Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G128400 Populus trichocarpa HOM05D005957 ORTHO05D007318 9.6e-101 370.2 186 100.0
Sabra19G0126000 Salix brachista HOM05D005957 ORTHO05D007318 4.8e-92 341.3 186 91.4
Potri.013G155300 Populus trichocarpa HOM05D005957 ORTHO05D007318 1.0e-78 297.0 185 83.2
Duzib168G0649 Durio zibethinus HOM05D005957 ORTHO05D007318 1.6e-63 246.5 184 68.5
GSVIVG01024580001 Vitis vinifera HOM05D005957 ORTHO05D007318 5.9e-58 228.0 182 64.3
Manes.18G139500 Manihot esculenta HOM05D005957 ORTHO05D007318 4.2e-56 221.9 186 62.9
Cfa011817 Carpinus fangiana HOM05D005957 ORTHO05D007318 5.5e-56 221.5 182 64.3
Haze_24453 Corylus avellana HOM05D005957 ORTHO05D007318 5.5e-56 221.5 183 64.5
Atru.chr1.2524 Acer truncatum HOM05D005957 ORTHO05D007318 9.4e-56 220.7 193 62.2
Hma1.2p1_0119F.1_g056870 Hydrangea macrophylla HOM05D005957 ORTHO05D007318 5.1e-54 214.9 180 62.2
COL.COLO4_11196 Corchorus olitorius HOM05D005957 ORTHO05D007318 8.8e-54 214.2 184 62.5
QL01p025125 Quercus lobata HOM05D005957 ORTHO05D007318 1.5e-53 213.4 182 63.2
CiPaw.13G065100 Carya illinoinensis HOM05D005957 ORTHO05D007318 9.7e-53 210.7 180 59.4
FvH4_3g40300 Fragaria vesca HOM05D005957 ORTHO05D007318 3.1e-51 205.7 180 59.4
Gohir.A05G129400 Gossypium hirsutum HOM05D005957 ORTHO05D007318 4.1e-51 205.3 192 60.9
FAN21G1009 Fragaria x ananassa HOM05D005957 ORTHO05D007318 5.3e-51 204.9 180 59.4
CiPaw.14G051700 Carya illinoinensis HOM05D005957 ORTHO05D007318 2.0e-50 203.0 177 59.9
Glyma.14G203500 Glycine max HOM05D005957 ORTHO05D007318 3.5e-50 202.2 181 60.8
CANSAT54G0691 Cannabis sativa HOM05D005957 ORTHO05D007318 5.9e-50 201.4 182 61.0
Gorai.009G137600 Gossypium raimondii HOM05D005957 ORTHO05D007318 7.7e-50 201.1 191 58.6
RcHm_v2.0_Chr5g0072641 Rosa chinensis HOM05D005957 ORTHO05D007318 1.3e-49 200.3 179 57.5
VMungo0647G0754 Vigna mungo HOM05D005957 ORTHO05D007318 2.9e-49 199.1 175 62.3
Peaxi162Scf01692g00003 Petunia axillaris HOM05D005957 ORTHO05D007318 5.0e-49 198.4 186 58.1
Sabra13G0125100 Salix brachista HOM05D005957 ORTHO05D007318 6.5e-49 198.0 112 83.9
Glyma.02G235500 Glycine max HOM05D005957 ORTHO05D007318 1.9e-48 196.4 181 60.2
Prupe.6G042800 Prunus persica HOM05D005957 ORTHO05D007318 2.5e-48 196.1 182 57.7
Nitab4.5_0007927g0010 Nicotiana tabacum HOM05D005957 ORTHO05D007318 3.2e-48 195.7 183 57.9
MD11G1055300 Malus domestica HOM05D005957 ORTHO05D007318 7.2e-48 194.5 186 55.9
Phvul.008G248400 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 1.2e-47 193.7 175 61.7
FAN16G3236 Fragaria x ananassa HOM05D005957 ORTHO05D007318 3.6e-47 192.2 158 62.7
FAN11G2330 Fragaria x ananassa HOM05D005957 ORTHO05D007318 4.7e-47 191.8 158 62.7
Ciclev10003853m.g Citrus clementina HOM05D005957 ORTHO05D007318 1.8e-46 189.9 197 55.8
MD03G1053700 Malus domestica HOM05D005957 ORTHO05D007318 2.3e-46 189.5 186 55.4
