Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.T046554 Populus trichocarpa HOM05D006650 ORTHO05D008401 2.7e-148 528.9 307 100.0
Potri.008G109700 Populus trichocarpa HOM05D006650 ORTHO05D008401 1.6e-145 519.6 309 98.7
Sabra08G0083500 Salix brachista HOM05D006650 ORTHO05D008401 4.0e-136 488.4 307 92.8
Manes.14G094300 Manihot esculenta HOM05D006650 ORTHO05D008401 7.6e-103 377.9 306 68.0
Atru.chr11.1444 Acer truncatum HOM05D006650 ORTHO05D008401 7.6e-95 351.3 305 65.6
Ciclev10032286m.g Citrus clementina HOM05D006650 ORTHO05D008401 4.2e-93 345.5 304 64.5
TWI75G1831 Tripterygium wilfordii HOM05D006650 ORTHO05D008401 8.7e-91 337.8 308 65.3
Prupe.1G299800 Prunus persica HOM05D006650 ORTHO05D008401 4.8e-89 332.0 305 63.0
Duzib248G0229 Durio zibethinus HOM05D006650 ORTHO05D008401 9.9e-87 324.3 250 74.0
MD13G1052300 Malus domestica HOM05D006650 ORTHO05D008401 4.9e-86 322.0 301 61.5
RcHm_v2.0_Chr4g0436681 Rosa chinensis HOM05D006650 ORTHO05D008401 4.2e-85 318.9 302 59.9
FAN17G3038 Fragaria x ananassa HOM05D006650 ORTHO05D008401 7.1e-85 318.2 305 59.3
Cfa008806 Carpinus fangiana HOM05D006650 ORTHO05D008401 9.3e-85 317.8 307 59.3
QL03p046578 Quercus lobata HOM05D006650 ORTHO05D008401 1.6e-84 317.0 305 60.0
FAN07G0603 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.7e-84 316.2 304 59.5
CiPaw.05G118400 Carya illinoinensis HOM05D006650 ORTHO05D008401 6.0e-84 315.1 297 59.3
Hma1.2p1_1424F.1_g282740 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 7.9e-84 314.7 215 75.3
Thecc.02G315100 Theobroma cacao HOM05D006650 ORTHO05D008401 5.1e-83 312.0 249 73.9
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 6.7e-83 311.6 215 75.3
Thhalv10008392m.g Eutrema salsugineum HOM05D006650 ORTHO05D008401 6.7e-83 311.6 304 59.5
Ca_04377_v3 Cicer arietinum L. HOM05D006650 ORTHO05D008401 3.3e-82 309.3 254 65.0
Phvul.003G034600 Phaseolus vulgaris HOM05D006650 ORTHO05D008401 3.3e-82 309.3 304 60.2
Sp1g22480 Schrenkiella parvula HOM05D006650 ORTHO05D008401 7.4e-82 308.1 258 65.5
Gohir.A04G144800 Gossypium hirsutum HOM05D006650 ORTHO05D008401 1.3e-81 307.4 304 62.5
ClCG08G004790 Citrullus lanatus HOM05D006650 ORTHO05D008401 1.6e-81 307.0 266 64.3
AL1G39570 Arabidopsis lyrata HOM05D006650 ORTHO05D008401 2.1e-81 306.6 293 58.4
CANSAT64G2403 Cannabis sativa HOM05D006650 ORTHO05D008401 2.8e-81 306.2 250 66.4
Glyma.02G128500 Glycine max HOM05D006650 ORTHO05D008401 2.8e-81 306.2 215 73.5
Gorai.012G184600 Gossypium raimondii HOM05D006650 ORTHO05D008401 2.8e-81 306.2 304 62.5
CsaV3_6G003950 Cucumis sativus L. HOM05D006650 ORTHO05D008401 4.8e-81 305.4 291 59.5
