Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_4330 Physcomitrium patens HOM05D006566 ORTHO05D004366 2.3e-157 559.3 384 100.0
Mapoly0207s0010 Marchantia polymorpha HOM05D006566 ORTHO05D004366 2.8e-38 163.7 236 43.6
SEGI_22753 Sequoiadendron giganteum HOM05D006566 ORTHO05D004366 1.3e-35 154.8 192 47.4
AagrBONN_evm.TU.Sc2ySwM_344.1183 Anthoceros agrestis HOM05D006566 ORTHO05D004366 1.8e-29 134.4 172 45.3
ATR0712G004 Amborella trichopoda HOM05D006566 ORTHO05D004366 2.0e-28 131.0 175 44.0
PSO161G0080 Papaver somniferum HOM05D006566 ORTHO05D004366 2.0e-23 114.4 175 42.3
Manes.06G099800 Manihot esculenta HOM05D006566 ORTHO05D004366 3.3e-23 113.6 190 37.9
SMO367G0338 Selaginella moellendorffii HOM05D013869 ORTHO05D015602 4.4e-23 113.2 198 38.4
TAR374G0618 Trochodendron aralioides HOM05D006566 ORTHO05D004366 2.8e-22 110.5 203 37.4
Nn3g17040 Nelumbo nucifera HOM05D006566 ORTHO05D004366 3.7e-22 110.2 180 38.9
MBI16_g07135_MAGBIO Magnolia biondii HOM05D006566 ORTHO05D004366 6.3e-22 109.4 221 35.7
GSVIVG01007834001 Vitis vinifera HOM05D006566 ORTHO05D004366 6.3e-22 109.4 181 38.1
CiPaw.12G022600 Carya illinoinensis HOM05D006566 ORTHO05D004366 8.2e-22 109.0 194 37.1
Zm00001eb156370 Zea mays HOM05D006566 ORTHO05D004366 8.2e-22 109.0 200 40.0
Cfa019059 Carpinus fangiana HOM05D006566 ORTHO05D004366 1.8e-21 107.8 171 38.6
Ah.11g046290 Amaranthus hybridus HOM05D006566 ORTHO05D004366 3.1e-21 107.1 170 40.0
Glyma.17G093800 Glycine max HOM05D006566 ORTHO05D004366 3.1e-21 107.1 200 37.5
QL10p013685 Quercus lobata HOM05D006566 ORTHO05D004366 4.1e-21 106.7 171 38.0
AT3G48120 Arabidopsis thaliana HOM05D006566 ORTHO05D004366 5.3e-21 106.3 208 36.5
Carub.0005s1423 Capsella rubella HOM05D006566 ORTHO05D004366 6.9e-21 105.9 190 38.4
SGA_v2.0_scaffold56G20079 Striga asiatica HOM05D006566 ORTHO05D004366 1.2e-20 105.1 171 39.8
C08p23010 Brassica napus HOM05D006566 ORTHO05D004366 1.5e-20 104.8 193 36.8
Sed0021978 Sechium edule HOM05D006566 ORTHO05D004366 1.5e-20 104.8 199 36.2
Atru.chr9.2391 Acer truncatum HOM05D006566 ORTHO05D004366 2.0e-20 104.4 192 37.5
CANSAT80G0898 Cannabis sativa HOM05D006566 ORTHO05D004366 2.0e-20 104.4 176 36.9
Lj4g0023975 Lotus japonicus HOM05D006566 ORTHO05D004366 2.6e-20 104.0 199 36.7
unitig_749.g13457 Utricularia gibba HOM05D006566 ORTHO05D004366 2.6e-20 104.0 173 37.0
Aa31LG4G16730 Aethionema arabicum HOM05D006566 ORTHO05D004366 3.4e-20 103.6 182 38.5
CARHR156850 Cardamine hirsuta HOM05D006566 ORTHO05D004366 3.4e-20 103.6 197 37.6
AL5G27450 Arabidopsis lyrata HOM05D006566 ORTHO05D004366 4.5e-20 103.2 174 40.8
CsaV3_1G008150 Cucumis sativus L. HOM05D006566 ORTHO05D004366 7.7e-20 102.4 193 36.8
Lalb_Chr07g0182501 Lupinus albus HOM05D006566 ORTHO05D004366 7.7e-20 102.4 195 36.9
Glyma.05G033200 Glycine max HOM05D006566 ORTHO05D004366 1.0e-19 102.1 197 37.6
Hma1.2p1_0572F.1_g181020 Hydrangea macrophylla HOM05D006566 ORTHO05D004366 1.0e-19 102.1 196 35.7
Lsat_1_v5_gn_5_18061 Lactuca sativa HOM05D006566 ORTHO05D004366 1.0e-19 102.1 175 37.1
