Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_19080 Physcomitrium patens HOM05D000915 ORTHO05D050343 3.9e-81 304.7 146 100.0
Pp3c10_19090 Physcomitrium patens HOM05D000915 ORTHO05D050343 1.2e-37 160.2 99 81.8
Atru.chr10.103 Acer truncatum HOM05D000915 ORTHO05D004661 8.2e-15 84.3 69 58.0
Sp7g05540 Schrenkiella parvula HOM05D000915 ORTHO05D004661 2.4e-14 82.8 69 56.5
Pp3c3_28940 Physcomitrium patens HOM05D000915 ORTHO05D004661 3.1e-14 82.4 69 58.0
MBI10_g16328_MAGBIO Magnolia biondii HOM05D000915 ORTHO05D004661 4.1e-14 82.0 69 56.5
Cpa.g.sc108.26 Carica papaya HOM05D000915 ORTHO05D004661 5.3e-14 81.6 66 54.5
MELO3C008772.2 Cucumis melo HOM05D000915 ORTHO05D004661 5.3e-14 81.6 69 56.5
CsaV3_2G009390 Cucumis sativus L. HOM05D000915 ORTHO05D004661 5.3e-14 81.6 69 56.5
Aqoxy2G04183 Aquilegia oxysepala HOM05D000915 ORTHO05D004661 9.1e-14 80.9 83 49.4
arahy.Tifrunner.gnm1.ann1.B6931F Arachis hypogaea HOM05D000915 ORTHO05D004661 9.1e-14 80.9 69 55.1
arahy.Tifrunner.gnm1.ann1.NG8VEG Arachis hypogaea HOM05D000915 ORTHO05D004661 9.1e-14 80.9 69 55.1
CARHR216140 Cardamine hirsuta HOM05D000915 ORTHO05D004661 9.1e-14 80.9 69 55.1
Glyma.09G002900 Glycine max HOM05D000915 ORTHO05D004661 1.2e-13 80.5 69 55.1
HPP92_001293 Vanilla planifolia HOM05D000915 ORTHO05D004661 1.2e-13 80.5 69 55.1
SalBow1G2499 Salvia bowleyana HOM05D000915 ORTHO05D004661 1.6e-13 80.1 72 51.4
SalBow1G8187 Salvia bowleyana HOM05D000915 ORTHO05D004661 1.6e-13 80.1 72 51.4
VMungo0464G1334 Vigna mungo HOM05D000915 ORTHO05D004661 1.6e-13 80.1 69 53.6
BcaB06g27047 Brassica carinata HOM05D000915 ORTHO05D004661 2.0e-13 79.7 69 53.6
BcaB06g27048 Brassica carinata HOM05D000915 ORTHO05D004661 2.0e-13 79.7 69 53.6
BcaC02g09536 Brassica carinata HOM05D000915 ORTHO05D004661 2.0e-13 79.7 69 53.6
C04p43880 Brassica napus HOM05D000915 ORTHO05D004661 2.0e-13 79.7 69 53.6
BolC4t25968H Brassica oleracea HOM05D000915 ORTHO05D004661 2.0e-13 79.7 69 53.6
BraA04t16708Z Brassica rapa HOM05D000915 ORTHO05D004661 2.0e-13 79.7 69 53.6
ClCG11G011090 Citrullus lanatus HOM05D000915 ORTHO05D004661 2.0e-13 79.7 69 55.1
COL.COLO4_37033 Corchorus olitorius HOM05D000915 ORTHO05D004661 2.0e-13 79.7 69 53.6
Haze_24511 Corylus avellana HOM05D000915 ORTHO05D004661 2.0e-13 79.7 72 52.8
Psat1g053280 Pisum sativum HOM05D000915 ORTHO05D004661 2.0e-13 79.7 73 52.1
Potri.008G079900 Populus trichocarpa HOM05D000915 ORTHO05D004661 2.0e-13 79.7 69 53.6
QL01p018904 Quercus lobata HOM05D000915 ORTHO05D004661 2.0e-13 79.7 69 52.2
Aa31LG9G17740 Aethionema arabicum HOM05D000915 ORTHO05D004661 2.6e-13 79.3 69 53.6
CSS0025216 Camellia sinensis var. sinensis HOM05D000915 ORTHO05D004661 2.6e-13 79.3 69 55.1
CiPaw.03G255500 Carya illinoinensis HOM05D000915 ORTHO05D004661 2.6e-13 79.3 69 53.6
Rhsim05G0162100 Rhododendron simsii HOM05D000915 ORTHO05D004661 3.5e-13 79.0 69 52.2
Sc09g0001240 Simmondsia chinensis HOM05D000915 ORTHO05D004661 3.5e-13 79.0 69 53.6
TWI36G1482 Tripterygium wilfordii HOM05D000915 ORTHO05D004661 3.5e-13 79.0 68 54.4
AL7G45580 Arabidopsis lyrata HOM05D000915 ORTHO05D004661 4.5e-13 78.6 69 53.6
