Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.5e-136 489.6 256 100.0
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 6.8e-97 357.8 238 75.6
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 2.1e-66 256.5 253 53.4
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 1.1e-62 244.2 236 50.4
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 7.8e-61 238.0 236 50.8
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 7.8e-61 238.0 236 51.3
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 1.3e-60 237.3 242 48.8
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 1.3e-60 237.3 242 48.3
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 2.3e-60 236.5 242 45.5
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 3.9e-60 235.7 242 48.3
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 3.9e-60 235.7 248 48.4
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 3.9e-60 235.7 242 47.1
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 5.1e-60 235.3 242 45.5
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 5.1e-60 235.3 242 47.9
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 1.1e-59 234.2 236 47.9
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 1.1e-59 234.2 248 46.4
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.5e-59 233.8 236 48.7
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 1.9e-59 233.4 236 48.7
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 2.5e-59 233.0 242 45.0
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 2.5e-59 233.0 252 48.8
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 3.3e-59 232.6 250 48.0
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 3.3e-59 232.6 250 48.0
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 4.3e-59 232.3 239 50.6
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 5.6e-59 231.9 241 48.1
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 5.6e-59 231.9 242 46.7
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 7.3e-59 231.5 242 47.1
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 7.3e-59 231.5 236 47.9
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 9.5e-59 231.1 249 47.0
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 1.2e-58 230.7 248 47.6
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 1.2e-58 230.7 242 47.5
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 1.6e-58 230.3 235 48.5
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 1.6e-58 230.3 242 47.9
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 2.1e-58 229.9 242 47.1
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 2.1e-58 229.9 242 45.9
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 2.8e-58 229.6 242 47.5
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 3.6e-58 229.2 242 47.1
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 3.6e-58 229.2 236 47.5
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 3.6e-58 229.2 242 46.7
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 3.6e-58 229.2 236 47.9
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 4.7e-58 228.8 242 47.5
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 4.7e-58 228.8 242 46.3
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 4.7e-58 228.8 248 45.2
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 6.2e-58 228.4 236 49.2
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 1.1e-57 227.6 242 47.1
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 1.1e-57 227.6 236 47.5
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 1.8e-57 226.9 236 47.5
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 1.8e-57 226.9 251 46.2
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 1.8e-57 226.9 251 46.2
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 2.4e-57 226.5 236 47.9
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 2.4e-57 226.5 236 47.9
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 3.1e-57 226.1 240 45.8
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 3.1e-57 226.1 242 46.3
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 4.0e-57 225.7 237 47.3
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 4.0e-57 225.7 237 47.7
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 4.0e-57 225.7 237 47.7
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 4.0e-57 225.7 236 47.5
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 5.2e-57 225.3 242 46.3
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 6.8e-57 224.9 237 46.4
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 6.8e-57 224.9 242 46.3
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 6.8e-57 224.9 236 47.5
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 6.8e-57 224.9 230 50.4
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 8.9e-57 224.6 240 47.1
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 8.9e-57 224.6 237 46.4
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 8.9e-57 224.6 237 46.4
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 8.9e-57 224.6 237 46.4
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 8.9e-57 224.6 242 45.9
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 8.9e-57 224.6 242 45.0
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 8.9e-57 224.6 230 50.4
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 1.2e-56 224.2 237 46.4
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 1.2e-56 224.2 258 45.7
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 1.2e-56 224.2 236 46.6
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.5e-56 223.8 236 47.9
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 1.5e-56 223.8 237 46.8
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 3.4e-56 222.6 235 48.1
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 4.4e-56 222.2 243 44.4
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 7.6e-56 221.5 236 45.8
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 1.7e-55 220.3 237 45.6
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 2.9e-55 219.5 241 45.2
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 2.9e-55 219.5 237 47.7
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 8.4e-55 218.0 242 44.2
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 1.1e-54 217.6 235 47.7
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 1.6e-53 213.8 230 45.7
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 7.8e-53 211.5 236 47.0
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 1.7e-52 210.3 237 44.7
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 3.0e-52 209.5 257 45.1
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 6.6e-52 208.4 236 44.5
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 6.6e-52 208.4 242 43.0
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 3.6e-50 202.6 213 49.3
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 6.9e-49 198.4 208 47.1
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 1.2e-48 197.6 203 49.8
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.2e-48 197.6 220 46.4
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 1.7e-47 193.7 236 43.2
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 4.9e-47 192.2 251 41.0
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 2.7e-45 186.4 213 46.5
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 3.0e-44 183.0 182 50.0
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 3.9e-44 182.6 185 46.5
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 5.6e-43 178.7 236 40.7
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 7.3e-43 178.3 200 46.5
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 4.8e-42 175.6 239 39.7
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 1.8e-41 173.7 255 38.4
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 4.0e-41 172.6 186 43.5
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 1.5e-40 170.6 247 41.7
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 1.1e-35 154.5 242 36.4
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 9.0e-33 144.8 147 45.6
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 6.0e-29 132.1 115 53.0
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 1.3e-28 131.0 120 51.7
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 2.3e-28 130.2 148 44.6
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 1.1e-27 127.9 140 45.7
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 1.1e-27 127.9 140 45.7
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 1.5e-27 127.5 111 54.1
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 3.7e-26 122.9 232 37.1
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 2.4e-25 120.2 147 39.5
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 6.9e-25 118.6 198 37.4
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 1.0e-23 114.8 90 58.9
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 2.4e-17 93.6 88 50.0
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 2.0e-16 90.5 118 39.8
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 2.6e-16 90.1 70 55.7
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 1.7e-15 87.4 85 48.2
PRCOL_00006256 Prasinoderma coloniale HOM05D006537 ORTHO05D008186 1.5e-11 74.3 149 31.5


User provided reference genes

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