Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 3.9e-241 837.8 444 100.0
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 4.0e-222 774.6 443 92.8
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 1.2e-221 773.1 443 92.8
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 1.6e-199 699.5 444 84.0
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 2.3e-193 679.1 444 82.0
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 3.1e-150 535.8 447 69.1
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 2.2e-143 513.1 448 66.1
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 6.4e-127 458.4 464 58.6
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 8.3e-127 458.0 473 59.0
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 1.1e-126 457.6 464 58.6
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 3.2e-126 456.1 464 58.4
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 5.4e-126 455.3 471 59.9
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 3.1e-121 439.5 463 59.0
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 8.9e-121 438.0 468 58.8
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 3.4e-120 436.0 471 58.0
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 7.5e-120 434.9 469 56.9
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 6.4e-119 431.8 468 57.9
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 1.2e-117 427.6 463 58.5
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.2e-117 427.6 467 56.1
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 6.0e-117 425.2 462 55.6
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 5.1e-116 422.2 459 56.4
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.1e-115 421.0 459 55.8
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 1.7e-111 407.1 474 55.3
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 4.8e-106 389.0 473 53.9
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 1.4e-105 387.5 489 52.4
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 4.4e-104 382.5 474 53.0
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 1.9e-102 377.1 464 53.9
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 2.3e-100 370.2 494 53.0
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 1.5e-99 367.5 473 52.2
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.3e-99 366.3 464 53.2
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 5.6e-99 365.5 485 50.1
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 2.1e-98 363.6 485 49.7
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 2.8e-98 363.2 464 52.6
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 4.8e-98 362.5 485 49.5
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 8.1e-98 361.7 488 49.2
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 3.1e-97 359.8 502 49.4
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 2.6e-96 356.7 474 51.1
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.7e-95 354.0 461 49.9
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 3.8e-95 352.8 471 52.2
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 8.4e-95 351.7 465 51.4
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 1.1e-94 351.3 478 48.5
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 5.4e-94 349.0 465 51.2
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 1.2e-93 347.8 476 53.2
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 1.0e-92 344.7 468 49.4
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 3.0e-92 343.2 478 50.6
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 2.1e-90 337.0 486 49.0
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 3.7e-90 336.3 488 49.8
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 4.8e-90 335.9 492 49.4
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 1.8e-89 334.0 458 50.2
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 1.8e-89 334.0 484 47.9
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 2.4e-89 333.6 489 48.5
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 2.8e-82 310.1 463 47.7
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 5.3e-81 305.8 463 44.7
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 6.9e-81 305.4 493 47.9
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 9.0e-81 305.1 523 44.6
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 2.6e-80 303.5 434 50.5
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 7.6e-80 302.0 434 49.1
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 3.2e-78 296.6 456 46.7
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 3.2e-78 296.6 491 45.4
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 7.1e-78 295.4 434 47.5
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 2.1e-77 293.9 311 59.2
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 4.6e-77 292.7 455 46.8
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 4.6e-77 292.7 479 46.3
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 2.3e-76 290.4 476 44.5
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.1e-75 288.1 424 46.2
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 2.5e-75 287.0 466 45.5
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 7.4e-75 285.4 432 45.8
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 1.5e-72 277.7 493 43.0
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 1.3e-71 274.6 352 52.0
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 1.7e-71 274.2 421 47.3
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 5.0e-71 272.7 489 42.9
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 4.2e-70 269.6 470 44.0
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 1.4e-68 264.6 474 44.1
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 2.3e-68 263.8 451 45.5
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 2.0e-67 260.8 477 42.8
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 2.4e-65 253.8 441 45.8
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 4.1e-65 253.1 439 44.4
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 9.1e-65 251.9 464 41.8
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 2.1e-61 240.7 439 43.3
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 2.1e-61 240.7 486 41.2
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 3.3e-59 233.4 451 39.2
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 7.4e-59 232.3 528 39.2
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 9.7e-59 231.9 468 41.0
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 6.3e-58 229.2 439 42.1
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 8.2e-58 228.8 439 42.1
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 8.2e-58 228.8 482 40.2
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 8.2e-58 228.8 467 40.9
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 9.1e-57 225.3 477 40.5
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 9.1e-57 225.3 472 39.6
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 2.6e-56 223.8 441 42.4
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 5.0e-55 219.5 467 39.4
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 5.7e-51 206.1 480 38.5
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 6.3e-50 202.6 386 42.0
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 1.1e-49 201.8 453 38.4
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 1.8e-49 201.1 491 38.7
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 3.1e-49 200.3 492 38.4
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 1.7e-47 194.5 441 36.7
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 3.2e-46 190.3 442 36.0
SabraUnG0004200 Salix brachista HOM05D006426 ORTHO05D007737 1.5e-43 181.4 97 93.8
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 2.0e-43 181.0 372 39.0
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 2.4e-41 174.1 521 34.2
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 3.1e-41 173.7 442 35.5
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 4.5e-40 169.9 431 36.0
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 4.2e-38 163.3 472 35.2
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 4.7e-37 159.8 443 35.0
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 1.5e-35 154.8 466 34.5
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 1.2e-27 128.6 469 32.8
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 3.4e-27 127.1 440 33.6
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 8.3e-26 122.5 494 28.5
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 1.2e-24 118.6 161 50.9
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 1.0e-23 115.5 172 46.5
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 1.0e-20 105.5 180 45.6
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 8.9e-20 102.4 441 29.5
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 9.2e-17 92.4 162 38.9
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 6.0e-16 89.7 462 26.6
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 5.2e-12 76.6 70 57.1
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 4.4e-11 73.6 151 43.7
SGA_v2.0_scaffold51G18895 Striga asiatica HOM05D001803 ORTHO05D001686 7.5e-11 72.8 167 36.5
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 1.7e-10 71.6 155 40.0
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 2.4e-09 67.8 152 41.4
Os06g0683900 Oryza sativa ssp. japonica HOM05D032587 ORTHO05D037111 3.0e-07 60.8 142 34.5
SEGI_03078 Sequoiadendron giganteum HOM05D036155 ORTHO05D007737 5.6e-06 56.6 575 25.9


User provided reference genes

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