MSTRG.9232 Avicennia marina HOM05D000915 ORTHO05D004661 4.5e-13 78.6 72 51.4
A04p10370 Brassica napus HOM05D000915 ORTHO05D004661 4.5e-13 78.6 69 52.2
Lj2g0014760 Lotus japonicus HOM05D000915 ORTHO05D004661 4.5e-13 78.6 69 53.6
Lalb_Chr04g0264061 Lupinus albus HOM05D000915 ORTHO05D004661 4.5e-13 78.6 69 53.6
THA.LOC104805673 Tarenaya hassleriana HOM05D000915 ORTHO05D004661 4.5e-13 78.6 80 47.5
Ciclev10014700m.g Citrus clementina HOM05D000915 ORTHO05D004661 5.9e-13 78.2 69 53.6
Gorai.008G097600 Gossypium raimondii HOM05D000915 ORTHO05D004661 5.9e-13 78.2 69 52.2
Sed0020368 Sechium edule HOM05D000915 ORTHO05D004661 5.9e-13 78.2 69 53.6
AT5G36950 Arabidopsis thaliana HOM05D000915 ORTHO05D004661 7.7e-13 77.8 69 53.6
Carub.0007s3220 Capsella rubella HOM05D000915 ORTHO05D004661 7.7e-13 77.8 69 53.6
Ca_04132_v3 Cicer arietinum L. HOM05D000915 ORTHO05D004661 7.7e-13 77.8 69 52.2
Lju50A16G16 Lonicera japonica HOM05D000915 ORTHO05D004661 7.7e-13 77.8 69 52.2
Medtr6g004110 Medicago truncatula HOM05D000915 ORTHO05D004661 7.7e-13 77.8 69 52.2
Nn1g09427 Nelumbo nucifera HOM05D000915 ORTHO05D004661 7.7e-13 77.8 69 52.2
PSO732G0472 Papaver somniferum HOM05D000915 ORTHO05D004661 7.7e-13 77.8 69 53.6
PGR031G3228 Punica granatum HOM05D000915 ORTHO05D004661 7.7e-13 77.8 69 52.2
TPR.G25246 Trifolium pratense HOM05D000915 ORTHO05D004661 7.7e-13 77.8 69 52.2
EL10Ac4g10048 Beta vulgaris HOM05D000915 ORTHO05D004661 1.0e-12 77.4 69 53.6
Duzib114G0126 Durio zibethinus HOM05D000915 ORTHO05D004661 1.0e-12 77.4 69 52.2
PGSC0003DMG400016238 Solanum tuberosum HOM05D000915 ORTHO05D004661 1.0e-12 77.4 69 52.2
vmacro19558 Vaccinium macrocarpon HOM05D000915 ORTHO05D004661 1.0e-12 77.4 69 50.7
Nitab4.5_0001653g0160 Nicotiana tabacum HOM05D000915 ORTHO05D004661 1.3e-12 77.0 69 52.2
Nitab4.5_0012874g0020 Nicotiana tabacum HOM05D000915 ORTHO05D004661 1.3e-12 77.0 69 52.2
Peaxi162Scf00344g00048 Petunia axillaris HOM05D000915 ORTHO05D004661 1.3e-12 77.0 69 52.2
Phvul.004G000300 Phaseolus vulgaris HOM05D000915 ORTHO05D004661 1.3e-12 77.0 69 52.2
Hund07401 Selenicereus undatus HOM05D000915 ORTHO05D004661 1.3e-12 77.0 69 52.2
Solyc11g008850.2 Solanum lycopersicum HOM05D000915 ORTHO05D004661 1.3e-12 77.0 69 52.2
Sopen11g004630 Solanum pennellii HOM05D000915 ORTHO05D004661 1.3e-12 77.0 69 52.2
TAR362G0613 Trochodendron aralioides HOM05D000915 ORTHO05D004661 1.3e-12 77.0 69 52.2
Eucgr.I00006 Eucalyptus grandis HOM05D000915 ORTHO05D004661 1.7e-12 76.6 69 50.7
Oeu057529.2 Olea europaea HOM05D000915 ORTHO05D004661 1.7e-12 76.6 69 52.2
Cc09_g04340 Coffea canephora HOM05D000915 ORTHO05D004661 2.2e-12 76.3 69 50.7
PSO675G6658 Papaver somniferum HOM05D000915 ORTHO05D004661 2.2e-12 76.3 69 53.6
CANSAT64G0733 Cannabis sativa HOM05D000915 ORTHO05D004661 2.9e-12 75.9 69 52.2
Cfa002304 Carpinus fangiana HOM05D000915 ORTHO05D004661 2.9e-12 75.9 69 50.7
DCAR_000193 Daucus carota HOM05D000915 ORTHO05D004661 2.9e-12 75.9 69 52.2
DCAR_004094 Daucus carota HOM05D000915 ORTHO05D004661 2.9e-12 75.9 69 52.2
