Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_5740 Physcomitrium patens HOM05D000593 ORTHO05D000562 1.6e-126 456.1 221 100.0
Mapoly0054s0101 Marchantia polymorpha HOM05D000593 ORTHO05D000562 8.6e-32 141.4 196 38.3
Hma1.2p1_2393F.1_g321260 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 6.8e-21 105.1 158 34.2
Hma1.2p1_2537F.1_g324080 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.0e-20 103.6 158 33.5
Hma1.2p1_3726F.1_g337390 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.0e-20 103.6 158 33.5
Hma1.2p1_0200F.1_g086095 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 5.8e-20 102.1 190 32.6
Hma1.2p1_0661F.1_g197880 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 5.8e-20 102.1 158 33.5
FvH4_4g15922 Fragaria vesca HOM05D000593 ORTHO05D000562 7.5e-20 101.7 159 34.0
Dinv29499 Davidia involucrata HOM05D002092 ORTHO05D000562 2.2e-19 100.1 188 31.4
ECA240G3974 Erigeron canadensis HOM05D000398 ORTHO05D007380 2.2e-19 100.1 196 32.1
Hma1.2p1_0362F.1_g136030 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.2e-19 100.1 214 32.2
ECA247G0154 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.9e-19 99.8 196 31.1
Mapoly0055s0046 Marchantia polymorpha HOM05D000593 ORTHO05D000562 2.9e-19 99.8 171 33.3
RcHm_v2.0_Chr4g0385841 Rosa chinensis HOM05D000593 ORTHO05D000562 3.7e-19 99.4 203 30.0
FvH4_3g28681 Fragaria vesca HOM05D000593 ORTHO05D000562 6.4e-19 98.6 203 30.0
Rhsim06G0070800 Rhododendron simsii HOM05D000593 ORTHO05D000562 1.9e-18 97.1 156 33.3
Mapoly0010s0039 Marchantia polymorpha HOM05D000593 ORTHO05D000562 2.4e-18 96.7 219 29.2
Mapoly0020s0096 Marchantia polymorpha HOM05D000593 ORTHO05D000562 2.4e-18 96.7 173 30.1
Hma1.2p1_1305F.1_g274530 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 4.1e-18 95.9 158 32.3
Rhsim09G0113400 Rhododendron simsii HOM05D000593 ORTHO05D000562 5.4e-18 95.5 199 30.7
Hma1.2p1_0312F.1_g121360 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 7.1e-18 95.1 162 31.5
RcHm_v2.0_Chr1g0341531 Rosa chinensis HOM05D000593 ORTHO05D000562 2.1e-17 93.6 229 28.8
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 2.7e-17 93.2 180 32.2
Rhsim13G0144200 Rhododendron simsii HOM05D000593 ORTHO05D000562 2.7e-17 93.2 201 27.9
Mapoly0060s0099 Marchantia polymorpha HOM05D000593 ORTHO05D000562 3.5e-17 92.8 141 38.3
Pp3c11_24740 Physcomitrium patens HOM05D000593 ORTHO05D000562 3.5e-17 92.8 196 26.0
Rhsim03G0114700 Rhododendron simsii HOM05D000593 ORTHO05D000562 1.0e-16 91.3 199 29.6
Rhsim07G0040700 Rhododendron simsii HOM05D000593 ORTHO05D000562 1.0e-16 91.3 182 31.9
Rhsim04G0076600 Rhododendron simsii HOM05D000030 ORTHO05D000009 1.3e-16 90.9 200 31.0
Prupe.7G144600 Prunus persica HOM05D000593 ORTHO05D000562 1.7e-16 90.5 180 32.2
Rhsim04G0198300 Rhododendron simsii HOM05D000593 ORTHO05D000562 1.7e-16 90.5 156 34.0
Hma1.2p1_2691F.1_g327000 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.3e-16 90.1 159 31.4
Aqoxy2G01181 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 8.6e-16 88.2 162 32.1
Rhsim06G0117200 Rhododendron simsii HOM05D000593 ORTHO05D000562 1.1e-15 87.8 156 32.7
Pp3c5_649 Physcomitrium patens HOM05D000593 ORTHO05D000562 1.5e-15 87.4 207 25.6
Mapoly0052s0124 Marchantia polymorpha HOM05D000593 ORTHO05D000562 2.5e-15 86.7 201 29.9
Mapoly0138s0003 Marchantia polymorpha HOM05D000593 ORTHO05D000562 2.5e-15 86.7 158 32.3
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.6e-15 85.5 184 28.3
