Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_11850 Physcomitrium patens HOM05D005851 ORTHO05D007137 9.7e-124 446.8 224 100.0
Pp3c12_9510 Physcomitrium patens HOM05D005851 ORTHO05D007137 5.4e-74 281.6 233 67.0
Mapoly0066s0013 Marchantia polymorpha HOM05D005851 ORTHO05D007137 2.1e-49 199.9 139 68.3
Nitab4.5_0006122g0020 Nicotiana tabacum HOM05D005851 ORTHO05D007137 1.2e-44 184.1 144 66.0
CsaV3_3G003320 Cucumis sativus L. HOM05D005851 ORTHO05D007137 4.4e-44 182.2 189 55.0
Sc01g0009080 Simmondsia chinensis HOM05D005851 ORTHO05D007137 4.4e-44 182.2 136 66.9
Rhsim05G0172500 Rhododendron simsii HOM05D005851 ORTHO05D007137 5.8e-44 181.8 217 49.3
Nitab4.5_0000439g0090 Nicotiana tabacum HOM05D005851 ORTHO05D007137 7.6e-44 181.4 139 65.5
Sopen08g028040 Solanum pennellii HOM05D005851 ORTHO05D007137 1.3e-43 180.6 139 64.7
Peaxi162Scf00620g00019 Petunia axillaris HOM05D005851 ORTHO05D007137 2.2e-43 179.9 143 62.9
SMO364G0744 Selaginella moellendorffii HOM05D005851 ORTHO05D007137 2.2e-43 179.9 127 64.6
CSS0019536 Camellia sinensis var. sinensis HOM05D005851 ORTHO05D007137 2.9e-43 179.5 145 64.1
Solyc08g079680.3 Solanum lycopersicum HOM05D005851 ORTHO05D007137 2.9e-43 179.5 139 64.0
Cc08_g13500 Coffea canephora HOM05D005851 ORTHO05D007137 1.1e-42 177.6 199 50.3
PGSC0003DMG400003949 Solanum tuberosum HOM05D005851 ORTHO05D007137 1.4e-42 177.2 139 65.5
Actinidia14484 Actinidia chinensis HOM05D005851 ORTHO05D007137 1.9e-42 176.8 176 55.7
HPP92_025677 Vanilla planifolia HOM05D005851 ORTHO05D007137 1.9e-42 176.8 151 62.9
TAR629G1703 Trochodendron aralioides HOM05D005851 ORTHO05D007137 2.4e-42 176.4 133 66.9
Atru.chr9.1473 Acer truncatum HOM05D005851 ORTHO05D007137 3.2e-42 176.0 204 52.9
MELO3C013999.2 Cucumis melo HOM05D005851 ORTHO05D007137 4.2e-42 175.6 198 53.0
MD06G1068000 Malus domestica HOM05D005851 ORTHO05D007137 4.2e-42 175.6 116 71.6
PGR042G2385 Punica granatum HOM05D005851 ORTHO05D007137 5.4e-42 175.3 104 76.9
AUR62010535 Chenopodium quinoa HOM05D005851 ORTHO05D007137 7.1e-42 174.9 126 68.3
Hma1.2p1_0367F.1_g137205 Hydrangea macrophylla HOM05D005851 ORTHO05D007137 7.1e-42 174.9 132 66.7
GSVIVG01019923001 Vitis vinifera HOM05D005851 ORTHO05D007137 7.1e-42 174.9 104 77.9
AUR62017360 Chenopodium quinoa HOM05D005851 ORTHO05D007137 9.3e-42 174.5 187 51.9
HanXRQChr09g0246661 Helianthus annuus HOM05D005851 ORTHO05D007137 9.3e-42 174.5 189 51.3
MBI12_g34479_MAGBIO Magnolia biondii HOM05D005851 ORTHO05D007137 9.3e-42 174.5 137 66.4
arahy.Tifrunner.gnm1.ann1.BUTP6K Arachis hypogaea HOM05D005851 ORTHO05D007137 1.2e-41 174.1 103 76.7
