Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_16910 Physcomitrium patens HOM05D004765 ORTHO05D315325 1.5e-56 222.6 114 100.0
Pp3c12_11630 Physcomitrium patens HOM05D004765 ORTHO05D005900 4.3e-11 71.6 107 43.9
SMO141G0161 Selaginella moellendorffii HOM05D004765 ORTHO05D005900 2.4e-09 65.9 114 40.4
Peaxi162Scf00345g01023 Petunia axillaris HOM05D004765 ORTHO05D005900 2.6e-08 62.4 112 37.5
Solyc01g009380.3 Solanum lycopersicum HOM05D004765 ORTHO05D005900 2.6e-08 62.4 110 38.2
ATR0081G060 Amborella trichopoda HOM05D004765 ORTHO05D005900 4.5e-08 61.6 112 35.7
Gohir.D05G082500 Gossypium hirsutum HOM05D004765 ORTHO05D005900 5.8e-08 61.2 112 37.5
Gorai.009G084100 Gossypium raimondii HOM05D004765 ORTHO05D005900 5.8e-08 61.2 112 37.5
Lj3g0002417 Lotus japonicus HOM05D004765 ORTHO05D005900 5.8e-08 61.2 112 36.6
Atru.chr3.3169 Acer truncatum HOM05D004765 ORTHO05D005900 7.6e-08 60.8 112 36.6
Cc01_g08830 Coffea canephora HOM05D004765 ORTHO05D005900 7.6e-08 60.8 112 36.6
Potri.009G160400 Populus trichocarpa HOM05D004765 ORTHO05D005900 1.3e-07 60.1 112 36.6
MSTRG.18770 Avicennia marina HOM05D004765 ORTHO05D005900 1.7e-07 59.7 112 35.7
CSS0013873 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 1.7e-07 59.7 107 35.5
CSS0028820 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 1.7e-07 59.7 107 35.5
Migut.D02363 Erythranthe guttata HOM05D004765 ORTHO05D005900 1.7e-07 59.7 112 33.9
Migut.N02474 Erythranthe guttata HOM05D004765 ORTHO05D005900 1.7e-07 59.7 108 37.0
Lalb_Chr01g0004931 Lupinus albus HOM05D004765 ORTHO05D005900 1.7e-07 59.7 112 35.7
Sed0019641 Sechium edule HOM05D004765 ORTHO05D005900 1.7e-07 59.7 108 37.0
Actinidia07259 Actinidia chinensis HOM05D004765 ORTHO05D005900 2.2e-07 59.3 107 34.6
CAN.G745.10 Capsicum annuum HOM05D004765 ORTHO05D005900 2.2e-07 59.3 112 33.9
ClCG01G011820 Citrullus lanatus HOM05D004765 ORTHO05D005900 2.2e-07 59.3 108 37.0
QL01p011857 Quercus lobata HOM05D004765 ORTHO05D005900 2.2e-07 59.3 112 36.6
Sabra04G0134200 Salix brachista HOM05D004765 ORTHO05D005900 2.2e-07 59.3 112 35.7
Ciclev10028115m.g Citrus clementina HOM05D004765 ORTHO05D005900 2.9e-07 58.9 107 35.5
ECA248G3663 Erigeron canadensis HOM05D004765 ORTHO05D005900 2.9e-07 58.9 112 38.4
Nitab4.5_0000731g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 2.9e-07 58.9 112 34.8
arahy.Tifrunner.gnm1.ann1.E8Y1JT Arachis hypogaea HOM05D004765 ORTHO05D005900 3.8e-07 58.5 112 37.5
Dinv22819 Davidia involucrata HOM05D004765 ORTHO05D005900 3.8e-07 58.5 107 35.5
Medtr4g052530 Medicago truncatula HOM05D004765 ORTHO05D005900 3.8e-07 58.5 112 34.8
Nitab4.5_0003068g0090 Nicotiana tabacum HOM05D004765 ORTHO05D005900 3.8e-07 58.5 112 35.7
Oeu051604.1 Olea europaea HOM05D004765 ORTHO05D005900 3.8e-07 58.5 111 35.1
DCAR_006171 Daucus carota HOM05D004765 ORTHO05D005900 4.9e-07 58.2 110 36.4
Nitab4.5_0000227g0370 Nicotiana tabacum HOM05D004765 ORTHO05D005900 4.9e-07 58.2 112 35.7
Sabra09G0125600 Salix brachista HOM05D004765 ORTHO05D005900 4.9e-07 58.2 111 36.0
GSVIVG01036081001 Vitis vinifera HOM05D004765 ORTHO05D005900 4.9e-07 58.2 112 36.6
Lalb_Chr03g0028231 Lupinus albus HOM05D004765 ORTHO05D005900 6.4e-07 57.8 107 34.6
Oeu014468.1 Olea europaea HOM05D004765 ORTHO05D005900 6.4e-07 57.8 111 35.1
Rhsim01G0203800 Rhododendron simsii HOM05D004765 ORTHO05D005900 6.4e-07 57.8 112 35.7
arahy.Tifrunner.gnm1.ann1.HXUJ4C Arachis hypogaea HOM05D004765 ORTHO05D005900 8.4e-07 57.4 112 36.6