Cc01_g15210 Coffea canephora HOM05D005957 ORTHO05D007318 3.9e-46 188.7 177 57.1
Nitab4.5_0000002g0080 Nicotiana tabacum HOM05D005957 ORTHO05D007318 6.7e-46 188.0 185 56.2
Medtr5g075190 Medicago truncatula HOM05D005957 ORTHO05D007318 2.6e-45 186.0 181 54.7
Oeu064677.1 Olea europaea HOM05D005957 ORTHO05D007318 3.3e-45 185.7 170 54.1
Aqoxy2G00718 Aquilegia oxysepala HOM05D005957 ORTHO05D007318 4.4e-45 185.3 177 54.8
Psat2g052120 Pisum sativum HOM05D005957 ORTHO05D007318 9.7e-45 184.1 180 54.4
LjContig00141g0008224 Lotus japonicus HOM05D005957 ORTHO05D007318 8.2e-44 181.0 180 54.4
Peaxi162Scf00390g00049 Petunia axillaris HOM05D005957 ORTHO05D007318 1.8e-43 179.9 189 53.4
FAN25G1085 Fragaria x ananassa HOM05D005957 ORTHO05D007318 2.4e-43 179.5 153 59.5
TPR.G25771 Trifolium pratense HOM05D005957 ORTHO05D007318 3.1e-43 179.1 181 54.1
PGSC0003DMG400046061 Solanum tuberosum HOM05D005957 ORTHO05D007318 2.0e-42 176.4 186 52.2
TWI79G1455 Tripterygium wilfordii HOM05D005957 ORTHO05D007318 5.9e-42 174.9 117 72.6
Nitab4.5_0002091g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.7e-41 173.3 181 51.4
Solyc01g090870.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 5.0e-41 171.8 186 50.5
Thecc.09G362300 Theobroma cacao HOM05D005957 ORTHO05D007318 5.0e-41 171.8 111 73.0
Lalb_Chr17g0345591 Lupinus albus HOM05D005957 ORTHO05D007318 2.5e-40 169.5 183 50.8
Sopen01g036610 Solanum pennellii HOM05D005957 ORTHO05D007318 2.5e-40 169.5 186 50.0
Solyc06g082450.1 Solanum lycopersicum HOM05D005957 ORTHO05D007318 4.2e-40 168.7 180 54.4
Migut.N00743 Erythranthe guttata HOM05D005957 ORTHO05D007318 5.5e-40 168.3 200 49.0
Cpa.g.sc2.317 Carica papaya HOM05D005957 ORTHO05D007318 9.4e-40 167.5 109 71.6
THA.LOC104800785 Tarenaya hassleriana HOM05D005957 ORTHO05D007318 1.2e-39 167.2 189 49.7
MBI03_g02190_MAGBIO Magnolia biondii HOM05D005957 ORTHO05D007318 2.1e-39 166.4 177 51.4
Nitab4.5_0002759g0020 Nicotiana tabacum HOM05D005957 ORTHO05D007318 1.8e-38 163.3 181 49.7
CsaV3_6G019090 Cucumis sativus L. HOM05D005957 ORTHO05D007318 3.0e-38 162.5 175 54.3
TAR623G0423 Trochodendron aralioides HOM05D005957 ORTHO05D007318 4.0e-38 162.2 108 71.3
MELO3C026874.2 Cucumis melo HOM05D005957 ORTHO05D007318 5.7e-37 158.3 179 54.2
SGA_v2.0_scaffold77G25368 Striga asiatica HOM05D005957 ORTHO05D007318 9.7e-37 157.5 177 47.5
Migut.D00827 Erythranthe guttata HOM05D005957 ORTHO05D007318 1.7e-36 156.8 182 50.0
Sed0019639 Sechium edule HOM05D005957 ORTHO05D007318 1.7e-36 156.8 176 50.6
HanXRQChr01g0028631 Helianthus annuus HOM05D005957 ORTHO05D007318 2.8e-36 156.0 174 54.0
Aa31LG5G6330 Aethionema arabicum HOM05D005957 ORTHO05D007318 1.1e-35 154.1 197 46.2
CSS0038993 Camellia sinensis var. sinensis HOM05D005957 ORTHO05D007318 4.1e-35 152.1 110 66.4
