Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c11_10320 Physcomitrium patens HOM05D006747 ORTHO05D008384 1.7e-205 719.2 368 100.0
CDE06G1525 Ceratophyllum demersum HOM05D006747 ORTHO05D008384 5.2e-74 282.3 273 54.9
Dinv22393 Davidia involucrata HOM05D006747 ORTHO05D008384 1.5e-73 280.8 259 54.8
GSVIVG01028355001 Vitis vinifera HOM05D006747 ORTHO05D008384 9.8e-73 278.1 255 54.1
Mapoly0024s0028 Marchantia polymorpha HOM05D006747 ORTHO05D008384 2.2e-72 276.9 341 46.9
Cc01_g18210 Coffea canephora HOM05D006747 ORTHO05D008384 6.3e-72 275.4 240 55.4
MBI07_g16913_MAGBIO Magnolia biondii HOM05D006747 ORTHO05D008384 1.1e-71 274.6 268 52.2
ATR0736G001 Amborella trichopoda HOM05D006747 ORTHO05D008384 1.8e-71 273.9 252 55.2
PSO063G2179 Papaver somniferum HOM05D006747 ORTHO05D008384 4.1e-71 272.7 268 51.9
AagrBONN_evm.TU.Sc2ySwM_228.388 Anthoceros agrestis HOM05D006747 ORTHO05D008384 1.6e-70 270.8 312 48.4
Atru.chr5.1716 Acer truncatum HOM05D006747 ORTHO05D008384 3.5e-70 269.6 261 50.2
BraA07t27816Z Brassica rapa HOM05D006747 ORTHO05D008384 4.5e-70 269.2 232 55.6
Peaxi162Scf00987g00036 Petunia axillaris HOM05D006747 ORTHO05D008384 4.5e-70 269.2 265 52.5
TPR.G35130 Trifolium pratense HOM05D006747 ORTHO05D008384 4.5e-70 269.2 250 54.0
arahy.Tifrunner.gnm1.ann1.EQ4JVG Arachis hypogaea HOM05D006747 ORTHO05D008384 1.0e-69 268.1 254 53.5
BcaC06g36739 Brassica carinata HOM05D006747 ORTHO05D008384 2.3e-69 266.9 232 54.3
Thecc.01G256100 Theobroma cacao HOM05D006747 ORTHO05D008384 2.3e-69 266.9 278 48.6
Lj5g0027576 Lotus japonicus HOM05D006747 ORTHO05D008384 2.9e-69 266.5 260 52.7
TAR362G0605 Trochodendron aralioides HOM05D006747 ORTHO05D008384 6.6e-69 265.4 266 49.6
Migut.D00438 Erythranthe guttata HOM05D006747 ORTHO05D008384 8.6e-69 265.0 232 55.2
Gorai.007G147500 Gossypium raimondii HOM05D006747 ORTHO05D008384 1.1e-68 264.6 269 49.1
Thhalv10002060m.g Eutrema salsugineum HOM05D006747 ORTHO05D008384 1.5e-68 264.2 266 50.0
Phvul.007G192000 Phaseolus vulgaris HOM05D006747 ORTHO05D008384 1.5e-68 264.2 260 52.3
Solyc06g008350.3 Solanum lycopersicum HOM05D006747 ORTHO05D008384 1.5e-68 264.2 240 54.6
Sopen06g003200 Solanum pennellii HOM05D006747 ORTHO05D008384 1.5e-68 264.2 240 54.6
arahy.Tifrunner.gnm1.ann1.0525TE Arachis hypogaea HOM05D006747 ORTHO05D008384 1.9e-68 263.8 254 52.4
Ciclev10021655m.g Citrus clementina HOM05D006747 ORTHO05D008384 1.9e-68 263.8 240 52.9
Psat6g054040 Pisum sativum HOM05D006747 ORTHO05D008384 2.5e-68 263.5 262 51.9
Potri.005G225900 Populus trichocarpa HOM05D006747 ORTHO05D008384 2.5e-68 263.5 232 53.4
Sabra05G0174300 Salix brachista HOM05D006747 ORTHO05D008384 2.5e-68 263.5 232 53.0
C07p00520 Brassica napus HOM05D006747 ORTHO05D008384 3.3e-68 263.1 232 53.9
Gohir.A11G131500 Gossypium hirsutum HOM05D006747 ORTHO05D008384 3.3e-68 263.1 269 49.1
Gohir.D11G137550 Gossypium hirsutum HOM05D006747 ORTHO05D008384 4.3e-68 262.7 269 48.7
Sp3g33710 Schrenkiella parvula HOM05D006747 ORTHO05D008384 4.3e-68 262.7 232 53.4
BolC7t40498H Brassica oleracea HOM05D006747 ORTHO05D008384 5.6e-68 262.3 233 54.1
Medtr1g069790 Medicago truncatula HOM05D006747 ORTHO05D008384 7.3e-68 261.9 281 49.8
Rhsim13G0036000 Rhododendron simsii HOM05D006747 ORTHO05D008384 7.3e-68 261.9 232 54.7