Dinv03281 Davidia involucrata HOM05D000915 ORTHO05D004661 2.9e-12 75.9 69 50.7
Migut.F02074 Erythranthe guttata HOM05D000915 ORTHO05D004661 3.8e-12 75.5 69 52.2
Manes.12G000700 Manihot esculenta HOM05D000915 ORTHO05D004661 3.8e-12 75.5 69 50.7
unitig_37.g12277 Utricularia gibba HOM05D000915 ORTHO05D004661 3.8e-12 75.5 69 52.2
ATR0743G116 Amborella trichopoda HOM05D000915 ORTHO05D004661 5.0e-12 75.1 69 49.3
CAN.G691.27 Capsicum annuum HOM05D000915 ORTHO05D004661 5.0e-12 75.1 69 50.7
Os05g0417100 Oryza sativa ssp. japonica HOM05D000915 ORTHO05D004661 5.0e-12 75.1 69 50.7
SGA_v2.0_scaffold62G21481 Striga asiatica HOM05D000915 ORTHO05D004661 6.5e-12 74.7 69 53.6
FAN21G3809 Fragaria x ananassa HOM05D000915 ORTHO05D004661 8.5e-12 74.3 69 49.3
Prupe.4G000300 Prunus persica HOM05D000915 ORTHO05D004661 8.5e-12 74.3 69 50.7
Ah.04g159450 Amaranthus hybridus HOM05D000915 ORTHO05D004661 1.1e-11 73.9 69 50.7
Gohir.A12G090500 Gossypium hirsutum HOM05D000915 ORTHO05D004661 1.1e-11 73.9 69 49.3
Thhalv10027701m.g Eutrema salsugineum HOM05D000915 ORTHO05D004661 1.5e-11 73.6 69 50.7
MD08G1000100 Malus domestica HOM05D000915 ORTHO05D004661 1.5e-11 73.6 69 50.7
GSVIVG01003912001 Vitis vinifera HOM05D000915 ORTHO05D004661 1.5e-11 73.6 69 49.3
AUR62000250 Chenopodium quinoa HOM05D000915 ORTHO05D004661 1.9e-11 73.2 69 50.7
AUR62006595 Chenopodium quinoa HOM05D000915 ORTHO05D004661 1.9e-11 73.2 69 50.7
CDE04G3425 Ceratophyllum demersum HOM05D000915 ORTHO05D004661 2.5e-11 72.8 69 49.3
CDE07G0549 Ceratophyllum demersum HOM05D000915 ORTHO05D004661 2.5e-11 72.8 69 49.3
RcHm_v2.0_Chr5g0000001 Rosa chinensis HOM05D000915 ORTHO05D004661 3.2e-11 72.4 69 49.3
SMO358G0112 Selaginella moellendorffii HOM05D000915 ORTHO05D004661 3.2e-11 72.4 69 53.6
Actinidia03269 Actinidia chinensis HOM05D000915 ORTHO05D004661 5.5e-11 71.6 72 44.4
CiPaw.03G255600 Carya illinoinensis HOM05D000915 ORTHO05D004661 5.5e-11 71.6 69 50.7
HanXRQChr07g0194651 Helianthus annuus HOM05D000915 ORTHO05D004661 7.2e-11 71.2 69 47.8
Lsat_1_v5_gn_2_108421 Lactuca sativa HOM05D000915 ORTHO05D004661 1.2e-10 70.5 69 46.4
Actinidia40014 Actinidia chinensis HOM05D000915 ORTHO05D004661 1.6e-10 70.1 72 45.8
ECA238G4792 Erigeron canadensis HOM05D000915 ORTHO05D004661 1.6e-10 70.1 69 46.4
Mapoly0093s0033 Marchantia polymorpha HOM05D000915 ORTHO05D004661 2.1e-10 69.7 69 52.2
Actinidia19657 Actinidia chinensis HOM05D000915 ORTHO05D004661 2.7e-10 69.3 72 45.8
MCO11G131 Micromonas commoda HOM05D000915 ORTHO05D004661 4.7e-10 68.6 66 47.0
ATR0743G105 Amborella trichopoda HOM05D000915 ORTHO05D004661 1.4e-09 67.0 69 46.4
Glyma.05G000400 Glycine max HOM05D000915 ORTHO05D004661 1.2e-08 63.9 47 61.7
Eucgr.I00047 Eucalyptus grandis HOM05D000915 ORTHO05D004661 7.5e-08 61.2 69 46.4
Cre01.g013300 Chlamydomonas reinhardtii HOM05D000915 ORTHO05D004661 9.7e-08 60.8 84 36.9
Sabra10G0135900 Salix brachista HOM05D000915 ORTHO05D004661 3.1e-06 55.8 68 39.7
Lju50A16G14 Lonicera japonica HOM05D000915 ORTHO05D004661 4.1e-06 55.5 52 48.1


User provided reference genes

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