Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_6350 Physcomitrium patens HOM05D007853 ORTHO05D009873 1.7e-142 509.2 246 100.0
Mapoly0119s0021 Marchantia polymorpha HOM05D007853 ORTHO05D009873 9.0e-22 108.2 259 29.0
RcHm_v2.0_Chr6g0285141 Rosa chinensis HOM05D007853 ORTHO05D009873 2.2e-20 103.6 243 29.2
ATR0787G102 Amborella trichopoda HOM05D007853 ORTHO05D009873 3.8e-20 102.8 254 29.5
FvH4_2g19330 Fragaria vesca HOM05D007853 ORTHO05D009873 8.4e-20 101.7 255 28.2
Cfa002555 Carpinus fangiana HOM05D007853 ORTHO05D009873 1.1e-19 101.3 255 26.3
Prupe.8G204900 Prunus persica HOM05D007853 ORTHO05D009873 1.9e-19 100.5 260 28.8
FAN24G3434 Fragaria x ananassa HOM05D007853 ORTHO05D009873 9.3e-19 98.2 253 28.1
FAN27G0897 Fragaria x ananassa HOM05D007853 ORTHO05D009873 1.6e-18 97.4 259 28.6
MBI10_g16828_MAGBIO Magnolia biondii HOM05D007853 ORTHO05D009873 1.6e-18 97.4 250 28.4
Mapoly0119s0024 Marchantia polymorpha HOM05D007853 ORTHO05D009873 2.7e-18 96.7 261 29.5
SEGI_02257 Sequoiadendron giganteum HOM05D007853 ORTHO05D009873 4.6e-18 95.9 255 27.5
FAN15G1839 Fragaria x ananassa HOM05D007853 ORTHO05D009873 6.0e-18 95.5 257 27.6
CiPaw.04G106700 Carya illinoinensis HOM05D007853 ORTHO05D009873 1.0e-17 94.7 251 27.5
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.0e-17 94.7 243 28.4
Ciclev10020523m.g Citrus clementina HOM05D007853 ORTHO05D009873 3.0e-17 93.2 259 27.4
Pp3c10_6380 Physcomitrium patens HOM05D007853 ORTHO05D009873 3.0e-17 93.2 259 29.7
vmacro14766 Vaccinium macrocarpon HOM05D007853 ORTHO05D009873 3.9e-17 92.8 259 27.4
Lj1g0009384 Lotus japonicus HOM05D007853 ORTHO05D009873 1.1e-16 91.3 246 26.4
MD05G1178400 Malus domestica HOM05D007853 ORTHO05D009873 3.3e-16 89.7 260 27.3
Thecc.01G228200 Theobroma cacao HOM05D007853 ORTHO05D009873 4.3e-16 89.4 253 28.5
TAR636G2687 Trochodendron aralioides HOM05D007853 ORTHO05D009873 4.3e-16 89.4 249 27.7
CAN.G771.60 Capsicum annuum HOM05D007853 ORTHO05D009873 7.4e-16 88.6 240 25.8
Pp3c2_14180 Physcomitrium patens HOM05D007853 ORTHO05D009873 7.4e-16 88.6 251 27.1
Manes.12G041900 Manihot esculenta HOM05D007853 ORTHO05D009873 1.6e-15 87.4 248 25.8
Duzib133G0551 Durio zibethinus HOM05D007853 ORTHO05D009873 2.1e-15 87.0 253 26.9
Medtr0197s0070 Medicago truncatula HOM05D007853 ORTHO05D009873 2.8e-15 86.7 255 26.3
Medtr7g059040 Medicago truncatula HOM05D007853 ORTHO05D009873 2.8e-15 86.7 255 26.3
Sp3g22500 Schrenkiella parvula HOM05D007853 ORTHO05D009873 2.8e-15 86.7 245 26.9
