Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_22770 Physcomitrium patens HOM05D003201 ORTHO05D008914 1.2e-160 569.7 276 100.0
Mapoly0037s0034 Marchantia polymorpha HOM05D003201 ORTHO05D008914 2.3e-66 256.5 273 46.9
SEGI_35572 Sequoiadendron giganteum HOM05D003201 ORTHO05D008914 1.1e-57 227.6 278 41.0
ATR0686G110 Amborella trichopoda HOM05D003201 ORTHO05D008914 2.0e-54 216.9 241 44.4
CSS0050223 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 4.9e-53 212.2 272 39.0
CSS0009288 Camellia sinensis var. sinensis HOM05D003201 ORTHO05D008914 8.4e-53 211.5 272 39.0
Ciclev10016172m.g Citrus clementina HOM05D003201 ORTHO05D008914 1.1e-52 211.1 257 40.9
PGR042G2091 Punica granatum HOM05D003201 ORTHO05D008914 1.4e-52 210.7 214 44.4
AagrBONN_evm.TU.Sc2ySwM_344.2003 Anthoceros agrestis HOM05D003201 ORTHO05D008914 1.9e-52 210.3 228 47.4
AUR62028026 Chenopodium quinoa HOM05D003201 ORTHO05D008914 9.3e-52 208.0 213 44.6
Manes.02G219100 Manihot esculenta HOM05D003201 ORTHO05D008914 1.6e-51 207.2 271 41.0
QL12p025722 Quercus lobata HOM05D003201 ORTHO05D008914 6.0e-51 205.3 270 41.1
THA.LOC104811993 Tarenaya hassleriana HOM05D003201 ORTHO05D008914 6.0e-51 205.3 238 42.0
Hund03239 Selenicereus undatus HOM05D003201 ORTHO05D008914 1.0e-50 204.5 275 39.6
DCAR_002183 Daucus carota HOM05D003201 ORTHO05D008914 5.1e-50 202.2 267 39.7
MD15G1105100 Malus domestica HOM05D003201 ORTHO05D008914 6.7e-50 201.8 255 40.8
SalBow8G4280 Salvia bowleyana HOM05D003201 ORTHO05D008914 6.7e-50 201.8 269 38.3
Aa31LG6G2740 Aethionema arabicum HOM05D003201 ORTHO05D008914 8.7e-50 201.4 266 38.7
CiPaw.07G210300 Carya illinoinensis HOM05D003201 ORTHO05D008914 1.1e-49 201.1 270 38.9
A03p52400 Brassica napus HOM05D000936 ORTHO05D008914 1.9e-49 200.3 272 39.3
CANSAT54G1971 Cannabis sativa HOM05D003201 ORTHO05D008914 1.9e-49 200.3 269 39.0
Actinidia29333 Actinidia chinensis HOM05D003201 ORTHO05D008914 2.5e-49 199.9 243 39.1
Aqoxy7G00979 Aquilegia oxysepala HOM05D003201 ORTHO05D008914 3.3e-49 199.5 250 38.4
ECA233G2337 Erigeron canadensis HOM05D004148 ORTHO05D004709 3.3e-49 199.5 262 38.9
CARHR227150 Cardamine hirsuta HOM05D003201 ORTHO05D008914 4.3e-49 199.1 244 40.6
PGSC0003DMG402028340 Solanum tuberosum HOM05D003201 ORTHO05D008914 5.7e-49 198.7 258 38.8
CsaV3_2G031270 Cucumis sativus L. HOM05D003201 ORTHO05D008914 1.3e-48 197.6 249 39.8
Potri.006G280600 Populus trichocarpa HOM05D003201 ORTHO05D008914 2.8e-48 196.4 277 37.5
SMO115G0061 Selaginella moellendorffii HOM05D003201 ORTHO05D008914 2.8e-48 196.4 240 40.4
Sopen05g007740 Solanum pennellii HOM05D003201 ORTHO05D008914 2.8e-48 196.4 253 37.9
GSVIVG01035604001 Vitis vinifera HOM05D003201 ORTHO05D008914 2.8e-48 196.4 269 39.0
AL7G33570 Arabidopsis lyrata HOM05D003201 ORTHO05D008914 3.7e-48 196.1 241 40.7
EL10Ac8g19259 Beta vulgaris HOM05D003201 ORTHO05D008914 3.7e-48 196.1 264 36.4
Cpa.g.sc30.52 Carica papaya HOM05D003201 ORTHO05D008914 3.7e-48 196.1 270 38.9
Duzib084G1420 Durio zibethinus HOM05D003201 ORTHO05D008914 4.8e-48 195.7 274 38.0
Gohir.D12G205000 Gossypium hirsutum HOM05D003201 ORTHO05D008914 4.8e-48 195.7 273 39.6
