Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_14710 Physcomitrium patens HOM05D004686 ORTHO05D005988 1.5e-138 496.1 249 100.0
Pp3c3_25460 Physcomitrium patens HOM05D004686 ORTHO05D005988 1.6e-111 406.4 247 82.2
Mapoly0010s0052 Marchantia polymorpha HOM05D004686 ORTHO05D005988 2.0e-69 266.5 184 71.2
Thhalv10021272m.g Eutrema salsugineum HOM05D004686 ORTHO05D005988 4.4e-69 265.4 197 67.5
Sp3g18970 Schrenkiella parvula HOM05D004686 ORTHO05D005988 5.8e-69 265.0 192 69.3
AT3G20970 Arabidopsis thaliana HOM05D004686 ORTHO05D005988 9.9e-69 264.2 213 63.4
BcaC05g28207 Brassica carinata HOM05D004686 ORTHO05D005988 9.9e-69 264.2 236 60.2
C05p43110 Brassica napus HOM05D004686 ORTHO05D005988 9.9e-69 264.2 192 70.3
BolC5t33041H Brassica oleracea HOM05D004686 ORTHO05D005988 1.3e-68 263.8 192 69.3
Carub.0003s2093 Capsella rubella HOM05D004686 ORTHO05D005988 1.3e-68 263.8 213 63.8
Thecc.10G107700 Theobroma cacao HOM05D004686 ORTHO05D005988 1.7e-68 263.5 221 62.4
BcaB06g26171 Brassica carinata HOM05D004686 ORTHO05D005988 2.2e-68 263.1 174 73.0
Haze_14265 Corylus avellana HOM05D004686 ORTHO05D005988 2.9e-68 262.7 218 65.6
Os05g0155300 Oryza sativa ssp. japonica HOM05D004686 ORTHO05D005988 2.9e-68 262.7 181 71.8
A05p27770 Brassica napus HOM05D004686 ORTHO05D005988 3.8e-68 262.3 174 72.4
BraA05t21664Z Brassica rapa HOM05D004686 ORTHO05D005988 3.8e-68 262.3 174 72.4
QL04p044815 Quercus lobata HOM05D004686 ORTHO05D005988 3.8e-68 262.3 178 72.5
Actinidia34718 Actinidia chinensis HOM05D004686 ORTHO05D005988 4.9e-68 261.9 195 67.7
Ciclev10032367m.g Citrus clementina HOM05D004686 ORTHO05D005988 6.4e-68 261.5 196 66.8
Dinv02032 Davidia involucrata HOM05D004686 ORTHO05D005988 6.4e-68 261.5 243 59.3
Cfa007809 Carpinus fangiana HOM05D004686 ORTHO05D005988 1.1e-67 260.8 193 70.5
Dinv11852 Davidia involucrata HOM05D004686 ORTHO05D005988 1.1e-67 260.8 243 58.8
TAR633G2407 Trochodendron aralioides HOM05D004686 ORTHO05D005988 1.1e-67 260.8 196 66.3
arahy.Tifrunner.gnm1.ann1.GZ7TSK Arachis hypogaea HOM05D004686 ORTHO05D005988 1.4e-67 260.4 192 67.7
arahy.Tifrunner.gnm1.ann1.R2EQ4U Arachis hypogaea HOM05D004686 ORTHO05D005988 1.4e-67 260.4 192 67.7
CARHR096860 Cardamine hirsuta HOM05D004686 ORTHO05D005988 1.4e-67 260.4 174 71.8
Dinv09596 Davidia involucrata HOM05D004686 ORTHO05D005988 1.4e-67 260.4 198 66.2
Gohir.A05G287600 Gossypium hirsutum HOM05D004686 ORTHO05D005988 1.4e-67 260.4 219 62.1
Gohir.D05G288800 Gossypium hirsutum HOM05D004686 ORTHO05D005988 1.4e-67 260.4 219 62.6
Gorai.009G303900 Gossypium raimondii HOM05D004686 ORTHO05D005988 1.9e-67 260.0 219 62.6
HanXRQChr07g0194231 Helianthus annuus HOM05D004686 ORTHO05D005988 1.9e-67 260.0 172 73.8
