Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 6.2e-244 847.0 434 100.0
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 1.9e-147 526.6 409 65.0
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 5.1e-145 518.5 410 62.9
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 5.1e-145 518.5 405 64.2
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 1.1e-144 517.3 441 59.6
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 1.1e-144 517.3 401 65.8
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 1.6e-143 513.5 405 63.7
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 3.6e-143 512.3 400 63.0
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 1.1e-142 510.8 415 61.9
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 1.4e-142 510.4 408 63.0
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 1.8e-142 510.0 416 63.0
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 3.1e-142 509.2 415 62.2
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 4.0e-142 508.8 413 62.2
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 5.3e-142 508.4 404 61.9
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 5.3e-142 508.4 409 62.1
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 6.9e-142 508.1 398 64.1
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 1.2e-141 507.3 404 62.1
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 1.5e-141 506.9 404 61.6
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 2.0e-141 506.5 427 60.4
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 2.0e-141 506.5 406 62.8
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 3.4e-141 505.8 401 65.8
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 3.4e-141 505.8 401 61.3
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 3.4e-141 505.8 410 62.2
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 4.4e-141 505.4 406 61.3
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 5.8e-141 505.0 408 62.3
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 7.6e-141 504.6 401 62.3
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 9.9e-141 504.2 413 62.5
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 9.9e-141 504.2 392 65.1
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 9.9e-141 504.2 403 62.3
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 1.3e-140 503.8 417 60.2
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 1.3e-140 503.8 407 62.4
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 1.7e-140 503.4 409 62.1
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 1.7e-140 503.4 401 62.6
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 2.9e-140 502.7 401 64.3
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 6.4e-140 501.5 401 61.3
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 8.4e-140 501.1 421 60.6
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 8.4e-140 501.1 421 60.6
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 1.9e-139 500.0 420 60.7
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 2.4e-139 499.6 403 62.0
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 2.4e-139 499.6 397 64.0
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 3.2e-139 499.2 435 60.5
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 3.2e-139 499.2 428 60.3
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 4.2e-139 498.8 398 62.3
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 4.2e-139 498.8 433 59.8
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 4.2e-139 498.8 428 59.8
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 5.4e-139 498.4 421 60.1
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 9.3e-139 497.7 421 60.3
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 9.3e-139 497.7 401 61.6
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.2e-138 497.3 415 61.2
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 2.1e-138 496.5 391 64.2
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 2.7e-138 496.1 409 62.3
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 3.5e-138 495.7 406 62.8
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 6.0e-138 495.0 422 59.2
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 5.1e-137 491.9 431 59.4
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 5.1e-137 491.9 426 60.3
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 8.7e-137 491.1 436 58.5
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 8.7e-137 491.1 401 61.8
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 1.1e-136 490.7 422 60.4
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 1.5e-136 490.3 429 60.4
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 2.5e-136 489.6 412 60.4
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 5.6e-136 488.4 436 58.3
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 5.6e-136 488.4 430 58.4
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 7.3e-136 488.0 432 59.0
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 1.3e-135 487.3 428 60.0
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 1.6e-135 486.9 419 60.6
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 1.6e-135 486.9 398 61.8
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 2.8e-135 486.1 419 59.4
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 8.1e-135 484.6 425 59.8
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 8.1e-135 484.6 404 60.6
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 1.4e-134 483.8 416 58.9
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 1.8e-134 483.4 401 60.1
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 4.0e-134 482.3 390 63.8
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 4.0e-134 482.3 407 60.9
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 1.2e-133 480.7 428 59.6
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 2.0e-133 479.9 427 58.3
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 2.6e-133 479.6 394 60.9
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 2.6e-133 479.6 430 57.4
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 9.9e-133 477.6 408 60.5
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 1.7e-132 476.9 384 62.5
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 8.4e-132 474.6 417 58.5
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 8.4e-132 474.6 410 58.5
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 4.2e-131 472.2 406 60.6
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 1.2e-130 470.7 421 57.2
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 2.1e-130 469.9 379 61.7
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 1.9e-128 463.4 456 53.5
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 3.3e-128 462.6 386 59.8
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 4.3e-128 462.2 415 57.8
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 2.2e-124 449.9 409 56.7
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 6.4e-124 448.4 390 59.7
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 3.9e-121 439.1 494 49.2
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 8.2e-119 431.4 389 58.9
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 1.1e-118 431.0 403 55.3
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 1.1e-118 431.0 403 55.3
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 4.2e-115 419.1 346 61.6
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 2.7e-114 416.4 336 64.0
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 2.6e-109 399.8 316 63.9
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 4.5e-109 399.1 393 55.5
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 7.4e-104 381.7 324 59.6
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 2.0e-101 373.6 297 63.0
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 1.0e-100 371.3 285 66.0
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 1.8e-97 360.5 422 50.5
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 1.4e-94 350.9 429 48.0
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 2.1e-90 337.0 389 47.8
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 3.6e-90 336.3 316 56.6
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.1e-83 314.7 255 63.5
PRCOL_00006487 Prasinoderma coloniale HOM05D001496 ORTHO05D007453 5.2e-81 305.8 389 47.8
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 3.7e-71 273.1 331 49.2
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.1e-70 271.6 208 67.8
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 9.5e-67 258.5 191 68.6
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 1.8e-65 254.2 386 39.6
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 4.6e-61 239.6 210 56.7
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 6.6e-44 182.6 119 71.4
Gohir.A05G239300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 6.2e-42 176.0 135 65.2
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 5.8e-40 169.5 110 71.8
Gohir.A01G111300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 4.7e-34 149.8 119 63.9
Gohir.A02G071100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.2e-32 145.2 119 62.2
Gohir.A12G153600 Gossypium hirsutum HOM05D001496 ORTHO05D007453 5.8e-32 142.9 119 61.3
Os01g0172000 Oryza sativa ssp. japonica HOM05D001496 ORTHO05D007453 1.1e-30 138.7 124 58.1
Gohir.A07G160700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.3e-28 131.7 102 63.7
BraA03t11820Z Brassica rapa HOM05D001496 ORTHO05D007453 4.8e-26 123.2 87 66.7
A03p26050 Brassica napus HOM05D000073 ORTHO05D000033 1.4e-25 121.7 87 65.5
SEGI_31251 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 1.4e-22 111.7 79 68.4
MBI19_g29447_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 1.2e-21 108.6 91 61.5
MBI14_g09685_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 6.6e-20 102.8 100 59.0
SEGI_39661 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 2.5e-19 100.9 78 56.4
BolC3t15455H Brassica oleracea HOM05D001496 ORTHO05D007453 2.2e-15 87.8 104 46.2
FAN27G2092 Fragaria x ananassa HOM05D001496 ORTHO05D007453 7.1e-14 82.8 89 50.6
C03p31050 Brassica napus HOM05D001496 ORTHO05D007453 1.6e-13 81.6 106 44.3
QL02p058842 Quercus lobata HOM05D001496 ORTHO05D000125 2.1e-13 81.3 49 69.4
QL02p059219 Quercus lobata HOM05D001496 ORTHO05D007453 9.6e-11 72.4 51 64.7
HanXRQChr05g0138141 Helianthus annuus HOM05D001496 ORTHO05D007453 6.9e-09 66.2 41 68.3
Actinidia02729 Actinidia chinensis HOM05D001496 ORTHO05D007453 1.5e-08 65.1 214 34.1
Gohir.A01G167500 Gossypium hirsutum HOM05D001496 ORTHO05D047734 3.4e-08 63.9 41 68.3


User provided reference genes

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