Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 2.0e-119 432.6 232 100.0
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 1.3e-41 174.1 158 60.8
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 4.2e-37 159.1 104 76.9
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 1.2e-36 157.5 106 72.6
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 3.5e-36 156.0 104 74.0
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 2.3e-35 153.3 120 65.8
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 6.7e-35 151.8 103 70.9
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 8.7e-35 151.4 110 69.1
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 8.7e-35 151.4 127 63.0
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 1.1e-34 151.0 103 69.9
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 1.5e-34 150.6 103 69.9
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 1.5e-34 150.6 103 69.9
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 1.9e-34 150.2 100 71.0
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 2.5e-34 149.8 125 64.0
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 2.5e-34 149.8 160 52.5
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.5e-34 149.8 103 71.8
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 2.5e-34 149.8 120 64.2
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 3.3e-34 149.4 104 69.2
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 3.3e-34 149.4 118 64.4
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 3.3e-34 149.4 129 62.0
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 4.3e-34 149.1 103 69.9
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 4.3e-34 149.1 120 63.3
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 4.3e-34 149.1 103 68.9
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 5.6e-34 148.7 122 61.5
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 5.6e-34 148.7 104 68.3
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 5.6e-34 148.7 118 64.4
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 5.6e-34 148.7 100 72.0
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 7.4e-34 148.3 103 69.9
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 7.4e-34 148.3 118 63.6
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 7.4e-34 148.3 103 68.9
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 9.6e-34 147.9 99 69.7
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 9.6e-34 147.9 103 70.9
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 9.6e-34 147.9 116 64.7
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.3e-33 147.5 118 64.4
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 1.3e-33 147.5 99 71.7
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 1.3e-33 147.5 103 70.9
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 1.3e-33 147.5 103 69.9
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 2.1e-33 146.7 100 72.0
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 2.1e-33 146.7 104 68.3
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 2.1e-33 146.7 103 68.9
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 2.1e-33 146.7 121 62.0
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 2.1e-33 146.7 120 61.7
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 2.8e-33 146.4 103 68.0
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 3.7e-33 146.0 103 65.0
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 3.7e-33 146.0 103 65.0
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 3.7e-33 146.0 103 68.9
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 4.8e-33 145.6 117 64.1
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 4.8e-33 145.6 103 69.9
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 6.2e-33 145.2 99 70.7
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 6.2e-33 145.2 123 61.0
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 6.2e-33 145.2 118 61.9
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 8.2e-33 144.8 99 66.7
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 8.2e-33 144.8 119 63.9
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 1.1e-32 144.4 108 65.7
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.1e-32 144.4 109 65.1
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 1.4e-32 144.1 104 67.3
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 1.4e-32 144.1 118 64.4
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 1.4e-32 144.1 103 69.9
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.4e-32 144.1 120 60.8
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 1.4e-32 144.1 104 67.3
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 1.4e-32 144.1 102 66.7
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 1.4e-32 144.1 99 68.7
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 1.8e-32 143.7 100 70.0
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 2.4e-32 143.3 101 68.3
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 3.1e-32 142.9 104 66.3
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 3.1e-32 142.9 103 68.9
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 3.1e-32 142.9 104 66.3
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 3.1e-32 142.9 104 66.3
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 3.1e-32 142.9 104 66.3
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 3.1e-32 142.9 103 67.0
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 3.1e-32 142.9 103 68.0
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 4.0e-32 142.5 129 59.7
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 4.0e-32 142.5 108 63.9
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 5.3e-32 142.1 104 66.3
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 5.3e-32 142.1 135 58.5
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 5.3e-32 142.1 103 68.9
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 9.0e-32 141.4 119 62.2
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 9.0e-32 141.4 100 68.0
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 1.2e-31 141.0 143 53.8
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.2e-31 141.0 99 66.7
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.2e-31 141.0 117 60.7
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.5e-31 140.6 100 69.0
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 2.0e-31 140.2 99 66.7
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 2.0e-31 140.2 118 57.6
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 2.0e-31 140.2 129 58.9
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 2.0e-31 140.2 111 63.1
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 2.0e-31 140.2 139 54.7
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.0e-31 140.2 103 66.0
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.0e-31 140.2 103 66.0
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 4.5e-31 139.0 133 55.6
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 4.5e-31 139.0 101 66.3
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 4.5e-31 139.0 103 67.0
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 5.8e-31 138.7 144 52.8
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 5.8e-31 138.7 135 55.6
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 1.0e-30 137.9 103 68.0
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 2.2e-30 136.7 99 66.7
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 2.2e-30 136.7 194 44.8
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 2.9e-30 136.3 99 66.7
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 2.9e-30 136.3 102 63.7
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 1.4e-29 134.0 99 64.6
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 2.5e-29 133.3 104 61.5
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 2.5e-29 133.3 137 53.3
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 4.2e-29 132.5 114 63.2
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 7.1e-29 131.7 103 62.1
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 7.1e-29 131.7 103 62.1
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.2e-28 131.0 101 64.4
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 5.9e-23 112.1 78 67.9
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 6.5e-22 108.6 82 62.2
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 8.5e-22 108.2 69 72.5
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 3.0e-19 99.8 100 48.0
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 3.3e-18 96.3 63 73.0
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 2.0e-15 87.0 78 53.8
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 1.4e-13 80.9 44 77.3
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 3.2e-13 79.7 54 70.4
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 8.8e-11 71.6 61 57.4


User provided reference genes

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