Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 5.0e-151 537.7 269 100.0
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 2.9e-74 282.7 208 67.8
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 2.1e-64 250.0 263 49.0
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 1.0e-63 247.7 191 61.3
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 1.4e-63 247.3 216 56.9
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 1.4e-63 247.3 253 50.6
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 3.9e-63 245.7 185 63.2
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 6.7e-63 245.0 185 62.7
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 8.8e-63 244.6 189 61.4
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 8.8e-63 244.6 185 61.6
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 1.1e-62 244.2 193 60.1
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 1.5e-62 243.8 234 53.4
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 2.0e-62 243.4 197 58.4
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 3.3e-62 242.7 203 58.1
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 4.4e-62 242.3 216 55.6
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 5.7e-62 241.9 185 61.6
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 5.7e-62 241.9 185 61.1
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 7.4e-62 241.5 185 60.5
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 9.7e-62 241.1 185 61.6
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 9.7e-62 241.1 214 54.7
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 9.7e-62 241.1 193 59.6
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 1.3e-61 240.7 187 61.5
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 1.3e-61 240.7 188 61.2
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 1.7e-61 240.4 197 58.4
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 2.8e-61 239.6 187 60.4
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 2.8e-61 239.6 188 60.1
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 2.8e-61 239.6 187 61.0
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 3.7e-61 239.2 190 62.1
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 3.7e-61 239.2 185 61.6
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 4.8e-61 238.8 225 53.8
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 6.3e-61 238.4 184 61.4
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 6.3e-61 238.4 187 59.9
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 6.3e-61 238.4 187 60.4
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 6.3e-61 238.4 185 61.6
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 6.3e-61 238.4 212 56.1
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 8.2e-61 238.0 187 58.8
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 8.2e-61 238.0 188 60.1
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 8.2e-61 238.0 187 58.3
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 1.1e-60 237.7 212 55.2
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 1.1e-60 237.7 214 54.7
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 1.4e-60 237.3 185 60.5
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 1.4e-60 237.3 187 59.9
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 1.4e-60 237.3 187 59.9
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 1.8e-60 236.9 187 59.4
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 2.4e-60 236.5 212 56.1
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 3.1e-60 236.1 212 55.2
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 3.1e-60 236.1 187 58.3
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 4.1e-60 235.7 184 59.8
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 4.1e-60 235.7 190 58.4
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 4.1e-60 235.7 193 59.6
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 5.3e-60 235.3 184 59.2
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 5.3e-60 235.3 189 59.8
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 6.9e-60 235.0 189 61.4
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 9.1e-60 234.6 212 54.7
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 9.1e-60 234.6 231 50.2
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 1.2e-59 234.2 187 58.8
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.5e-59 233.8 193 58.0
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.5e-59 233.8 200 57.0
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.5e-59 233.8 200 57.0
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 2.0e-59 233.4 187 58.3
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 2.0e-59 233.4 185 59.5
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 2.6e-59 233.0 185 61.1
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 5.9e-59 231.9 200 56.5
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 7.7e-59 231.5 188 59.0
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 1.3e-58 230.7 187 60.4
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 3.8e-58 229.2 185 59.5
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 3.8e-58 229.2 189 59.3
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 3.8e-58 229.2 189 58.7
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 3.8e-58 229.2 189 59.3
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 3.8e-58 229.2 189 59.3
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 6.5e-58 228.4 187 59.4
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 6.5e-58 228.4 214 54.2
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 8.5e-58 228.0 189 58.7
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 1.4e-57 227.3 187 56.7
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 3.2e-57 226.1 188 58.5
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 3.2e-57 226.1 191 57.6
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 4.2e-57 225.7 183 59.0
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 5.5e-57 225.3 181 60.8
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 5.5e-57 225.3 183 57.9
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 7.2e-57 224.9 187 57.2
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 1.2e-56 224.2 185 56.8
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 1.6e-56 223.8 236 51.3
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 2.1e-56 223.4 181 59.7
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 3.6e-56 222.6 177 60.5
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 3.6e-56 222.6 209 53.6
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 4.7e-56 222.2 207 53.6
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 7.9e-56 221.5 262 45.8
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 1.1e-54 217.6 212 52.8
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 1.5e-54 217.2 211 52.6
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 1.5e-54 217.2 210 53.3
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 5.7e-54 215.3 187 52.9
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 7.4e-54 214.9 183 56.3
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 9.7e-54 214.5 254 48.0
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 1.7e-53 213.8 226 52.7
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 2.8e-53 213.0 183 56.3
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 6.3e-53 211.8 180 58.3
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 1.6e-51 207.2 186 57.0
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 1.6e-51 207.2 186 57.0
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 5.9e-51 205.3 166 60.2
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 1.0e-50 204.5 197 51.8
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 3.5e-43 179.5 151 56.3
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 5.0e-42 175.6 154 53.9
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 4.7e-40 169.1 114 66.7
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 5.7e-38 162.2 102 69.6
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 2.3e-31 140.2 132 50.8
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 3.4e-22 109.8 89 57.3
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 7.8e-19 98.6 164 42.7
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 5.4e-12 75.9 86 43.0
PRCOL_00005158 Prasinoderma coloniale HOM05D006957 ORTHO05D008647 1.5e-09 67.8 165 32.1
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 1.9e-09 67.4 81 39.5
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 2.1e-08 63.9 135 31.9
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.4e-07 61.2 52 53.8
Cpa.g.sc1199.4 Carica papaya HOM05D006957 ORTHO05D008647 1.2e-06 58.2 33 81.8


User provided reference genes

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