TWI56G1041 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.7e-14 82.4 158 30.4
Rhsim06G0076500 Rhododendron simsii HOM05D000593 ORTHO05D000562 6.2e-14 82.0 120 38.3
TWI79G0388 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.1e-13 81.3 185 29.2
Aqoxy4G00841 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.4e-13 80.9 184 27.2
AUR62042573 Chenopodium quinoa HOM05D000593 ORTHO05D000562 5.2e-13 79.0 133 33.1
EL10Ac2g02647 Beta vulgaris HOM05D000593 ORTHO05D000562 6.8e-13 78.6 177 27.1
ECA236G3455 Erigeron canadensis HOM05D000593 ORTHO05D000562 6.8e-13 78.6 177 28.2
Rhsim09G0181600 Rhododendron simsii HOM05D000518 ORTHO05D000562 6.8e-13 78.6 181 29.3
PSO170G3669 Papaver somniferum HOM05D000593 ORTHO05D000562 8.9e-13 78.2 161 30.4
Aqoxy5G01684 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.5e-12 77.4 183 29.0
EL10Ac9g21154 Beta vulgaris HOM05D000593 ORTHO05D000562 1.5e-12 77.4 177 27.1
FvH4_7g04391 Fragaria vesca HOM05D000593 ORTHO05D000562 1.5e-12 77.4 185 26.5
AUR62015706 Chenopodium quinoa HOM05D012566 ORTHO05D000562 2.6e-12 76.6 87 43.7
ECA234G4851 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.6e-12 76.6 239 25.1
PSO675G7774 Papaver somniferum HOM05D000593 ORTHO05D000562 3.4e-12 76.3 161 29.2
Rhsim01G0017600 Rhododendron simsii HOM05D000593 ORTHO05D000562 3.4e-12 76.3 115 34.8
AUR62008504 Chenopodium quinoa HOM05D012566 ORTHO05D000562 4.4e-12 75.9 87 43.7
PSO541G2752 Papaver somniferum HOM05D000593 ORTHO05D000562 5.8e-12 75.5 186 25.8
PSO832G2496 Papaver somniferum HOM05D000593 ORTHO05D000562 5.8e-12 75.5 161 28.0
TWI73G0387 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.8e-12 75.5 158 26.6
TWI56G0917 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.6e-12 75.1 182 25.8
AUR62015704 Chenopodium quinoa HOM05D012566 ORTHO05D000562 9.9e-12 74.7 82 46.3
Mapoly0002s0252 Marchantia polymorpha HOM05D000593 ORTHO05D000562 9.9e-12 74.7 156 28.8
Aqoxy4G01994 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.3e-11 74.3 186 28.0
Hma1.2p1_0111F.1_g053590 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.3e-11 74.3 219 26.5
PSO063G7449 Papaver somniferum HOM05D000593 ORTHO05D000562 1.7e-11 73.9 164 27.4
RcHm_v2.0_Chr1g0329481 Rosa chinensis HOM05D000593 ORTHO05D000562 1.7e-11 73.9 185 25.4
TWI12G1095 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.7e-11 73.9 158 25.9
PSO541G6383 Papaver somniferum HOM05D000593 ORTHO05D000562 2.2e-11 73.6 176 25.0
PSO832G0356 Papaver somniferum HOM05D000593 ORTHO05D000562 2.2e-11 73.6 161 27.3
PSO675G4112 Papaver somniferum HOM05D000593 ORTHO05D000562 2.9e-11 73.2 156 26.3
CSS0048160 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.8e-11 72.8 184 27.2
Ah.01g016390 Amaranthus hybridus HOM05D000593 ORTHO05D000562 4.9e-11 72.4 187 26.2
TWI38G0853 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.9e-11 72.4 186 26.3
TWI56G1244 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.9e-11 72.4 158 31.0
PSO724G1093 Papaver somniferum HOM05D000593 ORTHO05D000562 6.4e-11 72.0 185 26.5
Aqoxy2G01165 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 8.4e-11 71.6 176 27.3
TWI75G0252 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 8.4e-11 71.6 162 27.2
MD05G1031400 Malus domestica HOM05D000593 ORTHO05D000562 1.1e-10 71.2 188 26.1
PSO832G3255 Papaver somniferum HOM05D000593 ORTHO05D000562 1.1e-10 71.2 173 25.4
PSO832G1919 Papaver somniferum HOM05D000593 ORTHO05D000562 1.4e-10 70.9 161 26.1
PSO386G0280 Papaver somniferum HOM05D000593 ORTHO05D000562 1.9e-10 70.5 185 25.4