Gohir.A12G202300 Gossypium hirsutum HOM05D003201 ORTHO05D008914 6.3e-48 195.3 273 39.6
Nitab4.5_0012553g0020 Nicotiana tabacum HOM05D003201 ORTHO05D008914 6.3e-48 195.3 209 41.6
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 8.2e-48 194.9 244 40.2
Dinv37468 Davidia involucrata HOM05D003201 ORTHO05D008914 1.1e-47 194.5 198 42.4
Gorai.008G219900 Gossypium raimondii HOM05D003201 ORTHO05D008914 1.1e-47 194.5 253 39.5
Nitab4.5_0000391g0210 Nicotiana tabacum HOM05D003201 ORTHO05D008914 1.1e-47 194.5 254 37.4
Solyc05g012940.4 Solanum lycopersicum HOM05D003201 ORTHO05D008914 1.1e-47 194.5 253 37.5
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 1.4e-47 194.1 244 40.2
BraA03t14319Z Brassica rapa HOM05D003201 ORTHO05D008914 1.4e-47 194.1 237 40.1
CAN.G964.23 Capsicum annuum HOM05D003201 ORTHO05D008914 1.8e-47 193.7 255 37.6
Lsat_1_v5_gn_5_73181 Lactuca sativa HOM05D003201 ORTHO05D008914 1.8e-47 193.7 256 36.7
BolC7t45584H Brassica oleracea HOM05D000936 ORTHO05D008914 2.4e-47 193.4 244 39.3
BcaNung03501 Brassica carinata HOM05D003201 ORTHO05D008914 3.1e-47 193.0 244 38.9
C07p50860 Brassica napus HOM05D000936 ORTHO05D008914 3.1e-47 193.0 244 38.9
PSO782G1293 Papaver somniferum HOM05D003201 ORTHO05D008914 5.3e-47 192.2 258 39.1
MELO3C011176.2 Cucumis melo HOM05D003201 ORTHO05D008914 6.9e-47 191.8 271 39.1
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 9.0e-47 191.4 270 37.4
SGA_v2.0_scaffold45G16974 Striga asiatica HOM05D003201 ORTHO05D008914 1.5e-46 190.7 248 39.1
Atru.BG.264.p Acer truncatum HOM05D003201 ORTHO05D008914 2.6e-46 189.9 193 43.5
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 2.6e-46 189.9 244 38.9
Eucgr.E04307 Eucalyptus grandis HOM05D003201 ORTHO05D008914 3.4e-46 189.5 194 42.8
Peaxi162Scf00314g00636 Petunia axillaris HOM05D003201 ORTHO05D008914 4.5e-46 189.1 259 38.2
AT4G20325 Arabidopsis thaliana HOM05D003201 ORTHO05D008914 7.7e-46 188.3 241 39.0
HanXRQChr15g0468831 Helianthus annuus HOM05D003201 ORTHO05D008914 7.7e-46 188.3 265 37.4
ClCG08G012570 Citrullus lanatus HOM05D003201 ORTHO05D008914 1.3e-45 187.6 248 39.5
BcaC06g30651 Brassica carinata HOM05D003201 ORTHO05D008914 2.2e-45 186.8 244 39.8
Carub.0007s2085 Capsella rubella HOM05D003201 ORTHO05D008914 5.0e-45 185.7 241 39.8
Cc11_g12550 Coffea canephora HOM05D003201 ORTHO05D008914 1.1e-44 184.5 264 36.7
Migut.E00069 Erythranthe guttata HOM05D003201 ORTHO05D008914 1.9e-44 183.7 260 37.7
Lj1g0010900 Lotus japonicus HOM05D003201 ORTHO05D008914 2.5e-44 183.3 249 38.2
Thhalv10025951m.g Eutrema salsugineum HOM05D003201 ORTHO05D008914 3.2e-44 183.0 251 39.0
FvH4_2g36540 Fragaria vesca HOM05D003201 ORTHO05D008914 3.2e-44 183.0 195 42.6
RcHm_v2.0_Chr6g0305311 Rosa chinensis HOM05D003201 ORTHO05D008914 7.2e-44 181.8 255 37.6
Prupe.1G456900 Prunus persica HOM05D003201 ORTHO05D008914 1.2e-43 181.0 243 39.1
Psat5g023760 Pisum sativum HOM05D003201 ORTHO05D008914 1.6e-43 180.6 192 41.1
TPR.G12401 Trifolium pratense HOM05D003201 ORTHO05D008914 2.1e-43 180.3 268 37.3
