Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 4.3e-172 607.8 292 100.0
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 3.7e-99 365.5 299 59.5
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 4.4e-84 315.5 290 53.4
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 6.3e-83 311.6 288 52.8
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 8.3e-83 311.2 282 53.9
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 8.3e-83 311.2 284 53.2
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 1.1e-82 310.8 286 54.5
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 1.4e-82 310.5 279 52.3
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 1.4e-82 310.5 286 52.1
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 3.1e-82 309.3 288 51.4
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 1.6e-81 307.0 288 50.0
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 1.6e-81 307.0 297 52.2
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 2.7e-81 306.2 291 50.5
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 3.5e-81 305.8 297 51.9
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 1.0e-80 304.3 286 50.7
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 1.3e-80 303.9 289 51.2
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 2.3e-80 303.1 286 52.8
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 2.3e-80 303.1 287 52.6
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 2.3e-80 303.1 295 50.5
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 3.8e-80 302.4 287 51.2
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 5.0e-80 302.0 292 50.0
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 1.9e-79 300.1 301 48.8
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 3.3e-79 299.3 296 47.3
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 3.3e-79 299.3 289 50.5
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 3.3e-79 299.3 284 51.4
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 4.3e-79 298.9 289 48.8
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 7.3e-79 298.1 291 49.8
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 7.3e-79 298.1 286 51.0
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 9.5e-79 297.7 291 49.5
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 1.2e-78 297.4 288 50.0
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 1.2e-78 297.4 292 51.4
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 1.2e-78 297.4 288 51.4
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 1.2e-78 297.4 291 50.9
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 2.1e-78 296.6 289 49.8
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 2.8e-78 296.2 317 47.0
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 2.8e-78 296.2 291 50.5
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 3.6e-78 295.8 297 50.8
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 8.0e-78 294.7 285 52.6
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 1.0e-77 294.3 285 49.1
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 1.4e-77 293.9 294 50.0
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.8e-77 293.5 312 47.1
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.8e-77 293.5 288 51.0
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 2.3e-77 293.1 292 50.3
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 3.0e-77 292.7 297 49.8
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 4.0e-77 292.4 288 50.7
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 5.2e-77 292.0 272 50.7
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 1.2e-76 290.8 297 48.8
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 1.5e-76 290.4 286 50.7
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 1.5e-76 290.4 289 48.8
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 3.4e-76 289.3 304 48.4
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 3.4e-76 289.3 289 50.5
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 9.8e-76 287.7 291 48.5
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 4.9e-75 285.4 284 51.1
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 8.3e-75 284.6 289 47.4
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 1.1e-74 284.3 313 47.6
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 1.1e-74 284.3 313 47.6
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 1.4e-74 283.9 290 47.9
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 5.4e-74 282.0 277 50.5
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 7.0e-74 281.6 288 48.3
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 7.0e-74 281.6 287 50.2
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 1.2e-73 280.8 294 47.6
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 2.7e-73 279.6 299 47.2
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 3.5e-73 279.3 287 47.0
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 5.9e-73 278.5 249 51.0
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 1.0e-72 277.7 306 45.8
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 1.3e-72 277.3 285 49.8
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.7e-72 276.9 296 47.3
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 1.5e-71 273.9 291 46.7
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 2.5e-71 273.1 290 48.3
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 4.3e-71 272.3 242 51.2
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 1.6e-70 270.4 292 46.2
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 3.6e-70 269.2 250 49.6
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 4.7e-70 268.9 250 50.0
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 3.1e-69 266.2 272 48.5
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 3.1e-69 266.2 293 46.1
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 5.2e-69 265.4 278 50.0
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 1.7e-67 260.4 311 44.1
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 5.4e-66 255.4 287 44.6
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 7.8e-65 251.5 271 46.5
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 1.3e-64 250.8 339 40.1
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 3.0e-64 249.6 302 46.0
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 5.0e-64 248.8 252 48.8
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 5.0e-64 248.8 410 35.9
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 6.6e-64 248.4 198 55.1
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 5.6e-63 245.4 399 37.1
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 5.6e-63 245.4 198 60.1
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 3.6e-62 242.7 241 48.1
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 1.8e-61 240.4 291 43.6
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 2.3e-61 240.0 287 45.3
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 3.1e-61 239.6 238 48.3
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 1.7e-59 233.8 251 46.6
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 4.9e-59 232.3 241 48.1
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 9.2e-58 228.0 197 51.8
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 1.6e-57 227.3 311 44.4
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 1.6e-54 217.2 260 45.0
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 1.6e-54 217.2 166 56.6
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 6.8e-53 211.8 193 49.2
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 1.4e-50 204.1 178 53.9
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 3.3e-47 193.0 161 54.7
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 3.5e-41 172.9 189 46.0
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 2.2e-35 153.7 295 33.2
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.3e-32 144.4 204 39.7
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 1.8e-16 90.9 205 31.2
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 4.1e-13 79.7 77 44.2
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 2.5e-07 60.5 63 46.0
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 3.3e-07 60.1 91 37.4


User provided reference genes

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