Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 2.3e-128 462.2 230 100.0
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 5.1e-96 354.8 235 77.4
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 4.4e-55 218.8 168 67.3
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 1.7e-54 216.9 182 61.5
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 1.1e-53 214.2 152 68.4
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 1.4e-53 213.8 171 62.6
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 1.4e-53 213.8 152 68.4
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 2.4e-53 213.0 164 64.6
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 3.2e-53 212.6 164 64.6
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 4.1e-53 212.2 164 64.6
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 7.0e-53 211.5 170 62.9
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 1.2e-52 210.7 165 66.1
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 1.2e-52 210.7 178 59.6
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 1.6e-52 210.3 213 54.0
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 2.7e-52 209.5 157 66.2
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 2.7e-52 209.5 157 66.2
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 2.7e-52 209.5 153 66.0
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 4.6e-52 208.8 187 57.8
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 6.0e-52 208.4 153 66.7
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 6.0e-52 208.4 166 63.3
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 7.8e-52 208.0 154 67.5
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 1.0e-51 207.6 153 66.7
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 1.0e-51 207.6 153 66.7
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 1.0e-51 207.6 175 60.6
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 1.7e-51 206.8 185 58.9
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 1.7e-51 206.8 153 68.6
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 2.3e-51 206.5 162 63.0
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 2.3e-51 206.5 187 57.2
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 2.3e-51 206.5 175 58.9
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 3.0e-51 206.1 151 66.9
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 3.0e-51 206.1 167 61.7
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 3.9e-51 205.7 153 66.0
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 5.0e-51 205.3 153 66.0
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 5.0e-51 205.3 185 58.4
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 5.0e-51 205.3 127 75.6
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 8.6e-51 204.5 227 52.4
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 1.1e-50 204.1 133 72.9
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 1.1e-50 204.1 134 72.4
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 1.1e-50 204.1 156 65.4
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 1.1e-50 204.1 165 61.2
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 1.5e-50 203.8 133 73.7
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 1.5e-50 203.8 163 64.4
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 1.9e-50 203.4 162 62.3
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 1.9e-50 203.4 196 55.6
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 1.9e-50 203.4 150 67.3
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 1.9e-50 203.4 179 57.0
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 2.5e-50 203.0 150 68.7
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 3.3e-50 202.6 153 68.0
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 3.3e-50 202.6 152 66.4
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 4.3e-50 202.2 150 66.7
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 4.3e-50 202.2 150 66.7
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 4.3e-50 202.2 150 66.7
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 4.3e-50 202.2 150 66.7
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 4.3e-50 202.2 169 58.6
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 4.3e-50 202.2 167 60.5
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 5.6e-50 201.8 152 65.8
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 7.3e-50 201.4 171 59.1
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 9.5e-50 201.1 138 71.0
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 1.2e-49 200.7 151 65.6
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 1.2e-49 200.7 153 64.1
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 1.2e-49 200.7 150 66.7
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 1.2e-49 200.7 172 60.5
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 1.2e-49 200.7 165 60.0
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 2.1e-49 199.9 153 62.7
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 2.1e-49 199.9 131 72.5
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 2.1e-49 199.9 133 72.2
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 2.1e-49 199.9 127 75.6
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 2.8e-49 199.5 137 70.1
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 2.8e-49 199.5 137 70.1
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 3.6e-49 199.1 222 50.0
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 3.6e-49 199.1 153 65.4
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 4.7e-49 198.7 127 74.8
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 4.7e-49 198.7 127 74.8
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 8.0e-49 198.0 130 73.1
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 8.0e-49 198.0 137 69.3
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 8.0e-49 198.0 168 61.3
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.4e-48 197.2 173 57.2
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.4e-48 197.2 197 52.8
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 1.4e-48 197.2 197 52.8
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 1.8e-48 196.8 139 69.8
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 2.0e-47 193.4 165 57.6
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 2.6e-47 193.0 167 59.3
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 7.5e-47 191.4 165 60.0
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 2.2e-46 189.9 150 61.3
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 2.2e-46 189.9 150 61.3
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 1.3e-43 180.6 153 59.5
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 8.6e-43 177.9 150 61.3
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 1.5e-42 177.2 127 66.9
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 1.2e-41 174.1 136 66.2
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 8.1e-41 171.4 139 64.0
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 1.4e-40 170.6 131 64.1
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.5e-39 167.2 210 49.0
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 1.7e-38 163.7 194 47.4
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 2.2e-38 163.3 153 55.6
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 4.9e-38 162.2 113 69.0
Pp3c14_17250 Physcomitrium patens HOM05D007059 ORTHO05D009155 4.1e-37 159.1 133 67.7
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 1.1e-32 144.4 125 56.8
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 1.3e-27 127.5 147 51.0
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 8.7e-27 124.8 167 41.9
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 2.4e-21 106.7 153 42.5
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 3.5e-20 102.8 156 44.2
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 2.5e-18 96.7 189 38.6
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 4.3e-18 95.9 67 67.2
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 1.6e-17 94.0 83 60.2
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 1.1e-16 91.3 63 68.3
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 1.4e-16 90.9 188 32.4
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 5.3e-16 89.0 56 67.9
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 1.5e-15 87.4 84 54.8
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 1.6e-12 77.4 113 34.5
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 1.4e-08 64.3 101 33.7
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 2.0e-07 60.5 45 66.7
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 1.7e-06 57.4 45 64.4


User provided reference genes

Program Settings