Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 1.7e-288 995.3 511 100.0
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 1.9e-98 364.0 528 41.7
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 1.2e-81 308.1 491 36.9
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 3.6e-81 306.6 519 33.3
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 3.3e-71 273.5 533 33.6
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 4.4e-71 273.1 519 34.5
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 5.9e-68 262.7 526 34.0
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 5.9e-68 262.7 524 35.1
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 2.9e-67 260.4 531 34.3
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 3.8e-67 260.0 529 33.1
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 8.5e-67 258.8 532 33.5
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 3.2e-66 256.9 479 36.1
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 5.5e-66 256.1 533 32.6
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 3.6e-65 253.4 537 32.0
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 6.1e-65 252.7 531 33.3
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 8.0e-65 252.3 533 32.3
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 1.0e-64 251.9 535 35.1
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 1.4e-64 251.5 533 31.3
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 1.8e-64 251.1 532 33.8
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 2.3e-64 250.8 533 31.9
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 2.3e-64 250.8 533 31.9
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 4.0e-64 250.0 532 32.7
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 4.0e-64 250.0 531 32.8
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 1.5e-63 248.1 541 33.5
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 1.5e-63 248.1 528 33.1
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 4.4e-63 246.5 534 29.8
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 5.7e-63 246.1 533 32.3
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 7.5e-63 245.7 530 32.8
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 9.8e-63 245.4 539 32.8
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 1.3e-62 245.0 532 30.6
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 1.3e-62 245.0 514 32.7
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 2.2e-62 244.2 524 32.4
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 2.8e-62 243.8 523 33.7
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 2.8e-62 243.8 525 34.3
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 8.3e-62 242.3 532 32.9
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 8.3e-62 242.3 530 30.8
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 1.4e-61 241.5 529 31.9
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 1.8e-61 241.1 530 31.7
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 2.4e-61 240.7 535 32.3
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 2.4e-61 240.7 514 33.9
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 3.1e-61 240.4 495 32.1
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 4.1e-61 240.0 532 30.8
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 9.1e-61 238.8 514 31.5
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 9.1e-61 238.8 529 32.7
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.6e-60 238.0 530 32.8
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 2.0e-60 237.7 530 31.9
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 3.5e-60 236.9 466 33.3
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 4.5e-60 236.5 530 32.5
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 4.5e-60 236.5 428 33.6
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 4.5e-60 236.5 532 32.3
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 5.9e-60 236.1 424 32.8
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 5.9e-60 236.1 508 31.3
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.3e-59 235.0 541 31.8
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 1.3e-59 235.0 532 35.2
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 1.3e-59 235.0 531 33.1
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 1.7e-59 234.6 527 32.4
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 2.9e-59 233.8 428 32.2
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 3.8e-59 233.4 512 34.2
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 8.6e-59 232.3 532 33.3
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 8.6e-59 232.3 517 34.4
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 1.1e-58 231.9 533 32.1
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 1.9e-58 231.1 529 30.8
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 5.5e-58 229.6 535 33.8
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 1.6e-57 228.0 543 30.9
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 2.8e-57 227.3 530 32.1
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 2.8e-57 227.3 523 31.4
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 3.6e-57 226.9 487 33.7
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 6.1e-57 226.1 544 29.2
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.0e-56 225.3 543 30.8
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 6.8e-56 222.6 380 35.8
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 8.9e-56 222.2 488 32.6
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 1.2e-55 221.9 532 32.1
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 1.5e-55 221.5 539 31.0
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 1.5e-55 221.5 514 33.3
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 2.6e-55 220.7 535 31.4
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 2.6e-55 220.7 539 29.9
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 5.7e-55 219.5 503 30.4
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 5.7e-55 219.5 556 30.2
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 9.8e-55 218.8 359 34.5
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.3e-54 218.4 538 30.3
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 3.7e-54 216.9 509 31.4
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 1.1e-53 215.3 350 35.4
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 1.8e-53 214.5 531 31.6
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 3.1e-53 213.8 401 35.7
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 3.1e-53 213.8 509 30.3
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 4.1e-53 213.4 535 30.7
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 7.0e-53 212.6 531 31.6
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 1.6e-52 211.5 526 29.3
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 4.5e-52 209.9 552 30.4
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 7.8e-52 209.1 537 30.5
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 1.0e-51 208.8 510 31.8
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.3e-51 208.4 522 31.4
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 1.7e-51 208.0 502 28.9
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.1e-50 205.3 433 31.6
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 5.6e-50 203.0 442 33.0
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 7.3e-50 202.6 399 34.8
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 8.0e-49 199.1 357 35.0
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 4.0e-48 196.8 519 28.7
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.5e-47 194.9 531 30.3
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 5.8e-47 193.0 522 28.2
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 2.4e-45 187.6 503 28.6
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 9.2e-45 185.7 502 28.7
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 6.0e-44 183.0 526 29.7
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 3.1e-40 170.6 267 35.2
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 8.9e-40 169.1 222 40.1
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 1.5e-39 168.3 159 46.5
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 1.5e-39 168.3 159 46.5
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 3.4e-39 167.2 151 51.0
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 1.3e-38 165.2 178 47.2
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 2.9e-38 164.1 228 38.6
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 5.1e-27 126.7 343 31.8
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 1.9e-26 124.8 350 29.7
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 6.2e-25 119.8 226 33.6
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 2.7e-12 77.8 154 35.1
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 8.7e-11 72.8 160 26.9
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 8.7e-11 72.8 154 31.2


User provided reference genes

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