Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 1.8e-159 565.8 283 100.0
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 1.6e-27 127.5 270 32.6
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 5.3e-26 122.5 251 33.5
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 1.5e-25 120.9 263 31.2
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 6.5e-24 115.5 265 32.5
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 1.1e-23 114.8 252 32.9
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 7.1e-23 112.1 262 32.1
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 1.6e-22 110.9 251 29.5
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 2.1e-22 110.5 250 32.0
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 3.5e-22 109.8 250 30.4
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 3.5e-22 109.8 254 30.7
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 4.6e-22 109.4 251 32.3
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 6.0e-22 109.0 252 29.8
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 7.9e-22 108.6 272 29.4
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 1.0e-21 108.2 253 31.6
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 1.8e-21 107.5 250 30.8
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 1.8e-21 107.5 250 32.0
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 3.9e-21 106.3 252 30.6
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 5.1e-21 105.9 250 30.4
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 6.7e-21 105.5 260 30.4
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 6.7e-21 105.5 251 29.9
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 6.7e-21 105.5 250 30.8
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 8.7e-21 105.1 252 31.3
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 1.1e-20 104.8 250 30.4
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 1.5e-20 104.4 250 28.8
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 2.5e-20 103.6 251 30.7
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 2.5e-20 103.6 252 31.0
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 3.3e-20 103.2 259 31.3
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 3.3e-20 103.2 254 29.9
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 3.3e-20 103.2 250 29.6
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 4.3e-20 102.8 252 30.6
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 4.3e-20 102.8 251 28.3
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 5.7e-20 102.4 250 28.0
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 5.7e-20 102.4 260 28.5
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 5.7e-20 102.4 262 29.8
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 9.7e-20 101.7 251 29.9
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 9.7e-20 101.7 251 30.3
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 9.7e-20 101.7 250 27.6
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 9.7e-20 101.7 253 29.2
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 1.6e-19 100.9 254 30.3
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 1.6e-19 100.9 251 31.1
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 2.2e-19 100.5 250 26.8
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 2.8e-19 100.1 251 29.5
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 2.8e-19 100.1 252 30.2
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 2.8e-19 100.1 254 28.0
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 3.7e-19 99.8 261 29.9
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 4.8e-19 99.4 250 31.2
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 8.2e-19 98.6 251 30.3
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 8.2e-19 98.6 251 29.1
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 1.1e-18 98.2 251 28.3
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 1.4e-18 97.8 273 27.1
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 1.8e-18 97.4 248 29.0
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 1.8e-18 97.4 268 27.6
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 1.8e-18 97.4 244 28.3
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 2.4e-18 97.1 250 28.0
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 3.1e-18 96.7 251 29.9
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 3.1e-18 96.7 275 29.5
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 5.3e-18 95.9 260 30.4
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 6.9e-18 95.5 234 27.8
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 6.9e-18 95.5 258 28.3
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 6.9e-18 95.5 260 27.7
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 9.0e-18 95.1 268 28.0
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 1.2e-17 94.7 250 27.2
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 1.5e-17 94.4 272 26.8
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 1.5e-17 94.4 272 26.8
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 2.0e-17 94.0 272 27.2
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 2.0e-17 94.0 277 27.1
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 2.6e-17 93.6 255 27.1
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 3.4e-17 93.2 276 28.6
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 1.0e-16 91.7 254 26.8
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 1.3e-16 91.3 238 26.9
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 1.3e-16 91.3 250 27.6
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 5.0e-16 89.4 251 28.3
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 6.5e-16 89.0 250 27.6
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 8.5e-16 88.6 261 26.8
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 8.5e-16 88.6 250 26.4
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 8.5e-16 88.6 250 27.2
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.1e-15 88.2 239 28.0
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 5.5e-15 85.9 259 26.6
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 5.5e-15 85.9 249 27.7
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.2e-14 84.7 252 26.2
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.1e-14 84.0 251 26.7
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 2.7e-14 83.6 251 25.1
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 2.7e-14 83.6 251 23.9
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 3.6e-14 83.2 250 24.4
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.0e-13 81.6 239 27.2
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.3e-13 80.5 250 24.8
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 1.7e-11 74.3 345 22.9
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 8.2e-11 72.0 252 28.2
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 1.8e-10 70.9 73 52.1
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.4e-10 70.5 277 25.3
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 2.4e-10 70.5 56 55.4
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 3.1e-10 70.1 101 35.6
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 4.1e-10 69.7 110 35.5
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 6.9e-10 68.9 57 54.4
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 9.1e-10 68.6 215 26.0
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 9.1e-10 68.6 87 40.2
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 2.0e-09 67.4 52 61.5
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 1.0e-08 65.1 56 50.0
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 1.0e-08 65.1 61 49.2
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 1.3e-08 64.7 123 33.3
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 1.1e-07 61.6 222 25.2
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 3.6e-06 56.6 119 31.1
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 6.1e-06 55.8 137 28.5


User provided reference genes

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