Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_18150 Physcomitrium patens HOM05D005610 ORTHO05D006181 3.1e-93 345.1 176 100.0
Mapoly0014s0199 Marchantia polymorpha HOM05D005610 ORTHO05D006181 6.2e-41 171.4 120 69.2
Pp3c3_34050 Physcomitrium patens HOM05D005610 ORTHO05D006181 1.3e-38 163.7 89 91.0
SEGI_23772 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 5.6e-34 148.3 111 61.3
Aqoxy4G02780 Aquilegia oxysepala HOM05D005610 ORTHO05D006181 1.7e-30 136.7 106 60.4
EL10Ac4g08756 Beta vulgaris HOM05D005610 ORTHO05D006181 1.7e-30 136.7 110 60.0
TAR624G0514 Trochodendron aralioides HOM05D005610 ORTHO05D006181 2.9e-30 136.0 108 61.1
PSO210G2880 Papaver somniferum HOM05D005610 ORTHO05D006181 8.4e-30 134.4 107 57.9
PSO302G0046 Papaver somniferum HOM05D005610 ORTHO05D006181 1.1e-29 134.0 106 57.5
ClCG07G002910 Citrullus lanatus HOM05D005610 ORTHO05D006181 2.4e-29 132.9 113 56.6
Duzib235G0930 Durio zibethinus HOM05D005610 ORTHO05D006181 3.2e-29 132.5 107 57.9
Nn8g38603 Nelumbo nucifera HOM05D005610 ORTHO05D006181 3.2e-29 132.5 105 58.1
SMO200G0153 Selaginella moellendorffii HOM05D005610 ORTHO05D006181 3.2e-29 132.5 110 55.5
AUR62034142 Chenopodium quinoa HOM05D005610 ORTHO05D006181 4.1e-29 132.1 110 56.4
Gohir.A06G152700 Gossypium hirsutum HOM05D005610 ORTHO05D006181 4.1e-29 132.1 107 57.0
SGA_v2.0_scaffold7G03768 Striga asiatica HOM05D005610 ORTHO05D006181 5.4e-29 131.7 109 58.7
AUR62014294 Chenopodium quinoa HOM05D005610 ORTHO05D006181 7.1e-29 131.3 110 56.4
Hund25163 Selenicereus undatus HOM05D005610 ORTHO05D006181 7.1e-29 131.3 110 54.5
GSVIVG01008189001 Vitis vinifera HOM05D005610 ORTHO05D006181 7.1e-29 131.3 106 57.5
ClCG01G011300 Citrullus lanatus HOM05D005610 ORTHO05D006181 9.2e-29 131.0 110 57.3
Cc00_g15270 Coffea canephora HOM05D005610 ORTHO05D006181 9.2e-29 131.0 111 57.7
COL.COLO4_31865 Corchorus olitorius HOM05D005610 ORTHO05D006181 9.2e-29 131.0 112 56.2
SalBow8G2682 Salvia bowleyana HOM05D005610 ORTHO05D006181 9.2e-29 131.0 111 56.8
Thecc.06G231600 Theobroma cacao HOM05D005610 ORTHO05D006181 9.2e-29 131.0 106 57.5
Actinidia26870 Actinidia chinensis HOM05D005610 ORTHO05D006181 1.2e-28 130.6 105 58.1
Atru.chr1.2482 Acer truncatum HOM05D005610 ORTHO05D006181 1.6e-28 130.2 105 57.1
MSTRG.13119 Avicennia marina HOM05D005610 ORTHO05D006181 1.6e-28 130.2 109 56.9
CDE04G2721 Ceratophyllum demersum HOM05D005610 ORTHO05D006181 1.6e-28 130.2 105 56.2
Thecc.10G135500 Theobroma cacao HOM05D005610 ORTHO05D006181 1.6e-28 130.2 106 57.5
Gorai.010G185800 Gossypium raimondii HOM05D005610 ORTHO05D006181 2.1e-28 129.8 107 57.0
Oeu052223.1 Olea europaea HOM05D005610 ORTHO05D006181 2.1e-28 129.8 109 56.9
MELO3C008876.2 Cucumis melo HOM05D005610 ORTHO05D006181 2.7e-28 129.4 110 56.4
Migut.H01600 Erythranthe guttata HOM05D005610 ORTHO05D006181 3.5e-28 129.0 109 57.8