Ah.08g217120 Amaranthus hybridus HOM05D005957 ORTHO05D007318 1.6e-34 150.2 170 50.0
AT2G30395 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 2.7e-34 149.4 184 45.7
Carub.0004s1155 Capsella rubella HOM05D005957 ORTHO05D007318 5.9e-34 148.3 187 47.1
Gohir.D05G134050 Gossypium hirsutum HOM05D005957 ORTHO05D007318 5.9e-34 148.3 119 64.7
HanXRQChr17g0565391 Helianthus annuus HOM05D005957 ORTHO05D007318 7.7e-34 147.9 167 49.7
AL4G25260 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.0e-33 147.5 185 45.9
Ca_05700_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 1.0e-33 147.5 120 63.3
Ca_30026_v3 Cicer arietinum L. HOM05D005957 ORTHO05D007318 1.0e-33 147.5 120 63.3
Nn5g26879 Nelumbo nucifera HOM05D005957 ORTHO05D007318 1.0e-33 147.5 119 63.0
ClCG02G019100 Citrullus lanatus HOM05D005957 ORTHO05D007318 2.9e-33 146.0 172 51.7
CARHR123750 Cardamine hirsuta HOM05D005957 ORTHO05D007318 6.5e-33 144.8 199 44.7
Sp4g12950 Schrenkiella parvula HOM05D005957 ORTHO05D007318 6.5e-33 144.8 193 45.6
A04p23170 Brassica napus HOM05D005957 ORTHO05D007318 8.5e-33 144.4 190 49.5
vmacro02888 Vaccinium macrocarpon HOM05D005957 ORTHO05D007318 5.5e-32 141.7 111 61.3
CAN.G1872.4 Capsicum annuum HOM05D005957 ORTHO05D007318 9.4e-32 141.0 123 61.0
Dinv04837 Davidia involucrata HOM05D005957 ORTHO05D007318 1.6e-31 140.2 108 64.8
BcaB06g28364 Brassica carinata HOM05D005957 ORTHO05D007318 3.6e-31 139.0 190 45.8
Sopen06g033830 Solanum pennellii HOM05D005957 ORTHO05D007318 3.6e-31 139.0 97 71.1
BcaC02g08022 Brassica carinata HOM05D005957 ORTHO05D007318 8.0e-31 137.9 191 48.2
C04p59320 Brassica napus HOM05D005957 ORTHO05D007318 8.0e-31 137.9 191 48.2
Rhsim13G0060900 Rhododendron simsii HOM05D005957 ORTHO05D007318 8.0e-31 137.9 104 65.4
BcaC02g11133 Brassica carinata HOM05D005957 ORTHO05D007318 1.4e-30 137.1 193 45.1
Eucgr.J01842 Eucalyptus grandis HOM05D005957 ORTHO05D007318 1.4e-30 137.1 121 60.3
Thhalv10017867m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.4e-30 137.1 193 44.6
EL10Ac7g16454 Beta vulgaris HOM05D005957 ORTHO05D007318 2.3e-30 136.3 246 37.8
BraA04t17844Z Brassica rapa HOM05D005957 ORTHO05D007318 2.3e-30 136.3 197 46.2
Dinv28722 Davidia involucrata HOM05D005957 ORTHO05D007318 2.3e-30 136.3 90 71.1
BolC4t23551H Brassica oleracea HOM05D005957 ORTHO05D007318 3.0e-30 136.0 193 44.6
C04p20120 Brassica napus HOM05D005957 ORTHO05D007318 5.2e-30 135.2 194 44.3
BolC4t27440H Brassica oleracea HOM05D005957 ORTHO05D007318 5.2e-30 135.2 197 46.2
BcaB02g10322 Brassica carinata HOM05D005957 ORTHO05D007318 6.8e-30 134.8 193 46.1
Lsat_1_v5_gn_0_40840 Lactuca sativa HOM05D005957 ORTHO05D007318 6.8e-30 134.8 113 61.1
BraA05t20430Z Brassica rapa HOM05D005957 ORTHO05D007318 1.2e-29 134.0 193 45.1
A05p15090 Brassica napus HOM05D005957 ORTHO05D007318 1.5e-29 133.7 193 44.0
ECA236G1285 Erigeron canadensis HOM05D005957 ORTHO05D007318 1.5e-29 133.7 116 60.3