Rhsim09G0142900 Rhododendron simsii HOM05D004686 ORTHO05D005988 2.4e-67 259.6 221 60.6
Rhsim03G0100800 Rhododendron simsii HOM05D004686 ORTHO05D005988 4.2e-67 258.8 172 72.7
Zm00001eb346110 Zea mays HOM05D004686 ORTHO05D005988 4.2e-67 258.8 174 72.4
Aa31LG10G3560 Aethionema arabicum HOM05D004686 ORTHO05D005988 5.4e-67 258.5 174 74.1
Aqoxy3G00701 Aquilegia oxysepala HOM05D004686 ORTHO05D005988 7.1e-67 258.1 187 70.1
Duzib128G0508 Durio zibethinus HOM05D004686 ORTHO05D005988 7.1e-67 258.1 223 61.4
THA.LOC104817910 Tarenaya hassleriana HOM05D004686 ORTHO05D005988 9.3e-67 257.7 225 60.9
MELO3C019892.2 Cucumis melo HOM05D004686 ORTHO05D005988 1.2e-66 257.3 194 68.6
Thhalv10011711m.g Eutrema salsugineum HOM05D004686 ORTHO05D005988 1.2e-66 257.3 174 71.3
THA.LOC104816877 Tarenaya hassleriana HOM05D004686 ORTHO05D005988 1.2e-66 257.3 172 72.1
TAR636G3245 Trochodendron aralioides HOM05D004686 ORTHO05D005988 1.2e-66 257.3 190 67.9
BcaB07g33585 Brassica carinata HOM05D004686 ORTHO05D005988 1.6e-66 256.9 174 70.7
CANSAT56G3264 Cannabis sativa HOM05D004686 ORTHO05D005988 1.6e-66 256.9 201 65.2
HanXRQChr11g0342241 Helianthus annuus HOM05D004686 ORTHO05D005988 1.6e-66 256.9 172 72.7
RcHm_v2.0_Chr2g0118911 Rosa chinensis HOM05D004686 ORTHO05D005988 1.6e-66 256.9 172 72.7
MD04G1028700 Malus domestica HOM05D004686 ORTHO05D005988 2.1e-66 256.5 192 67.2
Nn5g28600 Nelumbo nucifera HOM05D004686 ORTHO05D005988 2.1e-66 256.5 196 66.8
Sed0018572 Sechium edule HOM05D004686 ORTHO05D005988 2.1e-66 256.5 194 68.0
CsaV3_6G004170 Cucumis sativus L. HOM05D004686 ORTHO05D005988 2.7e-66 256.1 176 72.7
SMO119G0422 Selaginella moellendorffii HOM05D004686 ORTHO05D005988 2.7e-66 256.1 171 73.1
Aqoxy2G01234 Aquilegia oxysepala HOM05D004686 ORTHO05D005988 3.5e-66 255.8 174 72.4
BcaC08g43308 Brassica carinata HOM05D004686 ORTHO05D005988 3.5e-66 255.8 200 64.0
BolC6t35767H Brassica oleracea HOM05D004686 ORTHO05D005988 3.5e-66 255.8 188 66.5
Lj2C31G19 Lonicera japonica HOM05D004686 ORTHO05D005988 4.6e-66 255.4 172 70.9
C06p06550 Brassica napus HOM05D004686 ORTHO05D005988 6.0e-66 255.0 173 70.5
Nitab4.5_0001437g0190 Nicotiana tabacum HOM05D004686 ORTHO05D005988 6.0e-66 255.0 235 57.0
Manes.10G058150 Manihot esculenta HOM05D004686 ORTHO05D005988 7.8e-66 254.6 197 67.5
Sp1g38060 Schrenkiella parvula HOM05D004686 ORTHO05D005988 7.8e-66 254.6 175 69.7
Ah.12g062170 Amaranthus hybridus HOM05D004686 ORTHO05D005988 1.0e-65 254.2 173 72.3
BraA06t23459Z Brassica rapa HOM05D004686 ORTHO05D005988 1.0e-65 254.2 173 69.9
CiPaw.13G038400 Carya illinoinensis HOM05D004686 ORTHO05D005988 1.0e-65 254.2 178 71.3
AUR62037089 Chenopodium quinoa HOM05D004686 ORTHO05D005988 1.0e-65 254.2 172 73.3