RcHm_v2.0_Chr6g0287851 Rosa chinensis HOM05D006747 ORTHO05D008384 9.5e-68 261.5 240 52.5
Os07g0458800 Oryza sativa ssp. japonica HOM05D006747 ORTHO05D008384 1.6e-67 260.8 240 55.8
Eucgr.B01566 Eucalyptus grandis HOM05D006747 ORTHO05D008384 2.1e-67 260.4 242 52.5
AUR62011854 Chenopodium quinoa HOM05D006747 ORTHO05D008384 2.8e-67 260.0 229 52.8
Duzib138G0743 Durio zibethinus HOM05D006747 ORTHO05D008384 2.8e-67 260.0 232 51.7
Manes.12G033600 Manihot esculenta HOM05D006747 ORTHO05D008384 3.6e-67 259.6 229 52.4
CSS0000886 Camellia sinensis var. sinensis HOM05D006747 ORTHO05D008384 4.7e-67 259.2 255 51.4
CARHR111050 Cardamine hirsuta HOM05D006747 ORTHO05D008384 6.1e-67 258.8 232 53.9
VMungo0720G1324 Vigna mungo HOM05D006747 ORTHO05D008384 6.1e-67 258.8 260 50.8
FAN20G2892 Fragaria x ananassa HOM05D006747 ORTHO05D008384 8.0e-67 258.5 276 47.8
Actinidia30159 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.0e-66 258.1 240 52.9
EL10As5g23483 Beta vulgaris HOM05D006747 ORTHO05D008384 1.0e-66 258.1 242 51.7
Cfa002442 Carpinus fangiana HOM05D006747 ORTHO05D008384 1.0e-66 258.1 240 51.7
Aqoxy2G03665 Aquilegia oxysepala HOM05D006747 ORTHO05D008384 1.4e-66 257.7 232 53.9
MD05G1195200 Malus domestica HOM05D006747 ORTHO05D008384 1.4e-66 257.7 274 48.9
FAN15G1911 Fragaria x ananassa HOM05D006747 ORTHO05D008384 1.8e-66 257.3 276 48.2
AL3G53500 Arabidopsis lyrata HOM05D006747 ORTHO05D008384 4.0e-66 256.1 232 53.0
FAN27G0389 Fragaria x ananassa HOM05D006747 ORTHO05D008384 5.2e-66 255.8 276 47.8
Lalb_Chr06g0170541 Lupinus albus HOM05D006747 ORTHO05D008384 8.9e-66 255.0 232 54.3
Carub.0003s3494 Capsella rubella HOM05D006747 ORTHO05D008384 2.6e-65 253.4 275 46.5
DCAR_012556 Daucus carota HOM05D006747 ORTHO05D008384 2.6e-65 253.4 232 52.2
HanXRQChr09g0254271 Helianthus annuus HOM05D006747 ORTHO05D008384 2.6e-65 253.4 243 51.4
Lj1C68G8 Lonicera japonica HOM05D003718 ORTHO05D004402 2.6e-65 253.4 215 57.7
Glyma.06G315300 Glycine max HOM05D006747 ORTHO05D008384 3.4e-65 253.1 263 51.3
PGSC0003DMG400025504 Solanum tuberosum HOM05D006747 ORTHO05D008384 3.4e-65 253.1 279 48.7
MSTRG.21486 Avicennia marina HOM05D006747 ORTHO05D008384 4.4e-65 252.7 240 53.8
AT2G20495 Arabidopsis thaliana HOM05D006747 ORTHO05D008384 7.5e-65 251.9 232 51.7
CANSAT01G1212 Cannabis sativa HOM05D006747 ORTHO05D008384 1.3e-64 251.1 269 46.8
Zm00001eb384950 Zea mays HOM05D006747 ORTHO05D008384 1.3e-64 251.1 232 55.2
Lsat_1_v5_gn_5_182940 Lactuca sativa HOM05D006747 ORTHO05D008384 1.7e-64 250.8 289 46.0
BcaB03g16845 Brassica carinata HOM05D006747 ORTHO05D008384 3.7e-64 249.6 233 51.5
CsaV3_7G027040 Cucumis sativus L. HOM05D006747 ORTHO05D008384 8.3e-64 248.4 232 51.7
PGR031G3840 Punica granatum HOM05D006747 ORTHO05D008384 2.4e-63 246.9 224 51.3
Haze_24648 Corylus avellana HOM05D006747 ORTHO05D008384 4.1e-63 246.1 271 47.2
Aa31LG8G17440 Aethionema arabicum HOM05D006747 ORTHO05D008384 5.4e-63 245.7 255 49.0
MELO3C012750.2 Cucumis melo HOM05D006747 ORTHO05D008384 9.2e-63 245.0 236 50.4
CiPaw.03G265900 Carya illinoinensis HOM05D006747 ORTHO05D008384 1.2e-62 244.6 295 44.4
SalBow4G0984 Salvia bowleyana HOM05D006747 ORTHO05D008384 1.6e-62 244.2 285 44.6
vmacro02672 Vaccinium macrocarpon HOM05D006747 ORTHO05D008384 3.5e-62 243.0 289 45.0