MSTRG.17909 Avicennia marina HOM05D005957 ORTHO05D007318 2.0e-29 133.3 110 59.1
PSO017G7297 Papaver somniferum HOM05D005957 ORTHO05D007318 7.5e-29 131.3 171 49.1
ATR0681G143 Amborella trichopoda HOM05D005957 ORTHO05D007318 1.3e-28 130.6 160 48.8
Thhalv10017852m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 1.3e-28 130.6 193 44.0
PSO170G5428 Papaver somniferum HOM05D005957 ORTHO05D007318 1.3e-28 130.6 171 48.5
PGR119G2032 Punica granatum HOM05D005957 ORTHO05D007318 6.3e-28 128.3 185 47.0
SalBow6G3501 Salvia bowleyana HOM05D005957 ORTHO05D007318 4.1e-27 125.6 104 63.5
Oeu011373.1 Olea europaea HOM05D005957 ORTHO05D007318 7.0e-27 124.8 104 57.7
Phvul.006G076900 Phaseolus vulgaris HOM05D005957 ORTHO05D007318 3.8e-25 119.0 130 50.8
DCAR_023195 Daucus carota HOM05D005957 ORTHO05D007318 1.5e-24 117.1 203 39.4
Ah.15g095100 Amaranthus hybridus HOM05D005957 ORTHO05D007318 1.6e-23 113.6 212 36.8
Carub.0001s0622 Capsella rubella HOM05D005957 ORTHO05D007318 3.0e-22 109.4 175 42.3
Dinv12270 Davidia involucrata HOM05D005957 ORTHO05D007318 4.0e-22 109.0 86 61.6
AT1G06923 Arabidopsis thaliana HOM05D005957 ORTHO05D007318 6.8e-22 108.2 121 45.5
Sc21g0004870 Simmondsia chinensis HOM05D005957 ORTHO05D007318 8.9e-22 107.8 105 52.4
AL1G16950 Arabidopsis lyrata HOM05D005957 ORTHO05D007318 1.5e-21 107.1 118 46.6
Os07g0679100 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 1.5e-21 107.1 197 37.6
CARHR006600 Cardamine hirsuta HOM05D005957 ORTHO05D007318 7.5e-21 104.8 120 44.2
Sp1g05630 Schrenkiella parvula HOM05D005957 ORTHO05D007318 9.8e-21 104.4 115 47.0
Thhalv10009633m.g Eutrema salsugineum HOM05D005957 ORTHO05D007318 3.7e-20 102.4 115 46.1
AUR62007156 Chenopodium quinoa HOM05D003140 ORTHO05D003851 2.4e-19 99.8 126 43.7
Zm00001eb330630 Zea mays HOM05D005957 ORTHO05D007318 2.4e-19 99.8 68 66.2
Zm00001eb350230 Zea mays HOM05D005957 ORTHO05D007318 2.4e-19 99.8 199 37.2
Os05g0328300 Oryza sativa ssp. japonica HOM05D005957 ORTHO05D007318 3.1e-19 99.4 75 61.3
BcaC07g42550 Brassica carinata HOM05D005957 ORTHO05D007318 6.6e-17 91.7 67 56.7
A09p66670 Brassica napus HOM05D005957 ORTHO05D007318 1.6e-15 87.0 65 56.9
BraA09t42007Z Brassica rapa HOM05D005957 ORTHO05D007318 1.6e-15 87.0 65 56.9
BcaC07g42036 Brassica carinata HOM05D005957 ORTHO05D007318 2.8e-15 86.3 67 55.2
BcaC07g42037 Brassica carinata HOM05D005957 ORTHO05D007318 2.8e-15 86.3 67 55.2
C08p50900 Brassica napus HOM05D005957 ORTHO05D007318 2.8e-15 86.3 67 55.2
BolC8t52618H Brassica oleracea HOM05D005957 ORTHO05D007318 2.8e-15 86.3 67 55.2
CARHR123780 Cardamine hirsuta HOM05D005957 ORTHO05D007318 7.5e-13 78.2 157 37.6
SEGI_34718 Sequoiadendron giganteum HOM05D005957 ORTHO05D007318 1.5e-08 63.9 60 43.3


User provided reference genes

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