FvH4_1g23510 Fragaria vesca HOM05D004686 ORTHO05D005988 1.3e-65 253.8 172 72.1
ATR0820G097 Amborella trichopoda HOM05D004686 ORTHO05D005988 1.7e-65 253.4 172 72.1
ECA238G0678 Erigeron canadensis HOM05D004686 ORTHO05D005988 1.7e-65 253.4 172 72.7
Lsat_1_v5_gn_2_104981 Lactuca sativa HOM05D004686 ORTHO05D005988 1.7e-65 253.4 172 71.5
Nitab4.5_0003774g0030 Nicotiana tabacum HOM05D004686 ORTHO05D005988 1.7e-65 253.4 244 54.9
MSTRG.9090 Avicennia marina HOM05D004686 ORTHO05D005988 2.3e-65 253.1 189 66.1
Prupe.2G079800 Prunus persica HOM05D004686 ORTHO05D005988 2.3e-65 253.1 174 70.1
Cpa.g.sc563.1 Carica papaya HOM05D004686 ORTHO05D005988 3.0e-65 252.7 174 71.3
ClCG08G008200 Citrullus lanatus HOM05D004686 ORTHO05D005988 3.0e-65 252.7 172 72.1
Peaxi162Scf00173g00068 Petunia axillaris HOM05D004686 ORTHO05D005988 3.0e-65 252.7 188 67.6
A06p02520 Brassica napus HOM05D004686 ORTHO05D005988 3.9e-65 252.3 173 69.4
PGR142G2157 Punica granatum HOM05D004686 ORTHO05D005988 3.9e-65 252.3 172 70.3
Sc20g0001200 Simmondsia chinensis HOM05D004686 ORTHO05D005988 3.9e-65 252.3 193 65.8
TWI63G0038 Tripterygium wilfordii HOM05D004686 ORTHO05D005988 5.1e-65 251.9 184 69.0
Sabra10G0185800 Salix brachista HOM05D001373 ORTHO05D005988 8.7e-65 251.1 197 64.0
AL1G59240 Arabidopsis lyrata HOM05D004686 ORTHO05D005988 1.1e-64 250.8 173 69.9
Carub.0001s4026 Capsella rubella HOM05D004686 ORTHO05D005988 1.1e-64 250.8 172 70.3
SalBow6G2690 Salvia bowleyana HOM05D004686 ORTHO05D005988 1.1e-64 250.8 172 69.8
GSVIVG01011272001 Vitis vinifera HOM05D004686 ORTHO05D005988 1.1e-64 250.8 168 70.8
Eucgr.G02697 Eucalyptus grandis HOM05D004686 ORTHO05D005988 1.5e-64 250.4 173 71.1
Atru.chr12.1003 Acer truncatum HOM05D004686 ORTHO05D005988 1.9e-64 250.0 172 70.9
AT1G51390 Arabidopsis thaliana HOM05D004686 ORTHO05D005988 1.9e-64 250.0 172 69.8
Medtr1g069215 Medicago truncatula HOM05D004686 ORTHO05D005988 1.9e-64 250.0 192 64.6
Solyc11g007120.2 Solanum lycopersicum HOM05D004686 ORTHO05D005988 2.5e-64 249.6 174 69.0
Sopen11g003040 Solanum pennellii HOM05D004686 ORTHO05D005988 2.5e-64 249.6 174 69.0
unitig_0.g763 Utricularia gibba HOM05D004686 ORTHO05D005988 2.5e-64 249.6 172 68.6
CARHR041540 Cardamine hirsuta HOM05D004686 ORTHO05D005988 3.3e-64 249.2 172 69.2
Migut.F00905 Erythranthe guttata HOM05D004686 ORTHO05D005988 3.3e-64 249.2 195 63.6
TPR.G10412 Trifolium pratense HOM05D004686 ORTHO05D005988 3.3e-64 249.2 179 67.0
EL10Ac5g11629 Beta vulgaris HOM05D004686 ORTHO05D005988 4.3e-64 248.8 172 71.5
CAN.G730.34 Capsicum annuum HOM05D004686 ORTHO05D005988 4.3e-64 248.8 174 69.0
PSO339G5017 Papaver somniferum HOM05D004686 ORTHO05D005988 4.3e-64 248.8 174 69.5