CARHR025730 Cardamine hirsuta HOM05D006650 ORTHO05D008401 1.1e-80 304.3 307 57.7
Carub.0001s2478 Capsella rubella HOM05D006650 ORTHO05D008401 1.4e-80 303.9 208 74.5
Psat1g085040 Pisum sativum HOM05D006650 ORTHO05D008401 1.4e-80 303.9 250 64.4
COL.COLO4_27715 Corchorus olitorius HOM05D006650 ORTHO05D008401 1.8e-80 303.5 304 57.2
Aqoxy3G03817 Aquilegia oxysepala HOM05D006650 ORTHO05D008401 9.0e-80 301.2 215 71.2
arahy.Tifrunner.gnm1.ann1.1PS8SX Arachis hypogaea HOM05D006650 ORTHO05D008401 1.5e-79 300.4 216 71.8
Sed0026335 Sechium edule HOM05D006650 ORTHO05D008401 2.0e-79 300.1 251 65.3
Medtr6g021510 Medicago truncatula HOM05D006650 ORTHO05D008401 4.5e-79 298.9 260 62.7
arahy.Tifrunner.gnm1.ann1.P12GZY Arachis hypogaea HOM05D006650 ORTHO05D008401 5.8e-79 298.5 292 61.3
Gohir.D04G189300 Gossypium hirsutum HOM05D006650 ORTHO05D008401 5.8e-79 298.5 304 61.8
PGR119G1187 Punica granatum HOM05D006650 ORTHO05D008401 5.8e-79 298.5 222 68.9
THA.LOC104821976 Tarenaya hassleriana HOM05D006650 ORTHO05D008401 5.8e-79 298.5 207 74.4
MELO3C011665.2 Cucumis melo HOM05D006650 ORTHO05D008401 2.2e-78 296.6 245 66.1
ATR0691G055 Amborella trichopoda HOM05D006650 ORTHO05D008401 3.8e-78 295.8 217 71.4
Lj2g0026821 Lotus japonicus HOM05D006650 ORTHO05D008401 8.4e-78 294.7 290 57.6
BolC3t19565H Brassica oleracea HOM05D006650 ORTHO05D008401 1.1e-77 294.3 296 57.1
FAN12G1321 Fragaria x ananassa HOM05D006650 ORTHO05D008401 2.5e-77 293.1 311 57.6
Lalb_Chr10g0099501 Lupinus albus HOM05D006650 ORTHO05D008401 5.5e-77 292.0 215 68.8
Rhsim09G0116700 Rhododendron simsii HOM05D006650 ORTHO05D008401 1.2e-76 290.8 251 63.7
Rhsim09G0116200 Rhododendron simsii HOM05D006650 ORTHO05D008401 6.7e-75 285.0 286 57.7
Actinidia32425 Actinidia chinensis HOM05D006650 ORTHO05D008401 1.9e-74 283.5 205 72.7
Nitab4.5_0008828g0010 Nicotiana tabacum HOM05D006650 ORTHO05D008401 1.9e-74 283.5 309 53.7
PSO063G6309 Papaver somniferum HOM05D006650 ORTHO05D008401 2.5e-74 283.1 209 71.8
Cc11_g11090 Coffea canephora HOM05D006650 ORTHO05D008401 3.3e-74 282.7 215 66.5
FAN22G1912 Fragaria x ananassa HOM05D006650 ORTHO05D008401 9.6e-74 281.2 348 51.1
Sopen05g006230 Solanum pennellii HOM05D006650 ORTHO05D008401 9.6e-74 281.2 218 67.0
C03p72670 Brassica napus HOM05D006650 ORTHO05D008401 1.6e-73 280.4 320 52.8
Nitab4.5_0000259g0270 Nicotiana tabacum HOM05D006650 ORTHO05D008401 2.8e-73 279.6 308 53.2
TPR.G21643 Trifolium pratense HOM05D006650 ORTHO05D008401 2.8e-73 279.6 265 58.5
GSVIVG01012028001 Vitis vinifera HOM05D006650 ORTHO05D008401 1.4e-72 277.3 193 74.1
MSTRG.800 Avicennia marina HOM05D006650 ORTHO05D008401 3.1e-72 276.2 224 63.4