THA.LOC104804045 Tarenaya hassleriana HOM05D006747 ORTHO05D008384 7.8e-62 241.9 270 46.3
SGA_v2.0_scaffold138G35213 Striga asiatica HOM05D006747 ORTHO05D008384 1.7e-61 240.7 298 44.3
COL.COLO4_04026 Corchorus olitorius HOM05D006747 ORTHO05D008384 3.0e-61 240.0 302 42.7
Sc17g0000600 Simmondsia chinensis HOM05D006747 ORTHO05D008384 3.9e-61 239.6 212 53.3
AUR62024699 Chenopodium quinoa HOM05D006747 ORTHO05D008384 1.1e-60 238.0 213 51.6
unitig_8.g3882 Utricularia gibba HOM05D006747 ORTHO05D008384 3.6e-59 233.0 232 49.1
CAN.G941.16 Capsicum annuum HOM05D006747 ORTHO05D008384 5.2e-58 229.2 205 55.6
A07p00240 Brassica napus HOM05D006747 ORTHO05D008384 2.0e-57 227.3 232 49.1
HPP92_014756 Vanilla planifolia HOM05D006747 ORTHO05D008384 4.4e-57 226.1 211 52.1
Nn1g02801 Nelumbo nucifera HOM05D006747 ORTHO05D008384 1.3e-56 224.6 268 47.0
ECA248G1486 Erigeron canadensis HOM05D006747 ORTHO05D008384 4.1e-55 219.5 240 47.9
FAN24G2059 Fragaria x ananassa HOM05D006747 ORTHO05D008384 2.7e-54 216.9 248 45.2
PSO017G5775 Papaver somniferum HOM05D006747 ORTHO05D008384 2.7e-54 216.9 292 42.5
SMO115G0001 Selaginella moellendorffii HOM05D006747 ORTHO05D008384 7.8e-54 215.3 229 47.6
Hma1.2p1_0273F.1_g109550 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 7.3e-52 208.8 184 54.9
Prupe.8G221800 Prunus persica HOM05D006747 ORTHO05D008384 7.3e-52 208.8 274 41.2
Nitab4.5_0005593g0070 Nicotiana tabacum HOM05D006747 ORTHO05D008384 2.7e-46 190.3 213 47.4
Nitab4.5_0000326g0130 Nicotiana tabacum HOM05D006747 ORTHO05D008384 1.5e-44 184.5 240 44.6
Oeu035736.1 Olea europaea HOM05D006747 ORTHO05D008384 7.3e-44 182.2 175 51.4
HPP92_028089 Vanilla planifolia HOM05D006747 ORTHO05D008384 2.8e-43 180.3 168 53.0
ClCG09G008030 Citrullus lanatus HOM05D006747 ORTHO05D008384 1.5e-41 174.5 402 30.1
QL09p039580 Quercus lobata HOM05D006747 ORTHO05D008384 1.1e-34 151.8 148 51.4
Sed0026822 Sechium edule HOM05D006747 ORTHO05D008384 7.6e-33 145.6 170 46.5
Ca_09674_v3 Cicer arietinum L. HOM05D006747 ORTHO05D008384 3.9e-29 133.3 157 47.1
FvH4_2g21270 Fragaria vesca HOM05D006747 ORTHO05D008384 1.7e-24 117.9 135 45.2
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 4.2e-23 113.2 90 53.3
SEGI_35883 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 2.1e-22 110.9 89 53.9
SEGI_30594 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 1.4e-18 98.2 98 46.9
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 2.9e-16 90.5 72 55.6
arahy.Tifrunner.gnm1.ann1.K1LLW7 Arachis hypogaea HOM05D006747 ORTHO05D008384 3.0e-13 80.5 57 63.2
Cre07.g348951 Chlamydomonas reinhardtii HOM05D006747 ORTHO05D008384 2.1e-11 74.3 108 36.1
SEGI_37670 Sequoiadendron giganteum HOM05D006747 ORTHO05D008384 4.8e-11 73.2 52 71.2
MD10G1182200 Malus domestica HOM05D006747 ORTHO05D008384 6.9e-10 69.3 70 47.1
Cpa.g.sc165.14 Carica papaya HOM05D006747 ORTHO05D008384 2.0e-09 67.8 45 68.9
Hma1.2p1_0273F.1_g109560 Hydrangea macrophylla HOM05D006747 ORTHO05D008384 1.3e-08 65.1 75 42.7
Actinidia34415 Actinidia chinensis HOM05D006747 ORTHO05D008384 1.2e-06 58.5 54 50.0
Duzib133G0415 Durio zibethinus HOM05D006747 ORTHO05D008384 6.1e-06 56.2 49 51.0


User provided reference genes

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