Medtr4g106550 Medicago truncatula HOM05D006566 ORTHO05D004366 1.0e-19 102.1 203 36.5
Sp5g13910 Schrenkiella parvula HOM05D006566 ORTHO05D004366 1.0e-19 102.1 191 39.8
Aqoxy3G00871 Aquilegia oxysepala HOM05D006566 ORTHO05D004366 1.3e-19 101.7 173 38.7
Eucgr.K02884 Eucalyptus grandis HOM05D006566 ORTHO05D004366 1.7e-19 101.3 170 38.8
Actinidia34964 Actinidia chinensis HOM05D006566 ORTHO05D004366 2.2e-19 100.9 173 37.6
arahy.Tifrunner.gnm1.ann1.1VUR4R Arachis hypogaea HOM05D006566 ORTHO05D004366 2.2e-19 100.9 195 35.9
A06p19570 Brassica napus HOM05D006566 ORTHO05D004366 2.2e-19 100.9 170 38.2
ECA246G4585 Erigeron canadensis HOM05D006566 ORTHO05D004366 2.2e-19 100.9 200 36.0
Solyc12g027740.3 Solanum lycopersicum HOM05D006566 ORTHO05D004366 2.2e-19 100.9 196 37.8
BcaC07g39294 Brassica carinata HOM05D006566 ORTHO05D004366 2.9e-19 100.5 170 37.6
BolC8t49939H Brassica oleracea HOM05D006566 ORTHO05D004366 2.9e-19 100.5 170 37.6
Thhalv10010547m.g Eutrema salsugineum HOM05D006566 ORTHO05D004366 2.9e-19 100.5 191 35.6
arahy.Tifrunner.gnm1.ann1.0W0WAG Arachis hypogaea HOM05D006566 ORTHO05D004366 3.8e-19 100.1 194 36.1
Os01g0687600 Oryza sativa ssp. japonica HOM05D006566 ORTHO05D004366 3.8e-19 100.1 212 37.7
MSTRG.23070 Avicennia marina HOM05D006566 ORTHO05D004366 5.0e-19 99.8 188 37.8
Cpa.g.sc35.28 Carica papaya HOM05D006566 ORTHO05D004366 5.0e-19 99.8 188 36.2
Ca_21878_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 5.0e-19 99.8 194 35.6
Ca_21886_v3 Cicer arietinum L. HOM05D006566 ORTHO05D004366 5.0e-19 99.8 194 35.6
Sopen12g012820 Solanum pennellii HOM05D006566 ORTHO05D004366 5.0e-19 99.8 196 37.2
TPR.G38369 Trifolium pratense HOM05D006566 ORTHO05D004366 5.0e-19 99.8 192 38.0
BcaB01g00844 Brassica carinata HOM05D006566 ORTHO05D004366 6.5e-19 99.4 170 37.6
VMungo1215G1614 Vigna mungo HOM05D006566 ORTHO05D004366 6.5e-19 99.4 198 36.4
Psat4g055720 Pisum sativum HOM05D006566 ORTHO05D004366 8.5e-19 99.0 200 36.0
Cc04_g16230 Coffea canephora HOM05D006566 ORTHO05D004366 1.1e-18 98.6 204 32.8
Nitab4.5_0000026g0410 Nicotiana tabacum HOM05D006566 ORTHO05D004366 1.1e-18 98.6 164 40.2
Thecc.03G002700 Theobroma cacao HOM05D006566 ORTHO05D004366 1.1e-18 98.6 184 38.0
EL10Ac5g10849 Beta vulgaris HOM05D006566 ORTHO05D004366 1.4e-18 98.2 140 44.3
Migut.I00099 Erythranthe guttata HOM05D006566 ORTHO05D004366 2.5e-18 97.4 186 34.9
FvH4_5g16290 Fragaria vesca HOM05D006566 ORTHO05D004366 3.2e-18 97.1 192 35.4
FAN18G1223 Fragaria x ananassa HOM05D006566 ORTHO05D004366 3.2e-18 97.1 192 35.4
PGR044G1407 Punica granatum HOM05D006566 ORTHO05D004366 3.2e-18 97.1 196 35.2
THA.LOC104821469 Tarenaya hassleriana HOM05D006566 ORTHO05D004366 3.2e-18 97.1 176 38.1
AUR62008294 Chenopodium quinoa HOM05D006566 ORTHO05D004366 4.2e-18 96.7 133 40.6
MD06G1182300 Malus domestica HOM05D006566 ORTHO05D004366 4.2e-18 96.7 203 36.5
Potri.015G070100 Populus trichocarpa HOM05D006566 ORTHO05D004366 4.2e-18 96.7 196 35.2
Actinidia19077 Actinidia chinensis HOM05D006566 ORTHO05D004366 5.5e-18 96.3 210 36.7