AL3G40490 Arabidopsis lyrata HOM05D007853 ORTHO05D009873 4.8e-15 85.9 245 26.5
Dinv04666 Davidia involucrata HOM05D007853 ORTHO05D009873 4.8e-15 85.9 250 26.4
Mapoly0098s0011 Marchantia polymorpha HOM05D007853 ORTHO05D009873 4.8e-15 85.9 257 28.0
QL09p044713 Quercus lobata HOM05D007853 ORTHO05D009873 4.8e-15 85.9 258 26.4
VMungo1383G0232 Vigna mungo HOM05D007853 ORTHO05D009873 4.8e-15 85.9 250 28.4
CiPaw.03G151300 Carya illinoinensis HOM05D007853 ORTHO05D009873 6.2e-15 85.5 259 27.0
Lj1C83T5 Lonicera japonica HOM05D007853 ORTHO05D009873 6.2e-15 85.5 247 28.3
GSVIVG01028563001 Vitis vinifera HOM05D007853 ORTHO05D009873 6.2e-15 85.5 247 26.7
Gohir.A11G136300 Gossypium hirsutum HOM05D007853 ORTHO05D009873 1.1e-14 84.7 247 27.1
Sopen06g034930 Solanum pennellii HOM05D007853 ORTHO05D009873 1.1e-14 84.7 247 27.9
TWI18G0437 Tripterygium wilfordii HOM05D007853 ORTHO05D009873 1.1e-14 84.7 257 24.9
CSS0040524 Camellia sinensis var. sinensis HOM05D007853 ORTHO05D009873 1.4e-14 84.3 245 26.9
PGSC0003DMG400020089 Solanum tuberosum HOM05D007853 ORTHO05D009873 1.4e-14 84.3 249 27.3
Lalb_Chr03g0041891 Lupinus albus HOM05D007853 ORTHO05D009873 1.8e-14 84.0 254 25.2
Oeu015462.1 Olea europaea HOM05D007853 ORTHO05D009873 1.8e-14 84.0 254 26.0
Phvul.008G123400 Phaseolus vulgaris HOM05D007853 ORTHO05D009873 1.8e-14 84.0 250 27.6
AT3G24760 Arabidopsis thaliana HOM05D007853 ORTHO05D009873 3.1e-14 83.2 245 26.9
DCAR_000536 Daucus carota HOM05D007853 ORTHO05D009873 3.1e-14 83.2 242 27.3
BcaC06g35750 Brassica carinata HOM05D007853 ORTHO05D009873 4.0e-14 82.8 243 28.8
C07p11280 Brassica napus HOM05D007853 ORTHO05D009873 4.0e-14 82.8 243 28.4
BolC7t41605H Brassica oleracea HOM05D007853 ORTHO05D009873 4.0e-14 82.8 243 28.8
Psat3g143800 Pisum sativum HOM05D007853 ORTHO05D009873 4.0e-14 82.8 246 24.8
PGR044G1509 Punica granatum HOM05D007853 ORTHO05D009873 4.0e-14 82.8 264 25.0
Actinidia23732 Actinidia chinensis HOM05D007853 ORTHO05D009873 5.3e-14 82.4 257 26.5
ClCG09G009130 Citrullus lanatus HOM05D007853 ORTHO05D009873 6.9e-14 82.0 253 25.3
Gohir.D11G142600 Gossypium hirsutum HOM05D007853 ORTHO05D009873 6.9e-14 82.0 247 26.7
Solyc06g083550.1 Solanum lycopersicum HOM05D007853 ORTHO05D009873 6.9e-14 82.0 240 26.2
Gorai.007G152900 Gossypium raimondii HOM05D007853 ORTHO05D009873 9.0e-14 81.6 247 26.7
HanXRQChr01g0014671 Helianthus annuus HOM05D007853 ORTHO05D009873 9.0e-14 81.6 143 32.2
Lsat_1_v5_gn_5_179800 Lactuca sativa HOM05D007853 ORTHO05D009873 9.0e-14 81.6 264 25.8
