Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 9.3e-127 456.8 222 100.0
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 8.6e-56 221.1 215 50.7
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 6.1e-54 214.9 214 48.1
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 1.4e-53 213.8 210 47.1
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 3.4e-52 209.1 212 47.2
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 1.7e-51 206.8 216 47.2
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.2e-51 206.5 214 44.9
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 1.1e-50 204.1 208 46.6
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 1.1e-50 204.1 208 46.6
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 4.1e-50 202.2 212 45.3
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 5.4e-50 201.8 214 46.7
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 5.4e-50 201.8 209 46.4
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 9.2e-50 201.1 210 45.7
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 9.2e-50 201.1 211 47.4
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 9.2e-50 201.1 210 46.2
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 9.2e-50 201.1 210 45.2
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.6e-49 200.3 212 47.6
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 1.6e-49 200.3 211 47.9
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 2.0e-49 199.9 212 47.6
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 2.0e-49 199.9 216 45.8
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 2.7e-49 199.5 212 47.6
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 3.5e-49 199.1 218 45.9
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 3.5e-49 199.1 206 46.1
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 3.5e-49 199.1 208 46.6
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 5.9e-49 198.4 212 47.2
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 1.0e-48 197.6 211 46.4
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 1.0e-48 197.6 211 44.5
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 1.3e-48 197.2 208 46.2
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 1.7e-48 196.8 212 45.3
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 1.7e-48 196.8 213 45.5
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 2.3e-48 196.4 216 45.4
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 2.3e-48 196.4 211 44.1
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 3.0e-48 196.1 206 50.0
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 3.9e-48 195.7 208 45.2
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 3.9e-48 195.7 213 44.1
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 6.6e-48 194.9 211 46.0
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 6.6e-48 194.9 208 43.8
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 8.6e-48 194.5 208 43.8
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 8.6e-48 194.5 208 43.8
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 8.6e-48 194.5 207 46.4
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 8.6e-48 194.5 208 44.2
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 1.1e-47 194.1 217 43.8
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 1.5e-47 193.7 217 42.4
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 1.5e-47 193.7 208 47.1
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 1.5e-47 193.7 208 45.7
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 1.9e-47 193.4 217 42.9
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.9e-47 193.4 208 43.8
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 1.9e-47 193.4 217 43.3
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 2.5e-47 193.0 209 45.9
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 2.5e-47 193.0 208 43.3
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 3.3e-47 192.6 208 45.7
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 3.3e-47 192.6 208 42.8
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 3.3e-47 192.6 208 42.8
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 3.3e-47 192.6 208 42.8
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 3.3e-47 192.6 208 46.2
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 3.3e-47 192.6 218 42.7
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 4.3e-47 192.2 217 45.2
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 4.3e-47 192.2 217 41.9
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 4.3e-47 192.2 212 46.7
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 7.3e-47 191.4 208 43.3
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 1.2e-46 190.7 217 44.2
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 1.2e-46 190.7 214 45.3
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 1.6e-46 190.3 208 41.3
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 1.6e-46 190.3 218 45.4
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 2.1e-46 189.9 219 43.8
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 3.6e-46 189.1 217 42.9
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 3.6e-46 189.1 208 46.2
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 3.6e-46 189.1 213 46.0
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 1.0e-45 187.6 217 41.9
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 1.8e-45 186.8 208 41.3
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 1.8e-45 186.8 208 45.7
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 4.0e-45 185.7 212 42.5
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 5.2e-45 185.3 208 41.8
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 5.2e-45 185.3 208 44.7
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 5.2e-45 185.3 211 44.1
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 6.8e-45 184.9 208 44.2
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 8.9e-45 184.5 209 43.5
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 1.2e-44 184.1 209 42.1
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 1.2e-44 184.1 211 44.1
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 1.5e-44 183.7 217 42.4
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.5e-44 183.7 208 40.4
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 4.4e-44 182.2 224 42.4
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 4.4e-44 182.2 224 42.0
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 9.8e-44 181.0 201 45.3
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 2.9e-43 179.5 225 41.3
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 6.4e-43 178.3 213 42.7
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 6.4e-43 178.3 211 43.1
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 1.1e-42 177.6 208 42.3
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 1.4e-42 177.2 213 42.3
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 3.2e-42 176.0 216 43.1
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 7.0e-42 174.9 216 42.6
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 2.0e-41 173.3 208 42.8
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 3.5e-41 172.6 172 48.8
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 3.5e-41 172.6 210 41.0
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 2.3e-40 169.9 172 48.3
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 2.3e-40 169.9 269 37.2
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 3.0e-40 169.5 209 39.7
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 3.9e-40 169.1 184 45.1
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 9.5e-39 164.5 210 40.0
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 8.9e-37 157.9 249 33.7
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 2.6e-36 156.4 180 42.2
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 9.8e-36 154.5 172 43.6
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 4.1e-34 149.1 180 43.3
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 2.1e-33 146.7 199 41.7
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 4.6e-33 145.6 213 36.2
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 9.5e-31 137.9 207 38.2
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 2.1e-30 136.7 208 34.6
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 8.9e-29 131.3 214 35.0
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 2.0e-28 130.2 201 35.8
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 9.9e-28 127.9 144 41.7
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 9.9e-28 127.9 200 36.5
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 9.9e-28 127.9 150 42.0
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 1.4e-26 124.0 146 41.1
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 1.6e-25 120.6 136 42.6
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 1.0e-24 117.9 165 36.4
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 3.3e-23 112.8 220 32.7
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 2.4e-21 106.7 112 46.4
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 4.0e-21 105.9 224 27.2
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 3.2e-18 96.3 160 34.4
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 1.3e-16 90.9 134 39.6
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 4.3e-15 85.9 87 43.7
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 9.9e-12 74.7 104 33.7
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 3.0e-08 63.2 93 34.4


User provided reference genes

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