Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 4.1e-179 631.3 331 100.0
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 1.4e-46 191.0 230 45.2
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 8.9e-41 171.8 198 47.5
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 6.4e-39 165.6 199 46.7
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 4.1e-38 162.9 225 41.3
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 9.2e-38 161.8 211 43.1
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 9.2e-38 161.8 230 40.9
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 1.2e-37 161.4 223 39.9
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 3.5e-37 159.8 224 40.2
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 1.0e-36 158.3 201 43.3
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 1.0e-36 158.3 208 41.3
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 1.7e-36 157.5 227 40.1
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 6.6e-36 155.6 220 39.1
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 6.6e-36 155.6 210 41.9
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 1.5e-35 154.5 212 41.0
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 1.5e-35 154.5 205 41.0
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 1.5e-35 154.5 207 41.5
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 1.9e-35 154.1 194 43.8
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 2.5e-35 153.7 219 39.3
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 2.5e-35 153.7 196 42.9
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 4.3e-35 152.9 213 39.9
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 4.3e-35 152.9 219 38.8
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 4.3e-35 152.9 196 42.9
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 4.3e-35 152.9 202 42.6
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 7.3e-35 152.1 237 37.6
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 7.3e-35 152.1 213 39.9
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 7.3e-35 152.1 207 41.5
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 7.3e-35 152.1 196 41.3
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 9.5e-35 151.8 213 39.9
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 9.5e-35 151.8 198 42.9
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 1.2e-34 151.4 213 40.4
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 1.2e-34 151.4 213 39.9
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 1.6e-34 151.0 196 39.8
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 1.6e-34 151.0 238 37.4
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 1.6e-34 151.0 196 41.8
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 2.1e-34 150.6 196 40.3
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 2.1e-34 150.6 253 36.8
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 2.1e-34 150.6 214 39.3
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 2.1e-34 150.6 196 42.9
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 2.8e-34 150.2 214 40.7
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 2.8e-34 150.2 214 40.7
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 2.8e-34 150.2 196 41.8
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 2.8e-34 150.2 196 40.3
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 2.8e-34 150.2 231 38.5
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 3.6e-34 149.8 195 42.6
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 3.6e-34 149.8 240 40.8
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 3.6e-34 149.8 213 42.3
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 3.6e-34 149.8 214 40.7
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 3.6e-34 149.8 223 37.7
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 3.6e-34 149.8 196 43.4
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 4.7e-34 149.4 214 40.7
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 4.7e-34 149.4 198 42.9
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 4.7e-34 149.4 237 37.6
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 4.7e-34 149.4 203 41.4
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 6.2e-34 149.1 196 40.8
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 8.1e-34 148.7 201 42.3
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 8.1e-34 148.7 196 42.3
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 1.1e-33 148.3 247 36.4
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 1.4e-33 147.9 198 42.9
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 1.8e-33 147.5 204 39.7
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 1.8e-33 147.5 196 40.8
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 1.8e-33 147.5 196 41.3
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 2.3e-33 147.1 196 41.8
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 3.1e-33 146.7 215 38.6
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 5.2e-33 146.0 199 42.2
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 6.8e-33 145.6 196 41.3
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 1.2e-32 144.8 222 39.2
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.2e-32 144.8 195 41.0
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 1.2e-32 144.8 197 41.1
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 1.5e-32 144.4 228 39.0
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 2.0e-32 144.1 204 39.2
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.0e-32 144.1 197 40.6
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 2.6e-32 143.7 251 36.7
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 3.4e-32 143.3 199 41.2
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 4.4e-32 142.9 196 39.8
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 5.8e-32 142.5 196 39.8
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 9.8e-32 141.7 296 34.8
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.7e-31 141.0 200 39.5
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 2.2e-31 140.6 196 39.3
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 2.9e-31 140.2 242 37.6
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 4.9e-31 139.4 196 37.8
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.4e-30 137.9 200 39.0
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.4e-30 137.9 251 35.9
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 2.4e-30 137.1 220 38.6
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 6.0e-29 132.5 196 38.8
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 6.6e-28 129.0 177 39.5
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 1.5e-27 127.9 200 37.5
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 2.5e-27 127.1 200 37.5
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 7.3e-27 125.6 198 36.9
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 9.5e-27 125.2 198 36.9
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 1.6e-26 124.4 188 37.2
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 6.2e-26 122.5 201 37.3
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 1.4e-25 121.3 237 35.0
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 5.2e-25 119.4 176 39.8
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 1.2e-24 118.2 184 39.7
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 2.0e-24 117.5 215 35.3
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 2.9e-23 113.6 255 31.4
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 5.1e-20 102.8 119 43.7
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 5.1e-20 102.8 170 37.6
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 3.6e-18 96.7 137 42.3
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 3.4e-16 90.1 89 57.3
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 3.8e-15 86.7 138 39.1
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 7.1e-14 82.4 207 28.5
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 3.5e-13 80.1 86 40.7
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 3.5e-13 80.1 77 45.5
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 5.1e-12 76.3 90 42.2
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 3.3e-11 73.6 109 41.3
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 5.8e-08 62.8 132 33.3
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 9.9e-08 62.0 67 44.8
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 1.1e-06 58.5 84 42.9


User provided reference genes

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