Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_22390 Physcomitrium patens HOM05D007598 ORTHO05D009632 2.5e-83 312.0 153 100.0
CSS0035986 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 1.3e-07 60.5 62 48.4
SalBow8G5536 Salvia bowleyana HOM05D007598 ORTHO05D009632 2.3e-07 59.7 63 47.6
Dinv32243 Davidia involucrata HOM05D007598 ORTHO05D009632 3.9e-07 58.9 65 44.6
Pp3c19_16990 Physcomitrium patens HOM05D007598 ORTHO05D317919 3.9e-07 58.9 54 48.1
CSS0006536 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 5.1e-07 58.5 63 47.6
Gohir.D10G042400 Gossypium hirsutum HOM05D007598 ORTHO05D009632 6.6e-07 58.2 53 49.1
Mapoly0055s0099 Marchantia polymorpha HOM05D007598 ORTHO05D009632 6.6e-07 58.2 53 52.8
Aa31LG10G6810 Aethionema arabicum HOM05D007598 ORTHO05D009632 1.5e-06 57.0 88 34.1
Ah.14g086510 Amaranthus hybridus HOM05D007598 ORTHO05D009632 1.9e-06 56.6 44 56.8
AUR62030196 Chenopodium quinoa HOM05D007598 ORTHO05D009632 1.9e-06 56.6 45 53.3
Sabra11G0066800 Salix brachista HOM05D007598 ORTHO05D009632 1.9e-06 56.6 45 55.6
Atru.chr10.1775 Acer truncatum HOM05D007598 ORTHO05D009632 2.5e-06 56.2 71 40.8
Actinidia39580 Actinidia chinensis HOM05D007598 ORTHO05D009632 2.5e-06 56.2 67 43.3
Cfa000936 Carpinus fangiana HOM05D007598 ORTHO05D009632 2.5e-06 56.2 46 52.2
TAR626G0451 Trochodendron aralioides HOM05D007598 ORTHO05D009632 2.5e-06 56.2 55 45.5
AUR62002748 Chenopodium quinoa HOM05D007598 ORTHO05D009632 3.3e-06 55.8 67 43.3
HanXRQChr15g0480881 Helianthus annuus HOM05D007598 ORTHO05D009632 3.3e-06 55.8 42 59.5
Aqoxy7G00246 Aquilegia oxysepala HOM05D007598 ORTHO05D009632 4.3e-06 55.5 57 50.9
arahy.Tifrunner.gnm1.ann1.A3G0A3 Arachis hypogaea HOM05D007598 ORTHO05D009632 4.3e-06 55.5 45 53.3
arahy.Tifrunner.gnm1.ann1.KTXA2U Arachis hypogaea HOM05D007598 ORTHO05D009632 4.3e-06 55.5 45 53.3
Migut.M01992 Erythranthe guttata HOM05D007598 ORTHO05D009632 4.3e-06 55.5 51 51.0
Manes.17G070801 Manihot esculenta HOM05D007598 ORTHO05D009632 4.3e-06 55.5 46 52.2
SEGI_36626 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 4.3e-06 55.5 63 46.0
Actinidia07703 Actinidia chinensis HOM05D007598 ORTHO05D009632 5.6e-06 55.1 65 43.1
HanXRQChr04g0114301 Helianthus annuus HOM05D007598 ORTHO05D009632 5.6e-06 55.1 42 59.5
Lj6g0001552 Lotus japonicus HOM05D007598 ORTHO05D009632 5.6e-06 55.1 66 43.9
Nitab4.5_0006887g0010 Nicotiana tabacum HOM05D007598 ORTHO05D009632 5.6e-06 55.1 65 41.5
Pp3c14_11250 Physcomitrium patens HOM05D007598 ORTHO05D009632 5.6e-06 55.1 61 45.9
Sc05g0006160 Simmondsia chinensis HOM05D007598 ORTHO05D009632 5.6e-06 55.1 57 47.4
AL4G30560 Arabidopsis lyrata HOM05D007598 ORTHO05D009632 7.3e-06 54.7 62 45.2
CANSAT35G0825 Cannabis sativa HOM05D007598 ORTHO05D009632 7.3e-06 54.7 45 53.3
Migut.M00903 Erythranthe guttata HOM05D007598 ORTHO05D009632 7.3e-06 54.7 51 51.0
MBI04_g33966_MAGBIO Magnolia biondii HOM05D007833 ORTHO05D009855 7.3e-06 54.7 62 50.0
Potri.011G084300 Populus trichocarpa HOM05D007598 ORTHO05D009632 7.3e-06 54.7 45 53.3
SEGI_00564 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 7.3e-06 54.7 44 54.5
PGSC0003DMG400020049 Solanum tuberosum HOM05D007833 ORTHO05D009855 7.3e-06 54.7 51 54.9
MELO3C007128.2 Cucumis melo HOM05D007598 ORTHO05D009632 9.6e-06 54.3 56 46.4
MD10G1261400 Malus domestica HOM05D007598 ORTHO05D009632 9.6e-06 54.3 68 39.7
Rhsim02G0159000 Rhododendron simsii HOM05D007598 ORTHO05D009632 9.6e-06 54.3 44 56.8
Thecc.06G149600 Theobroma cacao HOM05D007598 ORTHO05D009632 9.6e-06 54.3 64 45.3


User provided reference genes

Program Settings