Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 2.0e-118 429.1 218 100.0
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 4.6e-78 295.0 234 71.4
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 1.1e-50 204.1 192 56.2
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 6.0e-46 188.3 129 67.4
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 1.1e-44 184.1 130 65.4
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 1.5e-44 183.7 131 65.6
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 2.5e-44 183.0 130 65.4
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 2.5e-44 183.0 130 65.4
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 2.5e-44 183.0 130 65.4
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 3.3e-44 182.6 130 64.6
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 3.3e-44 182.6 130 63.8
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 3.3e-44 182.6 130 65.4
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 3.3e-44 182.6 130 64.6
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 4.3e-44 182.2 130 64.6
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 4.3e-44 182.2 130 64.6
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 9.6e-44 181.0 130 63.8
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 9.6e-44 181.0 130 65.4
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 1.3e-43 180.6 130 63.1
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 1.6e-43 180.3 130 62.3
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 2.1e-43 179.9 130 62.3
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 2.1e-43 179.9 130 62.3
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 2.8e-43 179.5 130 63.1
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 2.8e-43 179.5 130 63.1
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 3.7e-43 179.1 130 62.3
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 3.7e-43 179.1 130 62.3
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 6.3e-43 178.3 131 62.6
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 8.2e-43 177.9 130 63.8
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 8.2e-43 177.9 130 65.4
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 1.1e-42 177.6 130 62.3
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 1.1e-42 177.6 130 62.3
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 1.1e-42 177.6 128 64.1
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 1.1e-42 177.6 130 63.8
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 1.1e-42 177.6 130 63.1
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 1.1e-42 177.6 130 63.8
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 1.1e-42 177.6 130 62.3
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 1.4e-42 177.2 130 62.3
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 1.4e-42 177.2 130 62.3
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 1.8e-42 176.8 210 48.1
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 1.8e-42 176.8 130 61.5
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 1.8e-42 176.8 130 62.3
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 2.4e-42 176.4 130 63.8
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 2.4e-42 176.4 130 61.5
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 2.4e-42 176.4 130 61.5
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 2.4e-42 176.4 130 62.3
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 3.1e-42 176.0 130 62.3
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 3.1e-42 176.0 130 61.5
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 3.1e-42 176.0 130 61.5
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 4.1e-42 175.6 130 63.1
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 4.1e-42 175.6 130 61.5
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 4.1e-42 175.6 130 61.5
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 5.3e-42 175.3 130 63.1
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 5.3e-42 175.3 130 63.1
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 5.3e-42 175.3 130 63.1
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 5.3e-42 175.3 130 62.3
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 5.3e-42 175.3 130 61.5
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 5.3e-42 175.3 130 62.3
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 5.3e-42 175.3 130 62.3
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 5.3e-42 175.3 130 62.3
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 6.9e-42 174.9 128 64.1
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 6.9e-42 174.9 130 63.8
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 6.9e-42 174.9 130 62.3
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 6.9e-42 174.9 130 61.5
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 1.2e-41 174.1 130 63.8
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 1.2e-41 174.1 130 63.8
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 1.2e-41 174.1 131 61.8
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 1.2e-41 174.1 128 63.3
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 1.2e-41 174.1 130 60.0
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 1.5e-41 173.7 130 63.1
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 1.5e-41 173.7 130 63.1
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 1.5e-41 173.7 130 63.1
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 1.5e-41 173.7 173 50.9
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 1.5e-41 173.7 130 61.5
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 2.0e-41 173.3 180 51.1
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 2.0e-41 173.3 130 62.3
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.0e-41 173.3 130 62.3
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.0e-41 173.3 130 62.3
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.0e-41 173.3 130 62.3
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 2.0e-41 173.3 130 61.5
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 2.0e-41 173.3 130 62.3
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 2.0e-41 173.3 130 62.3
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 2.6e-41 172.9 130 62.3
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 2.6e-41 172.9 130 60.8
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 2.6e-41 172.9 185 50.3
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 2.6e-41 172.9 130 61.5
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 3.4e-41 172.6 130 63.1
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 3.4e-41 172.6 126 63.5
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 3.4e-41 172.6 180 51.1
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 4.5e-41 172.2 130 62.3
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 5.9e-41 171.8 131 61.1
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 5.9e-41 171.8 130 60.8
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 5.9e-41 171.8 130 61.5
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 7.6e-41 171.4 130 60.8
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 1.0e-40 171.0 130 60.0
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 1.3e-40 170.6 128 62.5
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 2.5e-39 166.4 160 52.5
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 5.5e-39 165.2 130 59.2
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 6.7e-37 158.3 92 77.2
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 1.5e-33 147.1 115 59.1
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 2.7e-30 136.3 130 53.1
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 1.8e-29 133.7 101 63.4
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 7.4e-28 128.3 102 57.8
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 1.2e-25 120.9 102 54.9
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 2.1e-22 110.2 102 51.0
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 4.5e-17 92.4 130 41.5
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 1.5e-15 87.4 126 40.5
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 2.3e-13 80.1 59 66.1
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 1.4e-10 70.9 41 73.2
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 3.1e-10 69.7 48 62.5
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 5.5e-07 58.9 62 48.4


User provided reference genes

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