHO05D007299 3.6e-74 282.7 299 48.2
Medtr7g108870 Medicago truncatula HOM05D005667 ORTHO05D007299 3.6e-74 282.7 298 46.6
Medtr8g058590 Medicago truncatula HOM05D005667 ORTHO05D007299 3.6e-74 282.7 298 46.6
MELO3C017966.2 Cucumis melo HOM05D005667 ORTHO05D007299 4.7e-74 282.3 298 48.3
QL12p027280 Quercus lobata HOM05D005667 ORTHO05D007299 6.1e-74 282.0 298 46.6
Hund18138 Selenicereus undatus HOM05D005667 ORTHO05D007299 6.1e-74 282.0 298 47.7
Ca_09151_v3 Cicer arietinum L. HOM05D005667 ORTHO05D007299 1.8e-73 280.4 304 45.7
Solyc09g075000.3 Solanum lycopersicum HOM05D005667 ORTHO05D007299 1.8e-73 280.4 299 48.2
ATR0796G332 Amborella trichopoda HOM05D005667 ORTHO05D007299 2.3e-73 280.0 299 47.8
TAR627G0762 Trochodendron aralioides HOM05D005667 ORTHO05D007299 2.3e-73 280.0 298 47.3
Nn4g25820 Nelumbo nucifera HOM05D005667 ORTHO05D007299 4.0e-73 279.3 297 46.5
Sopen09g029820 Solanum pennellii HOM05D005667 ORTHO05D007299 5.2e-73 278.9 299 47.8
TAR365G0445 Trochodendron aralioides HOM05D005667 ORTHO05D007299 5.2e-73 278.9 299 47.2
Dinv33042 Davidia involucrata HOM05D005667 ORTHO05D007299 8.8e-73 278.1 298 47.7
Psat3g021960 Pisum sativum HOM05D005667 ORTHO05D007299 1.1e-72 277.7 305 45.9
Prupe.8G259400 Prunus persica HOM05D005667 ORTHO05D007299 1.5e-72 277.3 296 48.0
PGSC0003DMG400011397 Solanum tuberosum HOM05D005667 ORTHO05D007299 2.6e-72 276.6 299 47.8
Glyma.19G210500 Glycine max HOM05D005667 ORTHO05D007299 3.3e-72 276.2 301 46.5
AT2G47790 Arabidopsis thaliana HOM05D005667 ORTHO05D007299 4.4e-72 275.8 298 48.0
arahy.Tifrunner.gnm1.ann1.P0XQ2X Arachis hypogaea HOM05D005667 ORTHO05D007299 4.4e-72 275.8 302 45.7
Glyma.03G213700 Glycine max HOM05D005667 ORTHO05D007299 5.7e-72 275.4 301 46.2
Ciclev10020175m.g Citrus clementina HOM05D005667 ORTHO05D007299 9.7e-72 274.6 297 47.1
Nitab4.5_0002469g0040 Nicotiana tabacum HOM05D005667 ORTHO05D007299 9.7e-72 274.6 299 46.5
vmacro14998 Vaccinium macrocarpon HOM05D005667 ORTHO05D007299 1.3e-71 274.2 303 46.5
arahy.Tifrunner.gnm1.ann1.AQSE8X Arachis hypogaea HOM05D005667 ORTHO05D007299 3.7e-71 272.7 302 45.0
HanXRQChr04g0118041 Helianthus annuus HOM05D005667 ORTHO05D007299 4.8e-71 272.3 298 47.0
CANSAT25G0856 Cannabis sativa HOM05D005667 ORTHO05D007299 8.2e-71 271.6 298 45.3
FvH4_2g25530 Fragaria vesca HOM05D005667 ORTHO05D007299 1.1e-70 271.2 298 45.0
Peaxi162Scf00001g00492 Petunia axillaris HOM05D005667 ORTHO05D007299 2.4e-70 270.0 298 46.3
Actinidia32226 Actinidia chinensis HOM05D005667 ORTHO05D007299 3.1e-70 269.6 298 46.0
Sp4g29720 Schrenkiella parvula HOM05D005667 ORTHO05D007299 3.1e-70 269.6 298 47.3
Sc05g0004030 Simmondsia chinensis HOM05D005667 ORTHO05D007299 4.1e-70 269.2 298 48.0
Lj1g0013419 Lotus japonicus HOM05D005667 ORTHO05D007299 5.3e-70 268.9 305 43.9
DCAR_005798 Daucus carota HOM05D005667 ORTHO05D007299 7.0e-70 268.5 299 46.5
PSO210G4429 Papaver somniferum HOM05D005667 ORTHO05D007299 7.0e-70 268.5 297 44.1
Ah.08g213150 Amaranthus hybridus HOM05D005667 ORTHO05D007299 9.1e-70 268.1 303 47.2
Haze_04910 Corylus avellana HOM05D005667 ORTHO05D007299 1.2e-69 267.7 329 44.1
Sc05g0001380 Simmondsia chinensis HOM05D005667 ORTHO05D007299 2.0e-69 266.9 298 48.0
CDE08G0318 Ceratophyllum demersum HOM05D005667 ORTHO05D007299 2.7e-69 266.5 298 47.0