Haze_23347 Corylus avellana HOM05D004765 ORTHO05D005900 8.4e-07 57.4 107 35.5
Manes.11G164300 Manihot esculenta HOM05D004765 ORTHO05D005900 8.4e-07 57.4 107 33.6
Psat7g187280 Pisum sativum HOM05D004765 ORTHO05D005900 8.4e-07 57.4 112 33.9
TPR.G17196 Trifolium pratense HOM05D004765 ORTHO05D005900 8.4e-07 57.4 112 33.9
TWI79G1303 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 8.4e-07 57.4 103 36.9
Actinidia24229 Actinidia chinensis HOM05D004765 ORTHO05D005900 1.1e-06 57.0 107 34.6
Dinv08934 Davidia involucrata HOM05D004765 ORTHO05D005900 1.1e-06 57.0 112 34.8
Gohir.A09G097000 Gossypium hirsutum HOM05D004765 ORTHO05D005900 1.1e-06 57.0 112 37.5
Gohir.D09G096800 Gossypium hirsutum HOM05D004765 ORTHO05D005900 1.1e-06 57.0 112 37.5
Gorai.006G113500 Gossypium raimondii HOM05D004765 ORTHO05D005900 1.1e-06 57.0 112 37.5
Potri.004G198200 Populus trichocarpa HOM05D004765 ORTHO05D005900 1.1e-06 57.0 112 33.9
VMungo1127G1239 Vigna mungo HOM05D004765 ORTHO05D005900 1.1e-06 57.0 112 33.9
CSS0015967 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 1.4e-06 56.6 112 35.7
MELO3C025589.2 Cucumis melo HOM05D004765 ORTHO05D005900 1.4e-06 56.6 108 36.1
CsaV3_1G015080 Cucumis sativus L. HOM05D004765 ORTHO05D005900 1.4e-06 56.6 108 36.1
Duzib168G0312 Durio zibethinus HOM05D004765 ORTHO05D005900 1.4e-06 56.6 112 36.6
Glyma.11G181400 Glycine max HOM05D004765 ORTHO05D005900 1.4e-06 56.6 112 33.9
Glyma.12G091700 Glycine max HOM05D004765 ORTHO05D005900 1.4e-06 56.6 112 34.8
Nn6g34806 Nelumbo nucifera HOM05D004765 ORTHO05D005900 1.4e-06 56.6 107 33.6
vmacro14340 Vaccinium macrocarpon HOM05D004765 ORTHO05D005900 1.4e-06 56.6 112 36.6
Cfa009988 Carpinus fangiana HOM05D004765 ORTHO05D005900 1.9e-06 56.2 107 35.5
CiPaw.14G098100 Carya illinoinensis HOM05D004765 ORTHO05D005900 2.4e-06 55.8 107 34.6
Peaxi162Scf00224g00217 Petunia axillaris HOM05D004765 ORTHO05D005900 2.4e-06 55.8 112 33.9
THA.LOC104814781 Tarenaya hassleriana HOM05D004765 ORTHO05D005900 2.4e-06 55.8 107 33.6
TWI31G1403 Tripterygium wilfordii HOM05D004765 ORTHO05D005900 2.4e-06 55.8 103 35.0
HanXRQChr11g0343661 Helianthus annuus HOM05D004765 ORTHO05D005900 3.2e-06 55.5 108 38.9
Sopen11g027390 Solanum pennellii HOM05D004765 ORTHO05D005900 3.2e-06 55.5 112 33.9
CSS0022046 Camellia sinensis var. sinensis HOM05D004765 ORTHO05D005900 4.2e-06 55.1 112 34.8
Cpa.g.sc195.23 Carica papaya HOM05D004765 ORTHO05D005900 4.2e-06 55.1 107 34.6
COL.COLO4_34006 Corchorus olitorius HOM05D004765 ORTHO05D005900 4.2e-06 55.1 112 34.8
Phvul.011G096100 Phaseolus vulgaris HOM05D004765 ORTHO05D005900 4.2e-06 55.1 112 33.0
Ca_19442_v3 Cicer arietinum L. HOM05D004765 ORTHO05D005900 5.5e-06 54.7 110 36.4
Sc12g0004610 Simmondsia chinensis HOM05D004765 ORTHO05D005900 5.5e-06 54.7 113 35.4
Sc12g0004660 Simmondsia chinensis HOM05D004765 ORTHO05D005900 5.5e-06 54.7 113 35.4
Thecc.09G278900 Theobroma cacao HOM05D004765 ORTHO05D005900 5.5e-06 54.7 112 34.8
Zm00001eb198750 Zea mays HOM05D004765 ORTHO05D005900 5.5e-06 54.7 108 35.2
CANSAT54G2137 Cannabis sativa HOM05D004765 ORTHO05D005900 7.1e-06 54.3 103 35.9
AUR62020257 Chenopodium quinoa HOM05D004765 ORTHO05D005900 9.3e-06 53.9 112 32.1
PGR119G0504 Punica granatum HOM05D004765 ORTHO05D005900 9.3e-06 53.9 107 33.6
Solyc11g068670.2 Solanum lycopersicum HOM05D004765 ORTHO05D005900 9.3e-06 53.9 108 35.2


User provided reference genes

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