Thecc.03G318200 Theobroma cacao HOM05D003201 ORTHO05D008914 2.7e-43 179.9 269 36.4
Phvul.009G102800 Phaseolus vulgaris HOM05D003201 ORTHO05D008914 6.1e-43 178.7 202 43.6
Sp7g18670 Schrenkiella parvula HOM05D003201 ORTHO05D008914 1.0e-42 177.9 244 36.9
Sc23g0004340 Simmondsia chinensis HOM05D003201 ORTHO05D008914 1.0e-42 177.9 207 42.0
FAN15G0760 Fragaria x ananassa HOM05D003201 ORTHO05D008914 2.3e-42 176.8 247 36.0
Glyma.06G078200 Glycine max HOM05D003201 ORTHO05D008914 6.7e-42 175.3 248 37.5
Lalb_Chr11g0064231 Lupinus albus HOM05D003201 ORTHO05D008914 1.1e-41 174.5 205 41.5
TWI18G0285 Tripterygium wilfordii HOM05D003201 ORTHO05D008914 1.5e-41 174.1 248 37.5
Ca_15643_v3 Cicer arietinum L. HOM05D000163 ORTHO05D000219 2.0e-41 173.7 182 40.7
Glyma.04G077000 Glycine max HOM05D003201 ORTHO05D008914 2.5e-41 173.3 182 44.0
BcaNung03722 Brassica carinata HOM05D000936 ORTHO05D001411 5.7e-41 172.2 269 36.8
HPP92_024271 Vanilla planifolia HOM05D003201 ORTHO05D008914 7.4e-41 171.8 254 35.4
FAN20G1097 Fragaria x ananassa HOM05D000163 ORTHO05D008914 2.4e-39 166.8 198 40.4
TAR636G2614 Trochodendron aralioides HOM05D003201 ORTHO05D008914 2.4e-39 166.8 154 50.0
arahy.Tifrunner.gnm1.ann1.6BLG7S Arachis hypogaea HOM05D003201 ORTHO05D008914 3.1e-39 166.4 235 36.2
arahy.Tifrunner.gnm1.ann1.N5J460 Arachis hypogaea HOM05D003201 ORTHO05D008914 5.3e-39 165.6 235 35.7
VMungo1309G0938 Vigna mungo HOM05D003201 ORTHO05D008914 1.2e-38 164.5 164 46.3
AUR62020698 Chenopodium quinoa HOM05D003201 ORTHO05D008914 1.5e-38 164.1 142 50.0
Sabra06G0217200 Salix brachista HOM05D002037 ORTHO05D005261 2.0e-38 163.7 254 34.3
Rhsim07G0174100 Rhododendron simsii HOM05D003201 ORTHO05D008914 2.6e-38 163.3 202 39.6
Potri.006G281101 Populus trichocarpa HOM05D003201 ORTHO05D008914 6.7e-34 148.7 175 41.1
SHI31610 Sapria himalayana HOM05D003201 ORTHO05D008914 5.0e-29 132.5 105 54.3
vmacro05085 Vaccinium macrocarpon HOM05D003201 ORTHO05D008914 5.0e-29 132.5 267 29.6
FAN27G2114 Fragaria x ananassa HOM05D000163 ORTHO05D000219 9.4e-28 128.3 148 43.2
unitig_32.g11042 Utricularia gibba HOM05D003201 ORTHO05D008914 7.4e-25 118.6 104 49.0
Sed0017242 Sechium edule HOM05D003201 ORTHO05D008914 8.2e-24 115.2 163 36.2
Zm00001eb079750 Zea mays HOM05D003201 ORTHO05D008914 1.2e-22 111.3 188 32.4
MD08G1125300 Malus domestica HOM05D003201 ORTHO05D008914 1.6e-19 100.9 132 38.6
PRCOL_00004174 Prasinoderma coloniale HOM05D003201 ORTHO05D008914 1.8e-18 97.4 205 32.2
Nn7g38306 Nelumbo nucifera HOM05D003201 ORTHO05D008914 8.8e-18 95.1 98 46.9
TPR.G12326 Trifolium pratense HOM05D003201 ORTHO05D008914 1.5e-17 94.4 70 55.7
CBR_g23989 Chara braunii HOM05D003201 ORTHO05D008914 2.6e-17 93.6 69 59.4
Cre07.g320800 Chlamydomonas reinhardtii HOM05D003201 ORTHO05D008914 2.8e-16 90.1 332 22.6
COL.COLO4_10365 Corchorus olitorius HOM05D003201 ORTHO05D008914 1.7e-13 80.9 61 59.0
Os04g0476400 Oryza sativa ssp. japonica HOM05D003201 ORTHO05D008914 3.2e-12 76.6 76 44.7
CBR_g23991 Chara braunii HOM05D003201 ORTHO05D008914 3.7e-08 63.2 46 54.3


User provided reference genes

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