Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 8.3e-291 1003.0 529 100.0
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 2.4e-133 479.9 517 52.6
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 1.1e-93 348.2 484 45.0
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 8.2e-89 332.0 511 40.3
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 2.6e-74 283.9 486 39.5
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 5.9e-55 219.5 495 34.9
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 2.9e-54 217.2 486 33.1
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 1.4e-51 208.4 484 33.9
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 1.2e-50 205.3 492 33.3
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 2.9e-49 200.7 304 40.5
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 9.2e-48 195.7 296 41.6
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.6e-47 194.9 270 42.2
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 4.6e-47 193.4 491 31.8
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 1.0e-46 192.2 487 31.0
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 1.3e-46 191.8 228 47.4
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 1.3e-46 191.8 270 41.9
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 1.7e-46 191.4 473 33.4
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 2.3e-46 191.0 269 41.6
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 3.9e-46 190.3 274 41.2
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 3.9e-46 190.3 261 44.8
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 8.6e-46 189.1 308 40.6
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 8.6e-46 189.1 299 38.1
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 1.5e-45 188.3 297 39.1
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 1.9e-45 188.0 265 41.9
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 1.9e-45 188.0 257 45.9
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 3.3e-45 187.2 269 40.9
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 4.3e-45 186.8 243 46.1
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 5.6e-45 186.4 240 46.2
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 7.3e-45 186.0 296 39.5
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 1.2e-44 185.3 297 39.1
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 2.1e-44 184.5 270 40.0
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 2.1e-44 184.5 269 39.0
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 2.8e-44 184.1 261 40.6
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 8.0e-44 182.6 240 45.4
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 1.1e-43 182.2 296 40.9
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 3.1e-43 180.6 248 44.8
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 5.2e-43 179.9 271 38.7
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 6.8e-43 179.5 270 39.6
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 6.8e-43 179.5 270 39.6
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 8.9e-43 179.1 276 41.7
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 8.9e-43 179.1 282 39.4
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 1.2e-42 178.7 270 39.6
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 2.6e-42 177.6 310 37.7
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 2.6e-42 177.6 490 30.6
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 4.4e-42 176.8 270 39.6
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 4.4e-42 176.8 488 29.1
SMO329G0073 Selaginella moellendorffii HOM05D007522 ORTHO05D009518 7.5e-42 176.0 119 75.6
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 1.3e-41 175.3 250 43.6
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 3.7e-41 173.7 250 42.8
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 1.9e-40 171.4 243 42.0
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 3.2e-40 170.6 243 42.0
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 3.2e-40 170.6 478 29.9
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 5.4e-40 169.9 243 43.6
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 7.0e-40 169.5 247 40.5
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 1.2e-39 168.7 297 36.7
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.6e-39 168.3 249 40.2
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 2.7e-39 167.5 216 44.9
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 4.6e-39 166.8 247 40.1
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 6.0e-39 166.4 224 42.9
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 6.0e-39 166.4 242 42.1
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 1.3e-38 165.2 262 40.1
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 1.3e-38 165.2 286 39.2
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.9e-38 163.7 249 39.4
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 8.6e-38 162.5 256 40.2
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 1.1e-37 162.2 239 41.8
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 7.3e-37 159.5 260 37.3
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 7.3e-37 159.5 299 37.8
SEGI_10687 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 3.6e-36 157.1 130 63.1
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 1.1e-35 155.6 254 40.2
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 2.3e-35 154.5 180 49.4
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 6.8e-35 152.9 240 39.6
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 8.9e-35 152.5 254 39.4
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 2.0e-34 151.4 275 36.7
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 2.6e-34 151.0 256 39.1
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 2.9e-33 147.5 197 45.2
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 1.9e-32 144.8 331 34.4
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 9.2e-32 142.5 150 50.0
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.7e-30 138.3 195 42.6
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 2.3e-30 137.9 239 36.8
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 5.1e-30 136.7 254 38.6
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 8.6e-30 136.0 145 51.0
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 8.6e-30 136.0 428 29.0
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.1e-29 135.6 198 41.4
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 2.1e-28 131.3 140 50.0
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 2.8e-28 131.0 212 40.6
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 1.8e-27 128.3 195 40.0
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 5.8e-26 123.2 225 36.4
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 4.2e-24 117.1 485 27.2
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 5.4e-24 116.7 154 42.9
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 7.1e-24 116.3 106 56.6
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.2e-18 99.0 250 32.0
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 4.4e-18 97.1 461 24.7
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 4.2e-16 90.5 91 53.8
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 6.2e-12 76.6 77 50.6
Cfa021487 Carpinus fangiana HOM05D000146 ORTHO05D007947 1.2e-10 72.4 119 38.7
VMungo1309G0092 Vigna mungo HOM05D007522 ORTHO05D009518 5.4e-08 63.5 121 30.6
Hund03006 Selenicereus undatus HOM05D007522 ORTHO05D009518 6.0e-07 60.1 126 34.9


User provided reference genes

Program Settings