Ah.01g016220 Amaranthus hybridus HOM05D012566 ORTHO05D000562 2.4e-10 70.1 187 27.8
PSO063G1358 Papaver somniferum HOM05D000593 ORTHO05D000562 2.4e-10 70.1 174 24.7
TWI38G2130 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.4e-10 70.1 160 28.1
PSO585G0009 Papaver somniferum HOM05D000593 ORTHO05D000562 3.2e-10 69.7 158 26.6
TWI12G0007 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.2e-10 69.7 158 25.3
TWI36G1372 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.2e-10 69.7 145 27.6
TWI38G0345 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.2e-10 69.7 160 27.5
FvH4_1g20063 Fragaria vesca HOM05D000593 ORTHO05D000562 4.1e-10 69.3 81 43.2
PSO591G0063 Papaver somniferum HOM05D000593 ORTHO05D000562 5.4e-10 68.9 172 25.6
TWI09G0326 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.4e-10 68.9 184 26.1
Atru.chr11.22 Acer truncatum HOM05D000593 ORTHO05D000562 7.1e-10 68.6 184 29.9
MD10G1032900 Malus domestica HOM05D000593 ORTHO05D000562 7.1e-10 68.6 186 27.4
Atru.chr11.19 Acer truncatum HOM05D000593 ORTHO05D000562 9.2e-10 68.2 184 29.9
CSS0015084 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.2e-09 67.8 194 28.4
FvH4_2g15231 Fragaria vesca HOM05D000593 ORTHO05D000562 1.2e-09 67.8 180 29.4
RcHm_v2.0_Chr3g0494701 Rosa chinensis HOM05D000593 ORTHO05D000562 1.2e-09 67.8 81 39.5
TWI32G0746 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.2e-09 67.8 184 27.7
PSO063G3326 Papaver somniferum HOM05D000593 ORTHO05D000562 1.6e-09 67.4 186 29.0
PSO675G4622 Papaver somniferum HOM05D000593 ORTHO05D000562 1.6e-09 67.4 186 24.2
TWI36G0859 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.1e-09 67.0 155 26.5
PSO063G3477 Papaver somniferum HOM05D000593 ORTHO05D000562 2.7e-09 66.6 162 26.5
TWI79G1065 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.7e-09 66.6 184 23.4
PSO591G0347 Papaver somniferum HOM05D000593 ORTHO05D000562 3.5e-09 66.2 165 24.8
TWI63G0793 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.5e-09 66.2 184 23.4
TWI63G1264 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.5e-09 66.2 184 23.4
PSO386G0211 Papaver somniferum HOM05D000593 ORTHO05D000562 4.6e-09 65.9 185 24.3
Migut.D01884 Erythranthe guttata HOM05D000593 ORTHO05D000562 6.0e-09 65.5 141 29.1
TWI75G1234 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.0e-09 65.5 160 24.4
TWI56G0914 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.8e-09 65.1 158 23.4
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.8e-09 65.1 158 25.3
Aqoxy7G02090 Aquilegia oxysepala HOM05D000593 ORTHO05D000562 1.3e-08 64.3 104 33.7
TWI32G1282 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.3e-08 64.3 184 27.7
Atru.chr1.1796 Acer truncatum HOM05D000593 ORTHO05D000562 1.7e-08 63.9 188 25.0
AUR62039874 Chenopodium quinoa HOM05D012566 ORTHO05D000562 1.7e-08 63.9 69 42.0
Ca_06057_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.7e-08 63.9 157 28.0
Ca_18398_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.7e-08 63.9 157 28.0
Ca_05380_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.3e-08 63.5 157 28.0
FvH4_5g25511 Fragaria vesca HOM05D000593 ORTHO05D000562 2.3e-08 63.5 115 34.8
Ca_26997_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 3.0e-08 63.2 209 25.4
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 3.0e-08 63.2 166 28.3
PSO541G4860 Papaver somniferum HOM05D000593 ORTHO05D000562 3.0e-08 63.2 165 23.6
PSO675G6516 Papaver somniferum HOM05D000593 ORTHO05D000562 3.0e-08 63.2 165 23.6
