Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.T013100 Populus trichocarpa HOM05D009279 ORTHO05D011257 2.8e-183 645.2 343 100.0
Potri.018G145526 Populus trichocarpa HOM05D009279 ORTHO05D011257 2.9e-71 273.1 147 100.0
Haze_19372 Corylus avellana HOM05D009279 ORTHO05D011257 2.3e-47 193.7 343 42.0
TWI79G0814 Tripterygium wilfordii HOM05D009279 ORTHO05D011257 1.2e-43 181.4 355 41.1
Thecc.01G145700 Theobroma cacao HOM05D009279 ORTHO05D011257 3.4e-43 179.9 352 42.0
Cfa020940 Carpinus fangiana HOM05D009279 ORTHO05D011257 2.1e-40 170.6 348 41.4
Cpa.g.sc138.53 Carica papaya HOM05D009279 ORTHO05D011257 1.1e-36 158.3 344 37.8
Lj5g0013459 Lotus japonicus HOM05D009279 ORTHO05D011257 2.3e-36 157.1 337 39.5
Medtr1g077140 Medicago truncatula HOM05D009279 ORTHO05D011257 1.2e-35 154.8 324 37.3
Psat6g111760 Pisum sativum HOM05D009279 ORTHO05D011257 3.9e-31 139.8 328 35.4
Aqoxy6G00047 Aquilegia oxysepala HOM05D009279 ORTHO05D011257 8.6e-31 138.7 364 33.5
Psat6g111800 Pisum sativum HOM05D009279 ORTHO05D011257 8.6e-31 138.7 332 36.4
Glyma.10G175600 Glycine max HOM05D009279 ORTHO05D011257 1.9e-30 137.5 345 36.2
TPR.G16621 Trifolium pratense HOM05D009279 ORTHO05D011257 1.9e-30 137.5 323 36.8
Phvul.007G114700 Phaseolus vulgaris HOM05D009279 ORTHO05D011257 2.5e-30 137.1 326 37.7
Glyma.20G214900 Glycine max HOM05D009279 ORTHO05D011257 5.6e-30 136.0 345 35.1
Glyma.16G208000 Glycine max HOM05D009279 ORTHO05D011257 1.6e-29 134.4 345 35.7
Lalb_Chr06g0168731 Lupinus albus HOM05D009279 ORTHO05D011257 1.1e-28 131.7 328 36.0
Glyma.09G157500 Glycine max HOM05D009279 ORTHO05D011257 3.1e-28 130.2 345 35.9
VMungo0464G0081 Vigna mungo HOM05D009279 ORTHO05D011257 8.9e-28 128.6 342 34.2
Ca_09909_v3 Cicer arietinum L. HOM05D009279 ORTHO05D011257 9.9e-27 125.2 324 34.3
VMungo0720G2603 Vigna mungo HOM05D009279 ORTHO05D011257 2.9e-26 123.6 326 37.1
EL10Ac4g09710 Beta vulgaris HOM05D009279 ORTHO05D011257 3.8e-26 123.2 346 32.4
Lj2g0023311 Lotus japonicus HOM05D009279 ORTHO05D011257 1.4e-25 121.3 330 33.6
AUR62000582 Chenopodium quinoa HOM05D009279 ORTHO05D011257 5.4e-25 119.4 347 34.3
Lalb_Chr03g0033361 Lupinus albus HOM05D009279 ORTHO05D011257 5.4e-25 119.4 327 32.7
arahy.Tifrunner.gnm1.ann1.JKND9T Arachis hypogaea HOM05D009279 ORTHO05D011257 3.0e-23 113.6 349 33.0
HPP92_024400 Vanilla planifolia HOM05D009279 ORTHO05D011257 1.2e-16 91.7 355 28.5
Phvul.004G132600 Phaseolus vulgaris HOM05D009279 ORTHO05D011257 1.7e-15 87.8 342 29.2
AUR62006938 Chenopodium quinoa HOM05D009279 ORTHO05D011257 7.6e-11 72.4 271 32.1
Pp3c23_10870 Physcomitrium patens HOM05D002440 ORTHO05D002576 3.2e-09 67.0 343 28.0
Pp3c20_12050 Physcomitrium patens HOM05D002440 ORTHO05D002576 1.2e-08 65.1 336 27.7
Sc16g0009940 Simmondsia chinensis HOM05D009279 ORTHO05D011257 1.6e-08 64.7 166 34.9
Pp3c23_16590 Physcomitrium patens HOM05D002440 ORTHO05D002576 2.7e-08 63.9 336 28.6
SEGI_34723 Sequoiadendron giganteum HOM05D002440 ORTHO05D002576 4.6e-08 63.2 322 27.0
Os11g0241000 Oryza sativa ssp. japonica HOM05D009279 ORTHO05D011257 7.9e-08 62.4 173 28.3
RcHm_v2.0_Chr4g0446391 Rosa chinensis HOM05D002440 ORTHO05D002576 2.3e-07 60.8 314 26.1
Pp3c4_17910 Physcomitrium patens HOM05D002440 ORTHO05D002576 5.6e-06 56.2 311 28.3


User provided reference genes

Program Settings