PSO782G4155 Papaver somniferum HOM05D006650 ORTHO05D008401 4.1e-72 275.8 209 70.3
DCAR_023721 Daucus carota HOM05D006650 ORTHO05D008401 5.3e-72 275.4 246 60.6
CAN.G184.36 Capsicum annuum HOM05D006650 ORTHO05D008401 6.9e-72 275.0 208 68.8
FvH4_4g28590 Fragaria vesca HOM05D006650 ORTHO05D008401 1.4e-69 267.3 249 62.2
Migut.L01126 Erythranthe guttata HOM05D006650 ORTHO05D008401 1.9e-69 266.9 286 54.9
Os02g0326000 Oryza sativa ssp. japonica HOM05D006650 ORTHO05D008401 6.1e-68 261.9 215 63.7
ECA246G1261 Erigeron canadensis HOM05D006650 ORTHO05D008401 3.0e-67 259.6 218 62.8
HanXRQChr15g0475871 Helianthus annuus HOM05D006650 ORTHO05D008401 1.5e-66 257.3 308 51.3
TAR371G1079 Trochodendron aralioides HOM05D006650 ORTHO05D008401 4.3e-66 255.8 232 62.9
TAR371G0285 Trochodendron aralioides HOM05D006650 ORTHO05D008401 5.7e-66 255.4 232 62.5
VMungo1215G2545 Vigna mungo HOM05D006650 ORTHO05D008401 1.8e-64 250.4 159 78.6
Zm00001eb379060 Zea mays HOM05D006650 ORTHO05D008401 2.4e-64 250.0 207 63.8
A08p27180 Brassica napus HOM05D006650 ORTHO05D008401 1.5e-63 247.3 231 58.4
MD16G1057600 Malus domestica HOM05D006650 ORTHO05D008401 1.5e-63 247.3 231 62.8
Oeu054561.2 Olea europaea HOM05D006650 ORTHO05D008401 1.5e-63 247.3 245 56.7
BraA08t34664Z Brassica rapa HOM05D006650 ORTHO05D008401 2.0e-63 246.9 231 58.4
Dinv16555 Davidia involucrata HOM05D006650 ORTHO05D008401 3.4e-63 246.1 175 72.6
Aa31LG7G8830 Aethionema arabicum HOM05D006650 ORTHO05D008401 4.5e-63 245.7 152 79.6
Hma1.2p1_1424F.1_g282730 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 4.5e-63 245.7 267 56.2
Hma1.2p1_1459F.1_g284910 Hydrangea macrophylla HOM05D006650 ORTHO05D008401 2.2e-62 243.4 267 55.4
Sc11g0002870 Simmondsia chinensis HOM05D006650 ORTHO05D008401 1.1e-61 241.1 158 77.2
Atru.chr11.1474 Acer truncatum HOM05D006650 ORTHO05D008401 1.9e-61 240.4 160 79.4
vmacro10492 Vaccinium macrocarpon HOM05D006650 ORTHO05D008401 2.5e-61 240.0 331 48.6
CSS0028658 Camellia sinensis var. sinensis HOM05D006650 ORTHO05D008401 3.2e-61 239.6 189 68.3
Pp3c15_17200 Physcomitrium patens HOM05D006650 ORTHO05D008401 9.4e-61 238.0 211 56.9
unitig_22.g6887 Utricularia gibba HOM05D006650 ORTHO05D008401 1.6e-60 237.3 278 48.6
AagrBONN_evm.TU.Sc2ySwM_228.1783 Anthoceros agrestis HOM05D006650 ORTHO05D008401 2.3e-59 233.4 208 57.2
Mapoly0001s0402 Marchantia polymorpha HOM05D006650 ORTHO05D008401 3.0e-59 233.0 211 56.9
Lj8A100G102 Lonicera japonica HOM05D006650 ORTHO05D008401 1.1e-58 231.1 393 42.5
Ah.02g127370 Amaranthus hybridus HOM05D006650 ORTHO05D008401 2.8e-57 226.5 145 77.9
Lsat_1_v5_gn_3_61200 Lactuca sativa HOM05D006650 ORTHO05D008401 1.4e-56 224.2 330 45.2