Aa31LG6G4910 Aethionema arabicum HOM05D000943 ORTHO05D002475 1.6e-41 173.7 137 63.5
ATR0810G218 Amborella trichopoda HOM05D005851 ORTHO05D007137 1.6e-41 173.7 148 57.4
arahy.Tifrunner.gnm1.ann1.KEJN3W Arachis hypogaea HOM05D005851 ORTHO05D007137 1.6e-41 173.7 112 74.1
SalBow1G3546 Salvia bowleyana HOM05D005851 ORTHO05D007137 1.6e-41 173.7 104 77.9
vmacro00216 Vaccinium macrocarpon HOM05D005851 ORTHO05D007137 1.6e-41 173.7 229 45.4
SGA_v2.0_scaffold144G35989 Striga asiatica HOM05D005851 ORTHO05D007137 2.1e-41 173.3 117 70.1
TWI60G0484 Tripterygium wilfordii HOM05D005851 ORTHO05D007137 2.1e-41 173.3 144 63.9
CAN.G630.46 Capsicum annuum HOM05D005851 ORTHO05D007137 2.7e-41 172.9 105 76.2
Oeu064711.1 Olea europaea HOM05D005851 ORTHO05D007137 2.7e-41 172.9 135 65.9
QL12p015621 Quercus lobata HOM05D005851 ORTHO05D007137 2.7e-41 172.9 170 56.5
CDE04G1030 Ceratophyllum demersum HOM05D005851 ORTHO05D007137 3.5e-41 172.6 134 65.7
Os04g0379400 Oryza sativa ssp. japonica HOM05D005851 ORTHO05D007137 3.5e-41 172.6 106 73.6
RcHm_v2.0_Chr7g0200451 Rosa chinensis HOM05D005851 ORTHO05D007137 7.9e-41 171.4 137 61.3
Cpa.g.sc29.62 Carica papaya HOM05D005851 ORTHO05D007137 1.0e-40 171.0 158 57.6
Psat2g180400 Pisum sativum HOM05D005851 ORTHO05D007137 1.3e-40 170.6 103 74.8
FAN04G1422 Fragaria x ananassa HOM05D005851 ORTHO05D007137 1.7e-40 170.2 140 59.3
FAN13G0774 Fragaria x ananassa HOM05D005851 ORTHO05D007137 1.7e-40 170.2 140 62.1
Medtr5g011460 Medicago truncatula HOM05D005851 ORTHO05D007137 1.7e-40 170.2 107 72.9
Duzib205G1229 Durio zibethinus HOM05D005851 ORTHO05D007137 2.3e-40 169.9 105 76.2
THA.LOC104814025 Tarenaya hassleriana HOM05D005851 ORTHO05D007137 2.3e-40 169.9 142 62.0
BcaNung01022 Brassica carinata HOM05D005851 ORTHO05D007137 3.0e-40 169.5 144 60.4
EL10Ac5g12653 Beta vulgaris HOM05D005851 ORTHO05D007137 3.9e-40 169.1 97 78.4
FvH4_5g00940 Fragaria vesca HOM05D005851 ORTHO05D007137 3.9e-40 169.1 140 61.4
Potri.001G114800 Populus trichocarpa HOM05D005851 ORTHO05D007137 3.9e-40 169.1 104 75.0
Solyc08g007580.4 Solanum lycopersicum HOM05D005851 ORTHO05D007137 3.9e-40 169.1 105 72.4
Sopen08g003540 Solanum pennellii HOM05D005851 ORTHO05D007137 3.9e-40 169.1 105 72.4
A01p14080 Brassica napus HOM05D005851 ORTHO05D007137 6.6e-40 168.3 144 60.4
BolC1t01669H Brassica oleracea HOM05D005851 ORTHO05D007137 6.6e-40 168.3 144 60.4
BraA01t01356Z Brassica rapa HOM05D005851 ORTHO05D007137 6.6e-40 168.3 144 60.4
CAN.G1394.24 Capsicum annuum HOM05D005851 ORTHO05D007137 6.6e-40 168.3 128 64.8
TPR.G19565 Trifolium pratense HOM05D005851 ORTHO05D007137 6.6e-40 168.3 103 73.8
