Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.T084100 Populus trichocarpa HOM05D011207 ORTHO05D010720 5.8e-40 167.2 88 100.0
Potri.003G212150 Populus trichocarpa HOM05D011207 ORTHO05D010720 1.1e-38 162.9 88 96.6
Potri.001G014025 Populus trichocarpa HOM05D011207 ORTHO05D010720 7.4e-19 97.1 88 65.9
Manes.14G015100 Manihot esculenta HOM05D011207 ORTHO05D010720 4.8e-18 94.4 82 62.2
Nn7g37272 Nelumbo nucifera HOM05D011207 ORTHO05D010720 4.2e-14 81.3 83 55.4
CiPaw.13G168100 Carya illinoinensis HOM05D011207 ORTHO05D010720 1.2e-13 79.7 88 54.5
Gohir.A08G077800 Gossypium hirsutum HOM05D011207 ORTHO05D010720 3.6e-13 78.2 86 57.0
Gohir.D08G087800 Gossypium hirsutum HOM05D011207 ORTHO05D010720 7.9e-13 77.0 86 55.8
Gorai.004G092400 Gossypium raimondii HOM05D011207 ORTHO05D010720 7.9e-13 77.0 86 55.8
Haze_23031 Corylus avellana HOM05D000038 ORTHO05D000143 1.8e-12 75.9 88 53.4
Gohir.D13G218800 Gossypium hirsutum HOM05D011207 ORTHO05D010720 1.8e-12 75.9 85 57.6
Gorai.013G249600 Gossypium raimondii HOM05D011207 ORTHO05D010720 1.8e-12 75.9 85 57.6
Prupe.6G017600 Prunus persica HOM05D011207 ORTHO05D010720 3.0e-12 75.1 90 53.3
Haze_11366 Corylus avellana HOM05D011207 ORTHO05D010720 1.3e-10 69.7 89 49.4
CiPaw.09G031300 Carya illinoinensis HOM05D014525 ORTHO05D010720 1.4e-09 66.2 84 50.0
Atru.chr3.2465 Acer truncatum HOM05D011207 ORTHO05D010720 4.5e-08 61.2 70 55.7
Cfa009664 Carpinus fangiana HOM05D000038 ORTHO05D000143 7.7e-08 60.5 75 53.3
Prupe.7G075600 Prunus persica HOM05D029840 ORTHO05D010720 1.7e-07 59.3 85 47.1
Glyma.09G112600 Glycine max HOM05D014315 ORTHO05D010720 2.2e-07 58.9 83 41.0
Thecc.05G170000 Theobroma cacao HOM05D014525 ORTHO05D010720 2.2e-07 58.9 75 49.3
TPR.G18205 Trifolium pratense HOM05D014315 ORTHO05D010720 3.8e-07 58.2 83 42.2
ClCG02G023480 Citrullus lanatus HOM05D059243 ORTHO05D010720 8.5e-07 57.0 86 45.3
Atru.chr8.1081 Acer truncatum HOM05D014525 ORTHO05D010720 1.1e-06 56.6 72 50.0
Medtr1g106920 Medicago truncatula HOM05D017872 ORTHO05D010720 1.1e-06 56.6 82 40.2
Glyma.02G178700 Glycine max HOM05D014315 ORTHO05D010720 2.5e-06 55.5 83 39.8
Glyma.10G256800 Glycine max HOM05D017872 ORTHO05D010720 2.5e-06 55.5 88 40.9
FAN25G0891 Fragaria x ananassa HOM05D011207 ORTHO05D010720 3.2e-06 55.1 83 47.0
Glyma.19G147000 Glycine max HOM05D014315 ORTHO05D010720 3.2e-06 55.1 80 43.8
Lsat_1_v5_gn_6_49761 Lactuca sativa HOM05D011207 ORTHO05D232698 5.5e-06 54.3 85 45.9
Lalb_Chr15g0078961 Lupinus albus HOM05D014315 ORTHO05D010720 5.5e-06 54.3 77 37.7
Medtr7g093050 Medicago truncatula HOM05D014315 ORTHO05D010720 5.5e-06 54.3 88 42.0


User provided reference genes

Program Settings