AL4G47370 Arabidopsis lyrata HOM05D005667 ORTHO05D007299 4.5e-69 265.8 298 46.3
QL12p026655 Quercus lobata HOM05D005667 ORTHO05D007299 7.7e-69 265.0 298 44.6
Lalb_Chr18g0047071 Lupinus albus HOM05D005667 ORTHO05D007299 1.0e-68 264.6 302 43.7
CiPaw.07G107100 Carya illinoinensis HOM05D005667 ORTHO05D007299 1.3e-68 264.2 298 46.3
FAN20G0834 Fragaria x ananassa HOM05D005667 ORTHO05D007299 1.7e-68 263.8 298 44.6
TWI23G0451 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 2.9e-68 263.1 298 45.0
PSO170G6061 Papaver somniferum HOM05D005667 ORTHO05D007299 1.1e-67 261.2 297 43.4
Lalb_Chr04g0259821 Lupinus albus HOM05D005667 ORTHO05D007299 1.9e-67 260.4 300 44.3
THA.LOC104817511 Tarenaya hassleriana HOM05D005667 ORTHO05D007299 2.5e-67 260.0 298 45.6
Carub.0004s3050 Capsella rubella HOM05D005667 ORTHO05D007299 5.5e-67 258.8 298 45.6
Cc01_g20730 Coffea canephora HOM05D005667 ORTHO05D007299 5.5e-67 258.8 278 47.5
Lsat_1_v5_gn_8_53441 Lactuca sativa HOM05D005667 ORTHO05D007299 7.2e-67 258.5 302 44.0
Actinidia24829 Actinidia chinensis HOM05D005667 ORTHO05D007299 2.7e-66 256.5 270 47.0
Sabra02G0153700 Salix brachista HOM05D005667 ORTHO05D007299 3.6e-66 256.1 303 43.9
Hma1.2p1_0209F.1_g088490 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 4.7e-66 255.8 299 43.8
Nitab4.5_0005515g0060 Nicotiana tabacum HOM05D005667 ORTHO05D007299 1.4e-65 254.2 299 45.2
CARHR143160 Cardamine hirsuta HOM05D005667 ORTHO05D007299 1.8e-65 253.8 298 45.6
Aa31LG1G29130 Aethionema arabicum HOM05D005667 ORTHO05D007299 2.3e-65 253.4 298 45.0
HPP92_027132 Vanilla planifolia HOM05D005667 ORTHO05D007299 3.0e-65 253.1 299 44.5
TWI59G1070 Tripterygium wilfordii HOM05D005667 ORTHO05D007299 6.8e-65 251.9 302 44.0
C04p72980 Brassica napus HOM05D005667 ORTHO05D007299 1.2e-64 251.1 326 44.8
BolC4t28779H Brassica oleracea HOM05D005667 ORTHO05D007299 1.2e-64 251.1 326 44.5
SalBow3G0511 Salvia bowleyana HOM05D005667 ORTHO05D007299 2.0e-64 250.4 297 44.4
Thhalv10001494m.g Eutrema salsugineum HOM05D005667 ORTHO05D007299 2.6e-64 250.0 297 44.4
BcaB06g29498 Brassica carinata HOM05D005667 ORTHO05D007299 5.7e-64 248.8 323 43.7
Eucgr.K03468 Eucalyptus grandis HOM05D005667 ORTHO05D007299 5.7e-64 248.8 299 43.8
Thecc.01G298400 Theobroma cacao HOM05D005667 ORTHO05D007299 5.7e-64 248.8 298 43.6
MSTRG.21625 Avicennia marina HOM05D005667 ORTHO05D007299 7.5e-64 248.4 298 44.6
COL.COLO4_23365 Corchorus olitorius HOM05D005667 ORTHO05D007299 1.7e-63 247.3 299 45.5
SGA_v2.0_scaffold2G01401 Striga asiatica HOM05D005667 ORTHO05D007299 1.7e-63 247.3 298 44.3
A04p35070 Brassica napus HOM05D005667 ORTHO05D007299 8.3e-63 245.0 326 44.2
unitig_0.g1174 Utricularia gibba HOM05D005667 ORTHO05D007299 1.1e-62 244.6 300 44.3
EL10Ac7g17451 Beta vulgaris HOM05D005667 ORTHO05D007299 1.4e-62 244.2 296 44.9
Migut.D00204 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.8e-62 243.8 300 44.3
Aqoxy2G02973 Aquilegia oxysepala HOM05D005667 ORTHO05D007299 3.1e-62 243.0 302 43.4
Duzib138G1280 Durio zibethinus HOM05D005667 ORTHO05D007299 3.1e-62 243.0 298 43.0
BraA04t18943Z Brassica rapa HOM05D005667 ORTHO05D007299 7.0e-62 241.9 327 44.0
ECA236G1571 Erigeron canadensis HOM05D005667 ORTHO05D007299 1.2e-61 241.1 297 42.8
Potri.002G205600 Populus trichocarpa HOM05D005667 ORTHO05D007299 1.6e-61 240.7 331 40.5
