Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 1.6e-28 128.6 63 100.0
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 1.6e-28 128.6 63 100.0
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 5.9e-10 67.0 53 54.7
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 7.7e-10 66.6 56 55.4
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 1.0e-09 66.2 56 53.6
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 1.7e-09 65.5 53 52.8
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 1.7e-09 65.5 53 52.8
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 1.7e-09 65.5 53 52.8
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 3.8e-09 64.3 52 53.8
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 3.8e-09 64.3 56 51.8
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 5.0e-09 63.9 66 47.0
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 6.5e-09 63.5 52 51.9
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 6.5e-09 63.5 53 52.8
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 6.5e-09 63.5 53 52.8
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 6.5e-09 63.5 57 50.9
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 6.5e-09 63.5 52 51.9
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 6.5e-09 63.5 53 52.8
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 6.5e-09 63.5 59 50.8
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 8.5e-09 63.2 59 47.5
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 8.5e-09 63.2 53 50.9
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 8.5e-09 63.2 53 50.9
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 8.5e-09 63.2 53 50.9
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 8.5e-09 63.2 53 50.9
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 8.5e-09 63.2 53 50.9
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 8.5e-09 63.2 53 50.9
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 8.5e-09 63.2 53 50.9
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 8.5e-09 63.2 53 50.9
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 8.5e-09 63.2 53 50.9
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 8.5e-09 63.2 53 50.9
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 8.5e-09 63.2 53 50.9
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 8.5e-09 63.2 53 50.9
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 8.5e-09 63.2 59 50.8
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 8.5e-09 63.2 53 50.9
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 8.5e-09 63.2 58 51.7
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 8.5e-09 63.2 57 49.1
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 8.5e-09 63.2 57 49.1
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 8.5e-09 63.2 53 50.9
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 1.1e-08 62.8 59 50.8
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 1.1e-08 62.8 53 50.9
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 1.1e-08 62.8 53 50.9
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 1.4e-08 62.4 52 51.9
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 1.4e-08 62.4 53 50.9
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.4e-08 62.4 53 50.9
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 1.4e-08 62.4 53 49.1
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 1.4e-08 62.4 56 51.8
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 1.9e-08 62.0 53 50.9
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 1.9e-08 62.0 59 49.2
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 1.9e-08 62.0 58 50.0
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 1.9e-08 62.0 57 49.1
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.9e-08 62.0 63 47.6
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.9e-08 62.0 63 47.6
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.9e-08 62.0 63 47.6
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.9e-08 62.0 63 47.6
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.9e-08 62.0 63 47.6
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.9e-08 62.0 63 47.6
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 1.9e-08 62.0 53 50.9
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 2.5e-08 61.6 53 47.2
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 2.5e-08 61.6 58 48.3
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 2.5e-08 61.6 56 50.0
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 2.5e-08 61.6 52 51.9
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 2.5e-08 61.6 65 46.2
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 2.5e-08 61.6 53 50.9
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 3.2e-08 61.2 60 48.3
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 3.2e-08 61.2 60 48.3
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 3.2e-08 61.2 53 49.1
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 3.2e-08 61.2 52 51.9
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 3.2e-08 61.2 52 51.9
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 3.2e-08 61.2 56 50.0
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 3.2e-08 61.2 63 46.0
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 4.2e-08 60.8 52 48.1
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 4.2e-08 60.8 57 47.4
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 4.2e-08 60.8 56 50.0
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 5.5e-08 60.5 52 48.1
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 5.5e-08 60.5 58 48.3
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 5.5e-08 60.5 52 50.0
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 7.2e-08 60.1 50 50.0
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 7.2e-08 60.1 56 46.4
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 9.4e-08 59.7 58 48.3
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 9.4e-08 59.7 52 48.1
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 9.4e-08 59.7 52 48.1
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 1.2e-07 59.3 58 46.6
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.6e-07 58.9 59 47.5
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 1.6e-07 58.9 47 53.2
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 1.6e-07 58.9 64 48.4
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 1.6e-07 58.9 53 47.2
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 2.1e-07 58.5 53 45.3
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 2.1e-07 58.5 56 46.4
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 2.7e-07 58.2 50 48.0
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 3.6e-07 57.8 60 46.7
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 4.6e-07 57.4 53 45.3
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 6.1e-07 57.0 55 49.1
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 6.1e-07 57.0 55 49.1
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 1.4e-06 55.8 58 48.3


User provided reference genes

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