Glyma.01G213300 Glycine max HOM05D005851 ORTHO05D007137 8.7e-40 167.9 99 77.8
Zm00001eb103020 Zea mays HOM05D005851 ORTHO05D007137 1.1e-39 167.5 109 69.7
PGSC0003DMG400012515 Solanum tuberosum HOM05D005851 ORTHO05D007137 1.5e-39 167.2 105 72.4
BcaC09g51070 Brassica carinata HOM05D005851 ORTHO05D007137 1.9e-39 166.8 144 59.7
BcaC09g51071 Brassica carinata HOM05D005851 ORTHO05D007137 1.9e-39 166.8 144 59.7
C01p17300 Brassica napus HOM05D005851 ORTHO05D007137 1.9e-39 166.8 144 59.7
Nitab4.5_0001816g0070 Nicotiana tabacum HOM05D005851 ORTHO05D007137 1.9e-39 166.8 105 73.3
ECA233G5981 Erigeron canadensis HOM05D005851 ORTHO05D007137 2.5e-39 166.4 144 60.4
Gohir.A12G222500 Gossypium hirsutum HOM05D005851 ORTHO05D007137 3.3e-39 166.0 108 73.1
Gohir.D12G225000 Gossypium hirsutum HOM05D005851 ORTHO05D007137 3.3e-39 166.0 108 73.1
Gorai.008G241100 Gossypium raimondii HOM05D005851 ORTHO05D007137 3.3e-39 166.0 108 73.1
MSTRG.1924 Avicennia marina HOM05D005851 ORTHO05D007137 7.4e-39 164.9 144 57.6
Nitab4.5_0001265g0130 Nicotiana tabacum HOM05D005851 ORTHO05D007137 7.4e-39 164.9 144 59.0
AT4G22830 Arabidopsis thaliana HOM05D005851 ORTHO05D007137 1.3e-38 164.1 134 61.9
CARHR229860 Cardamine hirsuta HOM05D005851 ORTHO05D007137 1.3e-38 164.1 102 75.5
Sabra01G0087800 Salix brachista HOM05D005851 ORTHO05D007137 1.3e-38 164.1 202 49.5
AL7G30690 Arabidopsis lyrata HOM05D005851 ORTHO05D007137 1.6e-38 163.7 134 61.2
Thhalv10026321m.g Eutrema salsugineum HOM05D005851 ORTHO05D007137 1.6e-38 163.7 134 61.2
Ciclev10024430m.g Citrus clementina HOM05D005851 ORTHO05D007137 2.1e-38 163.3 132 62.9
Phvul.002G151800 Phaseolus vulgaris HOM05D005851 ORTHO05D007137 2.1e-38 163.3 103 74.8
Lj2g0003035 Lotus japonicus HOM05D005851 ORTHO05D007137 2.8e-38 162.9 99 73.7
Carub.0007s1844 Capsella rubella HOM05D005851 ORTHO05D007137 3.6e-38 162.5 134 60.4
Cre12.g555400 Chlamydomonas reinhardtii HOM05D005851 ORTHO05D007137 1.2e-36 157.5 120 58.3
CiPaw.11G145200 Carya illinoinensis HOM05D005851 ORTHO05D007137 3.4e-36 156.0 94 75.5
Lalb_Chr16g0379871 Lupinus albus HOM05D005851 ORTHO05D007137 5.8e-36 155.2 94 73.4
Ah.02g116130 Amaranthus hybridus HOM05D005851 ORTHO05D007137 7.6e-36 154.8 88 78.4
Glyma.11G028600 Glycine max HOM05D005851 ORTHO05D007137 7.1e-34 148.3 83 80.7
FAN08G3582 Fragaria x ananassa HOM05D005851 ORTHO05D007137 3.5e-33 146.0 108 64.8
SEGI_29987 Sequoiadendron giganteum HOM05D005851 ORTHO05D007137 1.0e-32 144.4 109 62.4
CANSAT95G0001 Cannabis sativa HOM05D005851 ORTHO05D007137 8.7e-32 141.4 147 53.7