Potri.010G237400 Populus trichocarpa HOM05D004686 ORTHO05D005988 4.3e-64 248.8 172 69.2
Atru.chr4.937 Acer truncatum HOM05D004686 ORTHO05D005988 5.6e-64 248.4 177 68.4
Medtr3g073070 Medicago truncatula HOM05D004686 ORTHO05D005988 5.6e-64 248.4 179 66.5
Psat6g239000 Pisum sativum HOM05D004686 ORTHO05D005988 5.6e-64 248.4 172 68.0
arahy.Tifrunner.gnm1.ann1.XFSN2Q Arachis hypogaea HOM05D004686 ORTHO05D005988 7.3e-64 248.1 172 69.8
Glyma.20G242200 Glycine max HOM05D004686 ORTHO05D005988 7.3e-64 248.1 172 69.8
PSO384G4844 Papaver somniferum HOM05D004686 ORTHO05D005988 9.6e-64 247.7 174 69.0
DCAR_019313 Daucus carota HOM05D004686 ORTHO05D005988 1.3e-63 247.3 168 72.0
PGSC0003DMG400019464 Solanum tuberosum HOM05D004686 ORTHO05D005988 1.6e-63 246.9 236 56.4
VMungo0720G1764 Vigna mungo HOM05D004686 ORTHO05D005988 1.6e-63 246.9 172 69.2
Phvul.007G008000 Phaseolus vulgaris HOM05D004686 ORTHO05D005988 2.1e-63 246.5 172 68.6
Cc02_g09830 Coffea canephora HOM05D004686 ORTHO05D005988 2.8e-63 246.1 172 70.9
Lj5g0008296 Lotus japonicus HOM05D004686 ORTHO05D005988 2.8e-63 246.1 194 63.9
HPP92_001974 Vanilla planifolia HOM05D004686 ORTHO05D005988 6.2e-63 245.0 172 69.2
CBR_g48305 Chara braunii HOM05D004686 ORTHO05D005988 8.1e-63 244.6 171 69.6
Lalb_Chr06g0164101 Lupinus albus HOM05D004686 ORTHO05D005988 1.1e-62 244.2 174 69.5
SGA_v2.0_scaffold62G21346 Striga asiatica HOM05D004686 ORTHO05D005988 1.1e-62 244.2 172 69.2
arahy.Tifrunner.gnm1.ann1.N4KLNP Arachis hypogaea HOM05D004686 ORTHO05D005988 1.8e-62 243.4 172 68.6
Ca_10211_v3 Cicer arietinum L. HOM05D000283 ORTHO05D005391 1.8e-62 243.4 172 68.6
FAN19G3154 Fragaria x ananassa HOM05D004686 ORTHO05D005988 1.8e-62 243.4 188 66.0
FAN26G2913 Fragaria x ananassa HOM05D004686 ORTHO05D005988 4.0e-62 242.3 188 66.0
AagrBONN_evm.TU.Sc2ySwM_362.2258 Anthoceros agrestis HOM05D004686 ORTHO05D005988 5.3e-62 241.9 182 68.7
FAN28G2368 Fragaria x ananassa HOM05D004686 ORTHO05D005988 9.0e-62 241.1 188 65.4
Oeu030507.2 Olea europaea HOM05D004686 ORTHO05D005988 4.9e-60 235.3 207 59.4
SEGI_01464 Sequoiadendron giganteum HOM05D004686 ORTHO05D005988 1.4e-59 233.8 154 74.0
Sabra08G0014900 Salix brachista HOM05D004686 ORTHO05D005988 1.9e-59 233.4 166 66.9
Migut.F01616 Erythranthe guttata HOM05D004686 ORTHO05D005988 2.3e-57 226.5 171 64.9
AagrBONN_evm.TU.Sc2ySwM_117.1090 Anthoceros agrestis HOM05D004686 ORTHO05D005988 1.9e-56 223.4 146 76.7
BcaC05g26273 Brassica carinata HOM05D004686 ORTHO05D005988 1.9e-56 223.4 157 69.4
Oeu030509.1 Olea europaea HOM05D004686 ORTHO05D005988 3.1e-54 216.1 257 47.9
MCO10G342 Micromonas commoda HOM05D004686 ORTHO05D005988 8.4e-52 208.0 172 59.9
Cre12.g504150 Chlamydomonas reinhardtii HOM05D004686 ORTHO05D005988 1.9e-51 206.8 199 52.8