SMO239G0062 Selaginella moellendorffii HOM05D006650 ORTHO05D008401 6.9e-56 221.9 202 55.0
Peaxi162Scf00188g00428 Petunia axillaris HOM05D006650 ORTHO05D008401 6.5e-54 215.3 231 54.5
SalBow8G0131 Salvia bowleyana HOM05D006650 ORTHO05D008401 1.1e-53 214.5 219 55.3
CDE02G2218 Ceratophyllum demersum HOM05D002187 ORTHO05D002243 5.2e-51 205.7 209 57.9
DCAR_026698 Daucus carota HOM05D006650 ORTHO05D008401 2.6e-50 203.4 252 47.6
SGA_v2.0_scaffold16G07854 Striga asiatica HOM05D006650 ORTHO05D008401 9.7e-50 201.4 328 45.1
AT1G26180 Arabidopsis thaliana HOM05D006650 ORTHO05D008401 2.0e-47 193.7 209 52.6
MBI15_g22709_MAGBIO Magnolia biondii HOM05D006650 ORTHO05D008401 1.3e-46 191.0 120 80.8
Haze_11820 Corylus avellana HOM05D006650 ORTHO05D008401 7.2e-45 185.3 195 55.9
PGSC0003DMG400007519 Solanum tuberosum HOM05D006650 ORTHO05D008401 9.4e-45 184.9 120 75.0
AUR62007783 Chenopodium quinoa HOM05D006650 ORTHO05D008401 5.2e-43 179.1 212 52.8
AUR62002977 Chenopodium quinoa HOM05D006650 ORTHO05D008401 1.2e-42 177.9 215 52.6
Nn4g23629 Nelumbo nucifera HOM05D006650 ORTHO05D008401 1.1e-40 171.4 110 79.1
CBR_g18672 Chara braunii HOM05D006650 ORTHO05D008401 9.1e-40 168.3 214 42.5
Cpa.g.sc1.261 Carica papaya HOM05D006650 ORTHO05D008401 1.7e-38 164.1 174 57.5
HPP92_021645 Vanilla planifolia HOM05D006650 ORTHO05D008401 1.5e-37 161.0 187 50.8
EL10Ac6g14586 Beta vulgaris HOM05D006650 ORTHO05D008401 2.0e-34 150.6 144 60.4
AagrBONN_evm.TU.Sc2ySwM_228.1786 Anthoceros agrestis HOM05D006650 ORTHO05D008401 1.7e-33 147.5 143 52.4
CBR_g25761 Chara braunii HOM05D006650 ORTHO05D008401 2.4e-32 143.7 190 42.1
CARHR153660 Cardamine hirsuta HOM05D006650 ORTHO05D008401 2.2e-30 137.1 116 61.2
SalBow8G0120 Salvia bowleyana HOM05D006650 ORTHO05D008401 9.5e-29 131.7 234 40.6
Hund05792 Selenicereus undatus HOM05D006650 ORTHO05D008401 9.8e-26 121.7 73 78.1
Sabra10G0102400 Salix brachista HOM05D006650 ORTHO05D008401 6.6e-22 109.0 111 60.4
Cre07.g340150 Chlamydomonas reinhardtii HOM05D006650 ORTHO05D008401 7.3e-21 105.5 187 36.9
MCO03G393 Micromonas commoda HOM05D006650 ORTHO05D008401 1.8e-19 100.9 178 33.1
TAR629G1747 Trochodendron aralioides HOM05D006650 ORTHO05D000624 2.3e-19 100.5 80 65.0
PRCOL_00002951 Prasinoderma coloniale HOM05D006650 ORTHO05D008401 5.7e-18 95.9 192 33.3
Eucgr.G02394 Eucalyptus grandis HOM05D006650 ORTHO05D008401 2.0e-10 70.9 41 85.4
Zm00001eb068230 Zea mays HOM05D000001 ORTHO05D000003 1.7e-09 67.8 52 61.5
Peaxi162Scf00004g02825 Petunia axillaris HOM05D006650 ORTHO05D008401 2.3e-06 57.4 70 50.0


User provided reference genes

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