Manes.16G001300 Manihot esculenta HOM05D005610 ORTHO05D006181 3.5e-28 129.0 111 59.5
Nitab4.5_0018980g0020 Nicotiana tabacum HOM05D005610 ORTHO05D006181 3.5e-28 129.0 107 57.9
SGA_v2.0_scaffold4G01884 Striga asiatica HOM05D005610 ORTHO05D006181 3.5e-28 129.0 109 57.8
Thecc.10G134700 Theobroma cacao HOM05D005610 ORTHO05D006181 3.5e-28 129.0 106 56.6
CsaV3_4G031690 Cucumis sativus L. HOM05D005610 ORTHO05D006181 4.6e-28 128.6 110 55.5
Sed0027170 Sechium edule HOM05D005610 ORTHO05D006181 4.6e-28 128.6 113 54.9
PGR142G4331 Punica granatum HOM05D005610 ORTHO05D006181 6.0e-28 128.3 105 59.0
Ciclev10017234m.g Citrus clementina HOM05D005610 ORTHO05D006181 7.8e-28 127.9 102 58.8
arahy.Tifrunner.gnm1.ann1.PD4MQY Arachis hypogaea HOM05D005610 ORTHO05D006181 1.0e-27 127.5 122 54.1
CAN.G1263.12 Capsicum annuum HOM05D005610 ORTHO05D006181 1.0e-27 127.5 107 57.0
Cpa.g.sc152.66 Carica papaya HOM05D005610 ORTHO05D006181 1.0e-27 127.5 107 56.1
Prupe.8G114900 Prunus persica HOM05D005610 ORTHO05D006181 1.0e-27 127.5 105 57.1
Prupe.8G115200 Prunus persica HOM05D005610 ORTHO05D006181 1.0e-27 127.5 105 57.1
QL10p003579 Quercus lobata HOM05D005610 ORTHO05D006181 1.0e-27 127.5 105 57.1
Sopen04g006810 Solanum pennellii HOM05D005610 ORTHO05D006181 1.0e-27 127.5 107 57.0
Zm00001eb234830 Zea mays HOM05D005610 ORTHO05D006181 1.0e-27 127.5 106 59.4
Nitab4.5_0001867g0090 Nicotiana tabacum HOM05D005610 ORTHO05D006181 1.3e-27 127.1 107 57.0
Medtr8g106470 Medicago truncatula HOM05D005610 ORTHO05D006181 1.7e-27 126.7 107 57.9
Nitab4.5_0001701g0220 Nicotiana tabacum HOM05D005610 ORTHO05D006181 1.7e-27 126.7 107 57.0
Peaxi162Scf00442g00523 Petunia axillaris HOM05D005610 ORTHO05D006181 1.7e-27 126.7 107 57.0
PGSC0003DMG400023560 Solanum tuberosum HOM05D005610 ORTHO05D006181 1.7e-27 126.7 107 57.0
ATR1153G018 Amborella trichopoda HOM05D005610 ORTHO05D006181 2.3e-27 126.3 106 55.7
Nitab4.5_0008006g0060 Nicotiana tabacum HOM05D005610 ORTHO05D006181 2.3e-27 126.3 107 57.0
Oeu054255.1 Olea europaea HOM05D005610 ORTHO05D006181 2.3e-27 126.3 109 56.0
Solyc04g014700.4 Solanum lycopersicum HOM05D005610 ORTHO05D006181 2.3e-27 126.3 107 56.1
Haze_06904 Corylus avellana HOM05D005610 ORTHO05D006181 3.0e-27 125.9 105 58.1
Dinv13959 Davidia involucrata HOM05D005610 ORTHO05D006181 3.0e-27 125.9 105 56.2
TWI38G1154 Tripterygium wilfordii HOM05D005610 ORTHO05D006181 3.0e-27 125.9 109 55.0
Duzib160G0112 Durio zibethinus HOM05D005610 ORTHO05D006181 3.9e-27 125.6 107 53.3
CSS0047184 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 5.1e-27 125.2 105 57.1
Eucgr.B02596 Eucalyptus grandis HOM05D005610 ORTHO05D006181 5.1e-27 125.2 100 58.0
AL3G10740 Arabidopsis lyrata HOM05D005610 ORTHO05D006181 6.6e-27 124.8 109 55.0
CiPaw.10G076800 Carya illinoinensis HOM05D005610 ORTHO05D006181 6.6e-27 124.8 105 57.1
MD10G1088300 Malus domestica HOM05D005610 ORTHO05D006181 6.6e-27 124.8 105 56.2
