Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.7e-268 926.8 467 100.0
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 1.6e-181 639.8 468 69.9
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.1e-176 622.9 464 70.3
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.4e-170 601.3 465 66.7
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 1.9e-145 520.0 484 60.1
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 4.3e-142 508.8 465 59.8
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 9.6e-142 507.7 457 59.5
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.2e-130 469.9 453 55.2
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 3.5e-115 419.5 326 61.3
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 4.5e-115 419.1 439 51.0
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 2.3e-87 327.0 308 52.6
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 1.4e-84 317.8 353 46.2
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 2.4e-84 317.0 308 51.0
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 2.4e-84 317.0 308 51.3
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 4.1e-84 316.2 308 50.6
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 1.6e-83 314.3 321 48.0
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 2.7e-83 313.5 312 49.7
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 4.6e-83 312.8 308 50.0
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 4.6e-83 312.8 308 50.6
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 1.3e-82 311.2 308 50.6
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 2.9e-82 310.1 325 48.6
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 2.9e-82 310.1 308 49.7
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 3.9e-82 309.7 308 49.4
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 5.0e-82 309.3 309 50.5
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 6.6e-82 308.9 308 49.0
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 6.6e-82 308.9 308 49.0
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 1.5e-81 307.8 308 49.0
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 1.9e-81 307.4 308 49.7
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 5.6e-81 305.8 308 48.7
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 7.3e-81 305.4 213 72.3
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 9.5e-81 305.1 316 47.2
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 2.1e-80 303.9 310 49.0
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 2.1e-80 303.9 308 49.0
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 3.6e-80 303.1 307 49.5
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 3.6e-80 303.1 307 48.9
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 3.6e-80 303.1 308 48.7
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 6.2e-80 302.4 315 46.7
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 8.0e-80 302.0 308 48.4
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 8.0e-80 302.0 307 48.9
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 1.4e-79 301.2 349 44.7
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 1.8e-79 300.8 322 48.8
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 3.1e-79 300.1 308 48.1
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 5.2e-79 299.3 308 48.1
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 8.9e-79 298.5 329 47.4
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 1.2e-78 298.1 308 47.4
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 4.4e-78 296.2 307 49.8
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 4.4e-78 296.2 308 47.7
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 4.4e-78 296.2 308 47.1
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 7.5e-78 295.4 312 48.7
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 9.8e-78 295.0 310 47.1
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 1.3e-77 294.7 308 47.4
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 1.3e-77 294.7 309 47.6
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 2.2e-77 293.9 308 47.4
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 2.2e-77 293.9 309 48.2
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 2.2e-77 293.9 308 48.4
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 2.2e-77 293.9 318 46.9
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 2.9e-77 293.5 309 47.9
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 2.9e-77 293.5 309 47.9
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 4.9e-77 292.7 313 47.0
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 8.3e-77 292.0 348 45.1
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 1.1e-76 291.6 307 46.6
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 1.1e-76 291.6 330 46.4
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 1.1e-76 291.6 310 49.0
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 1.1e-76 291.6 308 47.7
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.4e-76 290.4 313 46.6
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 3.2e-76 290.0 330 45.2
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 4.1e-76 289.7 348 44.5
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 5.4e-76 289.3 348 44.8
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 9.2e-76 288.5 308 47.1
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 2.0e-75 287.3 308 46.8
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 2.7e-75 287.0 311 47.9
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 2.3e-74 283.9 288 49.3
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 3.0e-74 283.5 340 43.5
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 3.0e-74 283.5 307 46.6
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 3.0e-74 283.5 294 46.9
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 3.0e-74 283.5 305 47.5
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 3.3e-73 280.0 317 45.1
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 7.3e-73 278.9 309 47.6
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 9.5e-73 278.5 340 43.5
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 2.8e-72 276.9 273 52.0
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 3.6e-72 276.6 316 44.6
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 1.4e-71 274.6 316 44.3
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 2.3e-71 273.9 316 44.3
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 3.1e-71 273.5 286 49.3
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 5.2e-71 272.7 318 44.0
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 6.8e-71 272.3 307 46.9
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 8.9e-71 271.9 335 43.0
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 1.2e-70 271.6 319 43.9
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 2.6e-70 270.4 309 45.3
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 9.8e-70 268.5 320 45.0
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 2.9e-69 266.9 308 43.8
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 8.3e-69 265.4 316 44.0
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 1.4e-68 264.6 277 48.0
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 2.7e-67 260.4 269 49.1
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 5.6e-65 252.7 310 42.9
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 1.4e-63 248.1 300 44.0
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 1.5e-62 244.6 258 48.1
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 5.8e-62 242.7 311 42.4
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 3.7e-61 240.0 319 40.4
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 2.4e-60 237.3 254 48.4
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 9.2e-60 235.3 234 50.0
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 6.8e-55 219.2 307 40.4
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 1.2e-54 218.4 240 46.2
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 7.3e-49 199.1 310 35.2
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 9.6e-49 198.7 223 47.5
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 1.1e-41 175.3 307 34.9
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 1.8e-34 151.4 312 30.1
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 2.3e-34 151.0 308 29.9
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 2.0e-22 111.3 103 51.5
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 6.9e-15 86.3 108 45.4
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 7.2e-12 76.3 113 37.2


User provided reference genes

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