Sed0022049 Sechium edule HOM05D005851 ORTHO05D007137 3.3e-31 139.4 110 62.7
Manes.02G031801 Manihot esculenta HOM05D005851 ORTHO05D007137 6.2e-30 135.2 88 69.3
DCAR_000876 Daucus carota HOM05D005851 ORTHO05D007137 4.0e-29 132.5 78 73.1
Migut.E01010 Erythranthe guttata HOM05D005851 ORTHO05D007137 4.0e-29 132.5 107 57.0
COL.COLO4_23838 Corchorus olitorius HOM05D005851 ORTHO05D007137 2.6e-28 129.8 80 73.8
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 1.0e-27 127.9 106 54.7
VMungo1215G2211 Vigna mungo HOM05D005851 ORTHO05D007137 4.9e-27 125.6 74 75.7
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 5.5e-26 122.1 190 38.4
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 1.0e-24 117.9 139 44.6
Nn1g01189 Nelumbo nucifera HOM05D005851 ORTHO05D007137 5.7e-23 112.1 105 57.1
FAN18G0436 Fragaria x ananassa HOM05D005851 ORTHO05D007137 7.4e-23 111.7 140 48.6
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 8.2e-22 108.2 99 46.5
MCO14G294 Micromonas commoda HOM05D005851 ORTHO05D007137 5.3e-21 105.5 95 51.6
ClCG00G000050 Citrullus lanatus HOM05D005851 ORTHO05D007137 3.8e-19 99.4 142 45.1
ClCG00G005270 Citrullus lanatus HOM05D005851 ORTHO05D007137 3.8e-19 99.4 142 45.1
ClCG10G003300 Citrullus lanatus HOM05D005851 ORTHO05D007137 3.8e-19 99.4 142 45.1
ClCG00G004660 Citrullus lanatus HOM05D005851 ORTHO05D007137 5.0e-19 99.0 140 45.7
PSO782G0540 Papaver somniferum HOM05D005851 ORTHO05D007137 2.7e-17 93.2 90 52.2
MD04G1076900 Malus domestica HOM05D005851 ORTHO05D007137 4.6e-17 92.4 54 77.8
Thecc.03G264400 Theobroma cacao HOM05D005851 ORTHO05D007137 4.6e-17 92.4 62 67.7
Dinv39057 Davidia involucrata HOM05D005851 ORTHO05D007137 1.3e-16 90.9 58 75.9
Lj2A204T50 Lonicera japonica HOM05D005851 ORTHO05D007137 1.3e-16 90.9 50 72.0
Eucgr.E00492 Eucalyptus grandis HOM05D005851 ORTHO05D007137 1.8e-16 90.5 52 76.9
Hund14676 Selenicereus undatus HOM05D005851 ORTHO05D007137 8.7e-16 88.2 131 41.2
unitig_699.g19746 Utricularia gibba HOM05D002021 ORTHO05D002077 8.7e-16 88.2 64 62.5
PRCOL_00002728 Prasinoderma coloniale HOM05D005851 ORTHO05D049091 1.5e-15 87.4 143 36.4
Ca_06681_v3 Cicer arietinum L. HOM05D000943 ORTHO05D002475 2.5e-15 86.7 92 44.6
Lsat_1_v5_gn_6_10241 Lactuca sativa HOM05D005851 ORTHO05D007137 2.5e-15 86.7 98 51.0
Nn4g26436 Nelumbo nucifera HOM05D005851 ORTHO05D007137 7.4e-15 85.1 52 73.1
CBR_g50783 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-13 81.3 54 63.0
BolC3t15330H Brassica oleracea HOM05D005851 ORTHO05D007137 5.1e-08 62.4 41 68.3


User provided reference genes

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