Lj4g0017663 Lotus japonicus HOM05D005610 ORTHO05D006181 8.7e-27 124.4 111 55.0
Lj5g0020791 Lotus japonicus HOM05D005610 ORTHO05D006181 8.7e-27 124.4 111 55.0
Glyma.19G169600 Glycine max HOM05D005610 ORTHO05D006181 1.1e-26 124.0 107 56.1
Phvul.004G117800 Phaseolus vulgaris HOM05D005610 ORTHO05D006181 1.1e-26 124.0 107 56.1
Aa31LG5G10530 Aethionema arabicum HOM05D005610 ORTHO05D006181 1.5e-26 123.6 105 57.1
AT3G01435 Arabidopsis thaliana HOM05D005610 ORTHO05D006181 1.5e-26 123.6 109 55.0
Cc09_g00980 Coffea canephora HOM05D005610 ORTHO05D006181 1.5e-26 123.6 109 55.0
BNapus_Darmor_BZH_scaffold_133p00040 Brassica napus HOM05D005610 ORTHO05D006181 1.9e-26 123.2 109 53.2
BraA01t04664Z Brassica rapa HOM05D005610 ORTHO05D006181 1.9e-26 123.2 109 53.2
Zm00001eb206370 Zea mays HOM05D005610 ORTHO05D006181 1.9e-26 123.2 99 63.6
arahy.Tifrunner.gnm1.ann1.IYUI89 Arachis hypogaea HOM05D003989 ORTHO05D004626 2.5e-26 122.9 119 52.9
HanXRQChr05g0129341 Helianthus annuus HOM05D005610 ORTHO05D006181 2.5e-26 122.9 105 56.2
vmacro03652 Vaccinium macrocarpon HOM05D005610 ORTHO05D006181 2.5e-26 122.9 108 53.7
BcaC09g47662 Brassica carinata HOM05D005610 ORTHO05D006181 3.3e-26 122.5 109 52.3
Carub.0003s0067 Capsella rubella HOM05D005610 ORTHO05D006181 3.3e-26 122.5 109 54.1
Ca_13393_v3 Cicer arietinum L. HOM05D005610 ORTHO05D006181 3.3e-26 122.5 107 54.2
ECA238G1057 Erigeron canadensis HOM05D005610 ORTHO05D006181 3.3e-26 122.5 105 55.2
Medtr1g023330 Medicago truncatula HOM05D005610 ORTHO05D006181 3.3e-26 122.5 107 56.1
Ah.06g187910 Amaranthus hybridus HOM05D005610 ORTHO05D006181 4.3e-26 122.1 97 57.7
CARHR075530 Cardamine hirsuta HOM05D005610 ORTHO05D006181 4.3e-26 122.1 109 54.1
FvH4_2g07070 Fragaria vesca HOM05D005610 ORTHO05D006181 4.3e-26 122.1 105 57.1
ATR0723G088 Amborella trichopoda HOM05D005610 ORTHO05D006181 5.6e-26 121.7 106 54.7
RcHm_v2.0_Chr6g0259461 Rosa chinensis HOM05D005610 ORTHO05D006181 5.6e-26 121.7 105 56.2
Thhalv10022365m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 7.3e-26 121.3 109 51.4
FAN15G0825 Fragaria x ananassa HOM05D005610 ORTHO05D006181 7.3e-26 121.3 105 56.2
Glyma.03G168300 Glycine max HOM05D005610 ORTHO05D006181 7.3e-26 121.3 105 56.2
Os02g0189100 Oryza sativa ssp. japonica HOM05D005610 ORTHO05D006181 7.3e-26 121.3 108 57.4
Sp3g00630 Schrenkiella parvula HOM05D005610 ORTHO05D006181 7.3e-26 121.3 109 52.3
THA.LOC104822382 Tarenaya hassleriana HOM05D005610 ORTHO05D006181 1.2e-25 120.6 109 54.1
unitig_748.g7924 Utricularia gibba HOM05D000772 ORTHO05D006181 1.6e-25 120.2 108 53.7
Lalb_Chr04g0257231 Lupinus albus HOM05D005610 ORTHO05D006181 2.8e-25 119.4 107 55.1
HPP92_003728 Vanilla planifolia HOM05D005610 ORTHO05D006181 2.8e-25 119.4 109 54.1
AagrBONN_evm.TU.Sc2ySwM_228.3334 Anthoceros agrestis HOM05D005610 ORTHO05D006181 4.7e-25 118.6 137 44.5
