Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 6.5e-263 910.2 473 100.0
Mapoly0048s0108 Marchantia polymorpha HOM05D017347 ORTHO05D008131 3.8e-130 469.2 492 56.3
Pp3c14_22420 Physcomitrium patens HOM05D017347 ORTHO05D008131 3.7e-72 276.6 241 65.1
SEGI_34425 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 2.0e-70 270.8 504 39.7
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 1.3e-56 224.9 485 37.5
CBR_g27764 Chara braunii HOM05D017347 ORTHO05D008131 3.0e-42 177.2 116 72.4
SEGI_18590 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 1.9e-36 157.9 477 32.5
SMO201G0051 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 2.3e-18 97.8 106 45.3
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 9.8e-17 92.4 145 39.3
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 9.2e-15 85.9 108 44.4
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 1.2e-14 85.5 106 40.6
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 2.0e-14 84.7 160 35.6
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 7.8e-14 82.8 110 40.9
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 7.8e-14 82.8 110 40.9
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 2.9e-13 80.9 98 40.8
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 3.9e-13 80.5 102 41.2
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 3.9e-13 80.5 107 41.1
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 6.6e-13 79.7 100 42.0
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.1e-12 79.0 103 39.8
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.5e-12 78.6 102 40.2
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 1.5e-12 78.6 98 39.8
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.9e-12 78.2 102 42.2
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 2.5e-12 77.8 107 42.1
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 4.3e-12 77.0 160 33.8
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 5.6e-12 76.6 104 37.5
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 5.6e-12 76.6 104 37.5
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 9.5e-12 75.9 98 38.8
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 1.6e-11 75.1 105 40.0
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 3.6e-11 73.9 99 39.4
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 1.4e-10 72.0 103 37.9
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 1.4e-10 72.0 108 37.0
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 1.8e-10 71.6 112 39.3
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 1.8e-10 71.6 101 39.6
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 1.8e-10 71.6 103 38.8
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 2.3e-10 71.2 114 32.5
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 3.1e-10 70.9 99 40.4
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 4.0e-10 70.5 95 44.2
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 4.0e-10 70.5 105 40.0
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 4.0e-10 70.5 109 39.4
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 5.2e-10 70.1 97 41.2
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 5.2e-10 70.1 89 41.6
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 6.8e-10 69.7 99 42.4
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 6.8e-10 69.7 116 37.9
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 8.9e-10 69.3 110 40.9
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 8.9e-10 69.3 101 38.6
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 8.9e-10 69.3 100 41.0
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 1.2e-09 68.9 107 37.4
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 2.0e-09 68.2 107 33.6
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 4.4e-09 67.0 110 38.2
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 1.3e-08 65.5 111 34.2
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 1.7e-08 65.1 114 33.3
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 2.2e-08 64.7 99 35.4
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 2.9e-08 64.3 110 37.3
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 2.9e-08 64.3 108 38.0
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 3.7e-08 63.9 94 42.6
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 6.4e-08 63.2 105 33.3
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 6.4e-08 63.2 105 38.1
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 1.1e-07 62.4 105 35.2
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 1.4e-07 62.0 149 28.2
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 1.9e-07 61.6 104 33.7
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 3.2e-07 60.8 101 33.7
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 1.2e-06 58.9 110 34.5
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 1.6e-06 58.5 63 44.4
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 2.7e-06 57.8 107 36.4


User provided reference genes

Program Settings