TPR.G28618 Trifolium pratense HOM05D000593 ORTHO05D000562 3.0e-08 63.2 185 25.4
TWI15G1107 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.0e-08 63.2 184 23.4
TWI32G0292 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.0e-08 63.2 141 32.6
Phvul.002G126900 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 3.9e-08 62.8 162 28.4
TWI12G0648 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 3.9e-08 62.8 158 26.6
Gorai.009G169100 Gossypium raimondii HOM05D000593 ORTHO05D000562 5.1e-08 62.4 197 25.9
PSO541G3362 Papaver somniferum HOM05D000593 ORTHO05D000562 5.1e-08 62.4 169 24.9
TWI09G0669 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.1e-08 62.4 162 27.2
AUR62022257 Chenopodium quinoa HOM05D012566 ORTHO05D000562 6.6e-08 62.0 55 47.3
ECA232G0916 Erigeron canadensis HOM05D000593 ORTHO05D000562 6.6e-08 62.0 105 34.3
TWI38G0080 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.6e-08 62.0 149 24.2
ECA233G2080 Erigeron canadensis HOM05D000228 ORTHO05D001545 8.6e-08 61.6 105 34.3
TWI75G0671 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 8.6e-08 61.6 184 22.8
FvH4_4g16652 Fragaria vesca HOM05D000593 ORTHO05D000562 1.1e-07 61.2 184 26.6
Hma1.2p1_0638F.1_g193680 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.1e-07 61.2 177 29.4
Mapoly0014s0010 Marchantia polymorpha HOM05D000593 ORTHO05D000562 1.9e-07 60.5 73 39.7
Mapoly0014s0016 Marchantia polymorpha HOM05D000593 ORTHO05D000562 1.9e-07 60.5 73 39.7
RhsimUnG0244500 Rhododendron simsii HOM05D000593 ORTHO05D000562 1.9e-07 60.5 145 29.0
Ca_02694_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.5e-07 60.1 164 26.2
TWI15G0719 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.5e-07 60.1 143 24.5
Gorai.007G053200 Gossypium raimondii HOM05D000593 ORTHO05D000562 3.3e-07 59.7 195 24.6
GSVIVG01023955001 Vitis vinifera HOM05D000593 ORTHO05D000562 3.3e-07 59.7 186 23.7
PSO782G5710 Papaver somniferum HOM05D000593 ORTHO05D000562 4.3e-07 59.3 159 25.8
TWI53G0239 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 4.3e-07 59.3 146 24.0
HanXRQChr11g0331001 Helianthus annuus HOM05D000593 ORTHO05D000562 5.6e-07 58.9 141 30.5
Mapoly0005s0183 Marchantia polymorpha HOM05D000593 ORTHO05D000562 5.6e-07 58.9 61 45.9
Gorai.005G173000 Gossypium raimondii HOM05D000593 ORTHO05D000562 9.6e-07 58.2 169 25.4
Medtr5g018790 Medicago truncatula HOM05D003216 ORTHO05D002268 9.6e-07 58.2 162 25.9
HanXRQChr17g0552941 Helianthus annuus HOM05D000593 ORTHO05D000562 1.2e-06 57.8 195 25.6
Mapoly0007s0022 Marchantia polymorpha HOM05D000593 ORTHO05D000562 1.2e-06 57.8 71 38.0
TWI36G0901 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.2e-06 57.8 179 22.9
Pp3c23_16940 Physcomitrium patens HOM05D000593 ORTHO05D000562 2.8e-06 56.6 216 23.1
HanXRQChr13g0412791 Helianthus annuus HOM05D000593 ORTHO05D000562 3.6e-06 56.2 163 26.4
HanXRQChr14g0460171 Helianthus annuus HOM05D000021 ORTHO05D000562 3.6e-06 56.2 195 27.2
Migut.D01883 Erythranthe guttata HOM05D000593 ORTHO05D000562 4.7e-06 55.8 159 23.3
HanXRQChr08g0232231 Helianthus annuus HOM05D000593 ORTHO05D000562 4.7e-06 55.8 163 26.4
HanXRQChr15g0467831 Helianthus annuus HOM05D000593 ORTHO05D000562 4.7e-06 55.8 163 26.4
TPR.G20851 Trifolium pratense HOM05D000593 ORTHO05D000562 4.7e-06 55.8 126 27.0
PSO765G0022 Papaver somniferum HOM05D000593 ORTHO05D000562 8.1e-06 55.1 151 27.2


User provided reference genes

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