BcaC02g06992 Brassica carinata HOM05D005667 ORTHO05D007299 2.0e-61 240.4 324 43.2
Potri.014G130600 Populus trichocarpa HOM05D005667 ORTHO05D007299 4.5e-61 239.2 298 42.6
AUR62008656 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.0e-60 238.0 297 43.8
AUR62033112 Chenopodium quinoa HOM05D005667 ORTHO05D007299 1.0e-60 238.0 297 43.8
SHI15190 Sapria himalayana HOM05D005667 ORTHO05D007299 1.3e-60 237.7 307 43.3
GSVIVG01027987001 Vitis vinifera HOM05D005667 ORTHO05D007299 1.3e-60 237.7 253 47.0
Manes.01G217700 Manihot esculenta HOM05D005667 ORTHO05D007299 3.8e-60 236.1 327 40.4
PGR044G1684 Punica granatum HOM05D005667 ORTHO05D007299 1.9e-59 233.8 299 41.1
Lj1C26T7 Lonicera japonica HOM05D005667 ORTHO05D007299 3.2e-59 233.0 241 48.5
ClCG10G010830 Citrullus lanatus HOM05D005667 ORTHO05D007299 2.1e-58 230.3 298 44.3
CSS0019258 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 1.2e-56 224.6 324 40.1
BcaB06g29495 Brassica carinata HOM05D005667 ORTHO05D007299 9.8e-56 221.5 276 45.7
Gohir.A12G131200 Gossypium hirsutum HOM05D005667 ORTHO05D007299 3.1e-54 216.5 300 41.0
Gohir.D12G135100 Gossypium hirsutum HOM05D005667 ORTHO05D007299 4.1e-54 216.1 300 40.7
Hma1.2p1_0209F.1_g088500 Hydrangea macrophylla HOM05D005667 ORTHO05D007299 5.4e-54 215.7 386 34.2
Sabra14G0097200 Salix brachista HOM05D005667 ORTHO05D007299 9.2e-54 214.9 298 38.6
Gorai.008G146100 Gossypium raimondii HOM05D005667 ORTHO05D007299 3.5e-53 213.0 300 41.0
Rhsim01G0284200 Rhododendron simsii HOM05D005667 ORTHO05D007299 3.4e-48 196.4 281 39.1
AagrBONN_evm.TU.Sc2ySwM_344.2785 Anthoceros agrestis HOM05D005667 ORTHO05D007299 5.7e-48 195.7 170 50.6
CSS0024566 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 7.8e-45 185.3 299 38.5
RcHm_v2.0_Chr6g0293741 Rosa chinensis HOM05D005667 ORTHO05D007299 5.0e-44 182.6 207 43.0
CSS0050073 Camellia sinensis var. sinensis HOM05D005667 ORTHO05D007299 8.6e-44 181.8 299 38.1
Medtr8g058557 Medicago truncatula HOM05D005667 ORTHO05D007299 2.6e-40 170.2 149 51.7
Cpa.g.sc9.222 Carica papaya HOM05D005667 ORTHO05D007299 3.4e-40 169.9 184 44.0
Dinv19706 Davidia involucrata HOM05D005667 ORTHO05D007299 9.8e-40 168.3 169 48.5
Zm00001eb157470 Zea mays HOM05D005667 ORTHO05D007299 9.2e-38 161.8 139 54.7
HPP92_021590 Vanilla planifolia HOM05D005667 ORTHO05D007299 1.7e-36 157.5 143 51.7
Cre03.g178050 Chlamydomonas reinhardtii HOM05D005667 ORTHO05D007299 2.8e-34 150.2 285 35.4
MCO09G319 Micromonas commoda HOM05D005667 ORTHO05D007299 2.9e-31 140.2 322 29.8
Actinidia21054 Actinidia chinensis HOM05D005667 ORTHO05D007299 1.4e-22 111.3 161 38.5
CBR_g31107 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-14 85.1 149 36.2
CBR_g31109 Chara braunii HOM05D000019 ORTHO05D000048 4.6e-13 79.7 75 48.0
Migut.G00109 Erythranthe guttata HOM05D005667 ORTHO05D007299 1.0e-12 78.6 65 58.5
Os12g0294100 Oryza sativa ssp. japonica HOM05D005667 ORTHO05D007299 1.3e-12 78.2 109 38.5
CBR_g34279 Chara braunii HOM05D005667 ORTHO05D007299 1.5e-11 74.7 74 50.0
Oeu011452.2 Olea europaea HOM05D005667 ORTHO05D007299 4.3e-11 73.2 73 47.9
Nn3g21456 Nelumbo nucifera HOM05D005667 ORTHO05D007299 5.6e-11 72.8 173 30.6
Migut.D00125 Erythranthe guttata HOM05D005667 ORTHO05D007299 3.4e-08 63.5 73 45.2


User provided reference genes

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