Lj6g0026774 Lotus japonicus HOM05D005610 ORTHO05D006181 4.7e-25 118.6 110 49.1
CANSAT01G2220 Cannabis sativa HOM05D005610 ORTHO05D006181 6.2e-25 118.2 107 52.3
Potri.004G001600 Populus trichocarpa HOM05D005610 ORTHO05D006181 1.8e-24 116.7 102 52.0
A05p44570 Brassica napus HOM05D005610 ORTHO05D006181 4.0e-24 115.5 109 49.5
BraA05t23199Z Brassica rapa HOM05D005610 ORTHO05D006181 4.0e-24 115.5 109 49.5
Sabra04G0000600 Salix brachista HOM05D005610 ORTHO05D006181 5.2e-24 115.2 102 52.0
BolC5t35148H Brassica oleracea HOM05D005610 ORTHO05D006181 6.9e-24 114.8 105 50.5
C09p75160 Brassica napus HOM05D005610 ORTHO05D006181 7.6e-23 111.3 105 49.5
Thhalv10022907m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 7.6e-23 111.3 124 44.4
BolC1t05956H Brassica oleracea HOM05D005610 ORTHO05D006181 4.9e-22 108.6 130 43.1
VMungo0464G1641 Vigna mungo HOM05D005610 ORTHO05D006181 6.4e-22 108.2 131 45.0
Lsat_1_v5_gn_7_13401 Lactuca sativa HOM05D005610 ORTHO05D006181 5.4e-21 105.1 102 50.0
CBR_g27782 Chara braunii HOM05D005610 ORTHO05D001468 1.6e-20 103.6 113 47.8
Gohir.D06G159100 Gossypium hirsutum HOM05D005610 ORTHO05D006181 3.5e-20 102.4 83 55.4
MBI19_g29445_MAGBIO Magnolia biondii HOM05D005610 ORTHO05D006181 3.9e-19 99.0 131 41.2
CSS0025052 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 1.9e-18 96.7 81 54.3
Psat6g005240 Pisum sativum HOM05D005610 ORTHO05D006181 1.9e-18 96.7 81 59.3
FAN24G2055 Fragaria x ananassa HOM05D005610 ORTHO05D006181 3.3e-18 95.9 81 54.3
Dinv29757 Davidia involucrata HOM05D005610 ORTHO05D006181 7.3e-18 94.7 71 63.4
HanXRQChr15g0470051 Helianthus annuus HOM05D005610 ORTHO05D006181 4.8e-17 92.0 85 54.1
Zm00001eb004040 Zea mays HOM05D005610 ORTHO05D006181 1.4e-16 90.5 74 58.1
Actinidia02323 Actinidia chinensis HOM05D005610 ORTHO05D006181 3.1e-16 89.4 69 58.0
BNapus_Darmor_BZH_scaffold_119p00050 Brassica napus HOM05D005610 ORTHO05D006181 5.3e-16 88.6 77 53.2
BNapus_Darmor_BZH_scaffold_97p00380 Brassica napus HOM05D005610 ORTHO05D006181 5.3e-16 88.6 77 53.2
TAR626G0207 Trochodendron aralioides HOM05D005610 ORTHO05D006181 2.6e-15 86.3 168 33.9
Thecc.10G135300 Theobroma cacao HOM05D005610 ORTHO05D006181 1.1e-13 80.9 63 61.9
FAN27G3428 Fragaria x ananassa HOM05D005610 ORTHO05D006181 3.5e-12 75.9 74 48.6
Eucgr.K02585 Eucalyptus grandis HOM05D005610 ORTHO05D006181 4.6e-12 75.5 63 58.7
TPR.G7342 Trifolium pratense HOM05D005610 ORTHO05D006181 1.6e-09 67.0 56 53.6
Sc16g0007910 Simmondsia chinensis HOM05D005610 ORTHO05D006181 2.8e-09 66.2 51 62.7
FAN20G1916 Fragaria x ananassa HOM05D005610 ORTHO05D006181 6.2e-09 65.1 73 46.6
SEGI_27415 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 1.8e-08 63.5 60 46.7
Rhsim13G0147700 Rhododendron simsii HOM05D005610 ORTHO05D006181 4.0e-08 62.4 52 55.8


User provided reference genes

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