Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 4.4e-167 591.3 309 100.0
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 1.5e-58 230.7 210 62.4
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 2.4e-56 223.4 200 60.0
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 7.0e-56 221.9 203 57.1
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 9.1e-56 221.5 225 56.4
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 1.3e-54 217.6 219 55.3
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 3.8e-54 216.1 219 54.3
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 3.8e-54 216.1 220 56.4
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 3.8e-54 216.1 220 55.9
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 5.0e-54 215.7 213 54.0
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 6.5e-54 215.3 219 54.3
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 8.5e-54 214.9 219 51.6
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 8.5e-54 214.9 220 53.2
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 1.5e-53 214.2 219 51.6
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 1.9e-53 213.8 219 54.8
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 7.2e-53 211.8 224 51.3
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 7.2e-53 211.8 227 52.4
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 7.2e-53 211.8 219 52.5
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 9.4e-53 211.5 222 54.1
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 9.4e-53 211.5 221 53.8
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 9.4e-53 211.5 219 53.0
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 9.4e-53 211.5 209 55.0
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 1.2e-52 211.1 219 54.8
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 1.6e-52 210.7 219 54.8
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 1.6e-52 210.7 197 57.4
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 2.7e-52 209.9 244 51.6
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 2.7e-52 209.9 220 53.6
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 2.7e-52 209.9 219 53.9
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 6.1e-52 208.8 219 52.5
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 6.1e-52 208.8 219 53.9
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 1.8e-51 207.2 219 53.0
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 2.3e-51 206.8 194 56.2
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 4.0e-51 206.1 220 52.7
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 8.8e-51 204.9 196 56.6
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 8.8e-51 204.9 192 56.2
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 8.8e-51 204.9 219 50.2
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 8.8e-51 204.9 202 55.9
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 1.2e-50 204.5 184 58.7
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 2.0e-50 203.8 229 51.1
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 2.0e-50 203.8 219 51.6
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 3.4e-50 203.0 203 54.2
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 3.4e-50 203.0 219 51.6
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 4.4e-50 202.6 219 51.6
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 4.4e-50 202.6 219 52.1
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 5.7e-50 202.2 205 53.2
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 7.5e-50 201.8 202 51.0
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 1.3e-49 201.1 219 50.2
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 1.3e-49 201.1 229 49.8
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 2.2e-49 200.3 219 50.7
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 2.2e-49 200.3 235 49.8
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 2.8e-49 199.9 203 52.7
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 2.8e-49 199.9 218 52.3
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 2.8e-49 199.9 205 52.2
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 3.7e-49 199.5 205 51.7
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 4.9e-49 199.1 212 54.2
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 8.3e-49 198.4 228 52.2
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 8.3e-49 198.4 224 50.4
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 1.1e-48 198.0 231 52.4
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 1.4e-48 197.6 226 50.9
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 1.8e-48 197.2 219 50.2
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 4.1e-48 196.1 222 51.8
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 7.0e-48 195.3 227 49.8
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 7.0e-48 195.3 225 51.6
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 2.0e-47 193.7 196 55.1
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 2.7e-47 193.4 219 51.6
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 2.7e-47 193.4 224 51.8
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 2.7e-47 193.4 172 55.2
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 4.5e-47 192.6 223 52.0
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 5.9e-47 192.2 218 50.5
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 1.3e-46 191.0 218 50.5
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 1.3e-46 191.0 166 56.6
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 1.3e-46 191.0 242 45.9
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 1.7e-46 190.7 218 49.5
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 2.9e-46 189.9 166 56.0
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 3.8e-46 189.5 220 48.6
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 5.0e-46 189.1 218 51.8
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 6.6e-46 188.7 223 51.1
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 1.5e-45 187.6 195 51.3
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 5.6e-45 185.7 167 55.7
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 1.0e-43 181.4 166 53.6
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 1.8e-43 180.6 219 50.2
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 5.2e-43 179.1 154 57.1
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 4.4e-42 176.0 166 53.0
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 2.4e-40 170.2 190 48.9
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 1.3e-38 164.5 133 65.4
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 8.0e-36 155.2 141 51.8
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 1.0e-35 154.8 221 45.7
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 1.8e-35 154.1 138 53.6
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 7.5e-34 148.7 161 55.3
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 1.8e-27 127.5 136 47.8
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 4.4e-26 122.9 147 54.4
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 5.8e-26 122.5 147 53.7
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 2.2e-25 120.6 219 39.3
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 4.0e-19 99.8 226 37.2
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 5.2e-19 99.4 80 65.0
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 5.2e-19 99.4 80 65.0
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 4.1e-16 89.7 76 52.6
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 9.2e-16 88.6 94 52.1
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 9.6e-13 78.6 157 36.9
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 2.1e-12 77.4 62 66.1
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 1.1e-11 75.1 59 61.0
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 2.3e-06 57.4 215 32.1


User provided reference genes

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