TPR.G15291 Trifolium pratense HOM05D007853 ORTHO05D009873 1.2e-13 81.3 255 25.9
A07p07510 Brassica napus HOM05D007853 ORTHO05D009873 2.0e-13 80.5 243 28.0
BraA07t28542Z Brassica rapa HOM05D007853 ORTHO05D009873 2.0e-13 80.5 243 28.0
Actinidia09494 Actinidia chinensis HOM05D007853 ORTHO05D009873 2.6e-13 80.1 256 25.8
BcaB06g26693 Brassica carinata HOM05D007853 ORTHO05D009873 4.5e-13 79.3 243 27.2
Mapoly0115s0063 Marchantia polymorpha HOM05D007853 ORTHO05D009873 4.5e-13 79.3 243 25.5
Thhalv10002571m.g Eutrema salsugineum HOM05D007853 ORTHO05D009873 9.9e-13 78.2 245 26.5
Glyma.18G173200 Glycine max HOM05D007853 ORTHO05D009873 9.9e-13 78.2 250 26.4
THA.LOC104804604 Tarenaya hassleriana HOM05D007853 ORTHO05D009873 1.3e-12 77.8 250 26.8
Ca_07539_v3 Cicer arietinum L. HOM05D007853 ORTHO05D009873 3.8e-12 76.3 248 25.0
Glyma.08G356100 Glycine max HOM05D007853 ORTHO05D009873 3.8e-12 76.3 246 26.8
CARHR101120 Cardamine hirsuta HOM05D007853 ORTHO05D009873 6.4e-12 75.5 247 26.3
Aa31LG8G11920 Aethionema arabicum HOM05D007853 ORTHO05D009873 1.9e-11 73.9 248 25.0
Carub.0003s2515 Capsella rubella HOM05D007853 ORTHO05D009873 5.5e-11 72.4 245 24.5
AagrBONN_evm.TU.Sc2ySwM_228.846 Anthoceros agrestis HOM05D002809 ORTHO05D004939 3.9e-09 66.2 252 24.6
CDE06G1150 Ceratophyllum demersum HOM05D004907 ORTHO05D005707 5.1e-09 65.9 233 24.5
CSS0001528 Camellia sinensis var. sinensis HOM05D004907 ORTHO05D005707 6.7e-09 65.5 248 27.0
SEGI_08843 Sequoiadendron giganteum HOM05D007853 ORTHO05D009873 4.3e-08 62.8 244 24.2
Carub.0001s2297 Capsella rubella HOM05D004907 ORTHO05D005707 2.1e-07 60.5 128 29.7
Haze_24777 Corylus avellana HOM05D007853 ORTHO05D009873 2.8e-07 60.1 100 30.0
TAR374G1110 Trochodendron aralioides HOM05D004907 ORTHO05D005707 2.8e-07 60.1 248 24.2
Actinidia08149 Actinidia chinensis HOM05D004907 ORTHO05D005707 8.1e-07 58.5 146 28.1
Mapoly0005s0140 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.1e-06 58.2 248 22.6
Peaxi162Scf00517g00042 Petunia axillaris HOM05D007853 ORTHO05D009873 1.1e-06 58.2 90 31.1
Hma1.2p1_0223F.1_g094330 Hydrangea macrophylla HOM05D004907 ORTHO05D005707 1.4e-06 57.8 252 27.8
Actinidia27794 Actinidia chinensis HOM05D004907 ORTHO05D005707 1.8e-06 57.4 171 26.9
SMO116G0409 Selaginella moellendorffii HOM05D002809 ORTHO05D004563 2.4e-06 57.0 248 22.2
Mapoly0019s0019 Marchantia polymorpha HOM05D002809 ORTHO05D004563 5.3e-06 55.8 183 24.6
Prupe.1G249900 Prunus persica HOM05D004907 ORTHO05D005707 6.9e-06 55.5 247 23.5


User provided reference genes

Program Settings