CAN.G1932.4 Capsicum annuum HOM05D006566 ORTHO05D004366 5.5e-18 96.3 185 36.2
MD14G1188300 Malus domestica HOM05D006566 ORTHO05D004366 7.2e-18 95.9 169 37.3
CDE06G0758 Ceratophyllum demersum HOM05D006566 ORTHO05D004366 9.4e-18 95.5 107 48.6
FAN04G3214 Fragaria x ananassa HOM05D006566 ORTHO05D004366 9.4e-18 95.5 188 35.1
Nitab4.5_0003577g0010 Nicotiana tabacum HOM05D006566 ORTHO05D004366 9.4e-18 95.5 176 36.4
HanXRQChr14g0438811 Helianthus annuus HOM05D006566 ORTHO05D004366 1.2e-17 95.1 193 34.2
COL.COLO4_21450 Corchorus olitorius HOM05D006566 ORTHO05D004366 1.6e-17 94.7 207 36.2
Gohir.D08G106700 Gossypium hirsutum HOM05D006566 ORTHO05D004366 2.1e-17 94.4 199 36.7
vmacro16583 Vaccinium macrocarpon HOM05D006566 ORTHO05D004366 2.1e-17 94.4 186 35.5
Phvul.003G196400 Phaseolus vulgaris HOM05D006566 ORTHO05D004366 3.6e-17 93.6 197 35.5
Sabra15G0094200 Salix brachista HOM05D006566 ORTHO05D004366 3.6e-17 93.6 185 35.7
AUR62031056 Chenopodium quinoa HOM05D006566 ORTHO05D004366 4.7e-17 93.2 107 44.9
Gorai.004G113800 Gossypium raimondii HOM05D006566 ORTHO05D004366 7.9e-17 92.4 205 35.6
FAN13G1045 Fragaria x ananassa HOM05D006566 ORTHO05D004366 1.0e-16 92.0 189 34.9
Prupe.5G180400 Prunus persica HOM05D006566 ORTHO05D004366 1.0e-16 92.0 190 33.2
BraA06t25037Z Brassica rapa HOM05D006566 ORTHO05D004366 1.8e-16 91.3 107 47.7
FAN08G1664 Fragaria x ananassa HOM05D006566 ORTHO05D004366 2.3e-16 90.9 189 33.9
CSS0042495 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 3.9e-16 90.1 197 34.0
CSS0033214 Camellia sinensis var. sinensis HOM05D006566 ORTHO05D004366 8.8e-16 89.0 204 33.3
RcHm_v2.0_Chr7g0179841 Rosa chinensis HOM05D006566 ORTHO05D004366 1.1e-15 88.6 191 33.5
BcaC07g39293 Brassica carinata HOM05D006566 ORTHO05D004366 1.5e-15 88.2 163 38.0
ClCG01G014160 Citrullus lanatus HOM05D006566 ORTHO05D004366 6.3e-14 82.8 197 34.5
Rhsim12G0161000 Rhododendron simsii HOM05D006566 ORTHO05D004366 4.1e-13 80.1 157 36.9
Sabra15G0095700 Salix brachista HOM05D006566 ORTHO05D004366 4.1e-13 80.1 166 33.7
Sabra15G0094500 Salix brachista HOM05D006566 ORTHO05D004366 2.0e-12 77.8 173 32.4
Sc04g0002180 Simmondsia chinensis HOM05D006566 ORTHO05D004366 1.0e-11 75.5 82 52.4
Haze_07429 Corylus avellana HOM05D006566 ORTHO05D004366 2.9e-11 73.9 176 31.8
MELO3C002232.2 Cucumis melo HOM05D006566 ORTHO05D004366 6.5e-11 72.8 187 31.0
Dinv13130 Davidia involucrata HOM05D006566 ORTHO05D004366 6.5e-11 72.8 89 49.4
HPP92_021882 Vanilla planifolia HOM05D006566 ORTHO05D004366 6.5e-11 72.8 109 43.1
DCAR_026101 Daucus carota HOM05D006566 ORTHO05D004366 1.0e-08 65.5 139 31.7
Hund02706 Selenicereus undatus HOM05D006566 ORTHO05D004366 1.4e-08 65.1 216 28.7
CBR_g6719 Chara braunii HOM05D006566 ORTHO05D004366 3.0e-08 63.9 177 35.6
Gohir.A08G095200 Gossypium hirsutum HOM05D006566 ORTHO05D004366 4.0e-08 63.5 79 46.8
Oeu005686.3 Olea europaea HOM05D006566 ORTHO05D004366 1.2e-07 62.0 170 30.6


User provided reference genes

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