PRCOL_00006553 Prasinoderma coloniale HOM05D004686 ORTHO05D005988 4.2e-51 205.7 170 60.0
C07p01900 Brassica napus HOM05D004686 ORTHO05D005988 4.3e-48 195.7 145 67.6
BcaC06g36644 Brassica carinata HOM05D004686 ORTHO05D005988 3.7e-47 192.6 168 61.3
BolC7t40596H Brassica oleracea HOM05D004686 ORTHO05D005988 3.7e-47 192.6 168 61.3
C05p22850 Brassica napus HOM05D004686 ORTHO05D005988 4.0e-46 189.1 153 63.4
CDE08G1288 Ceratophyllum demersum HOM05D004686 ORTHO05D005988 2.6e-45 186.4 143 65.7
AagrBONN_evm.TU.Sc2ySwM_117.3971 Anthoceros agrestis HOM05D004686 ORTHO05D005988 7.6e-45 184.9 129 73.6
Potri.008G022000 Populus trichocarpa HOM05D004686 ORTHO05D005988 2.5e-43 179.9 134 62.7
AUR62038365 Chenopodium quinoa HOM05D004686 ORTHO05D005988 7.9e-42 174.9 119 73.1
Haze_26891 Corylus avellana HOM05D004686 ORTHO05D005988 1.6e-39 167.2 171 49.1
AagrBONN_evm.TU.Sc2ySwM_117.3974 Anthoceros agrestis HOM05D004686 ORTHO05D005988 1.1e-32 144.4 147 59.2
Cfa026205 Carpinus fangiana HOM05D004686 ORTHO05D005988 7.4e-32 141.7 189 43.9
CSS0027430 Camellia sinensis var. sinensis HOM05D004686 ORTHO05D005988 2.2e-31 140.2 93 71.0
Rhsim03G0100900 Rhododendron simsii HOM05D004686 ORTHO05D005988 4.7e-26 122.5 178 43.8
CDE06G1789 Ceratophyllum demersum HOM05D004686 ORTHO05D005988 2.4e-22 110.2 171 42.1
Nitab4.5_0001437g0120 Nicotiana tabacum HOM05D004686 ORTHO05D005988 1.2e-21 107.8 105 50.5
arahy.Tifrunner.gnm1.ann1.0744GE Arachis hypogaea HOM05D000145 ORTHO05D000115 2.0e-21 107.1 61 82.0
arahy.Tifrunner.gnm1.ann1.Z3LWFH Arachis hypogaea HOM05D000145 ORTHO05D000115 2.2e-20 103.6 62 77.4
Psat3g105760 Pisum sativum HOM05D004686 ORTHO05D005988 1.4e-19 100.9 101 55.4
AL3G34930 Arabidopsis lyrata HOM05D004686 ORTHO05D005988 9.4e-19 98.2 53 86.8
Carub.0162s0001 Capsella rubella HOM05D004686 ORTHO05D005988 4.7e-18 95.9 61 75.4
Actinidia31100 Actinidia chinensis HOM05D004686 ORTHO05D005988 6.1e-18 95.5 124 48.4
Psat7g160920 Pisum sativum HOM05D004686 ORTHO05D005988 3.9e-17 92.8 136 40.4
C09p31040 Brassica napus HOM05D004686 ORTHO05D027932 3.1e-14 83.2 67 59.7
BolC9t55963H Brassica oleracea HOM05D004686 ORTHO05D027932 3.1e-14 83.2 67 59.7
C05p35820 Brassica napus HOM05D004686 ORTHO05D027932 4.5e-13 79.3 63 58.7
BolC5t32300H Brassica oleracea HOM05D004686 ORTHO05D027932 4.5e-13 79.3 63 58.7
SHI21636 Sapria himalayana HOM05D004686 ORTHO05D005988 3.6e-10 69.7 83 37.3
BcaB02g10852 Brassica carinata HOM05D004686 ORTHO05D001378 1.4e-09 67.8 47 66.0
BcaB03g16327 Brassica carinata HOM05D002341 ORTHO05D039489 8.8e-09 65.1 61 55.7
CSS0011091 Camellia sinensis var. sinensis HOM05D004686 ORTHO05D005988 1.1e-06 58.2 30 90.0


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