Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G112201 Populus trichocarpa HOM05D002328 ORTHO05D002433 4.9e-64 247.7 127 100.0
Potri.013G127100 Populus trichocarpa HOM05D002328 ORTHO05D002433 4.6e-38 161.4 108 79.6
Sabra13G0106100 Salix brachista HOM05D002328 ORTHO05D002433 6.0e-38 161.0 108 79.6
Prupe.1G207400 Prunus persica HOM05D002328 ORTHO05D002433 3.2e-31 138.7 108 70.4
Thecc.04G165400 Theobroma cacao HOM05D002328 ORTHO05D002433 4.2e-31 138.3 108 69.4
Atru.chr4.1423 Acer truncatum HOM05D002328 ORTHO05D002433 1.2e-30 136.7 108 68.5
Ciclev10019728m.g Citrus clementina HOM05D002328 ORTHO05D002433 1.2e-30 136.7 108 68.5
CiPaw.01G170300 Carya illinoinensis HOM05D002328 ORTHO05D002433 2.1e-30 136.0 108 67.6
Manes.04G035100 Manihot esculenta HOM05D002328 ORTHO05D002433 6.0e-30 134.4 108 68.5
Cfa015270 Carpinus fangiana HOM05D002328 ORTHO05D002433 6.7e-29 131.0 108 65.7
QL10p055924 Quercus lobata HOM05D002328 ORTHO05D002433 1.1e-28 130.2 108 67.6
Dinv33207 Davidia involucrata HOM05D002328 ORTHO05D002433 1.5e-28 129.8 108 66.7
Gohir.D10G123000 Gossypium hirsutum HOM05D002328 ORTHO05D002433 2.5e-28 129.0 107 69.2
Gorai.011G135500 Gossypium raimondii HOM05D002328 ORTHO05D002433 2.5e-28 129.0 107 69.2
COL.COLO4_04394 Corchorus olitorius HOM05D002328 ORTHO05D002433 4.3e-28 128.3 109 66.1
Haze_01357 Corylus avellana HOM05D002328 ORTHO05D002433 2.1e-27 125.9 108 63.9
Gohir.A10G144000 Gossypium hirsutum HOM05D002328 ORTHO05D002433 2.8e-27 125.6 107 68.2
MD04G1049200 Malus domestica HOM05D002328 ORTHO05D002433 2.8e-27 125.6 108 62.0
CANSAT56G1496 Cannabis sativa HOM05D002328 ORTHO05D002433 4.8e-27 124.8 107 63.6
Duzib212G0177 Durio zibethinus HOM05D002328 ORTHO05D002433 8.2e-27 124.0 108 66.7
TWI38G1803 Tripterygium wilfordii HOM05D002328 ORTHO05D002433 1.1e-26 123.6 106 67.0
Duzib151G0293 Durio zibethinus HOM05D002328 ORTHO05D002433 1.8e-26 122.9 108 63.9
GSVIVG01038145001 Vitis vinifera HOM05D002328 ORTHO05D002433 4.0e-26 121.7 118 59.3
MSTRG.22034 Avicennia marina HOM05D002328 ORTHO05D002433 1.5e-25 119.8 107 59.8
CsaV3_4G002710 Cucumis sativus L. HOM05D002328 ORTHO05D002433 1.3e-24 116.7 108 62.0
Cpa.g.sc9.369 Carica papaya HOM05D002328 ORTHO05D002433 3.8e-24 115.2 107 59.8
ClCG07G015140 Citrullus lanatus HOM05D002328 ORTHO05D002433 3.8e-24 115.2 106 61.3
DCAR_027522 Daucus carota HOM05D002328 ORTHO05D002433 4.9e-24 114.8 108 54.6
vmacro00694 Vaccinium macrocarpon HOM05D002328 ORTHO05D002433 1.4e-23 113.2 118 56.8
CSS0046222 Camellia sinensis var. sinensis HOM05D002328 ORTHO05D002433 2.5e-23 112.5 115 57.4
Rhsim09G0009700 Rhododendron simsii HOM05D002328 ORTHO05D002433 4.2e-23 111.7 117 54.7
Eucgr.L00004 Eucalyptus grandis HOM05D002328 ORTHO05D002433 7.1e-23 110.9 107 56.1
Aa31LG10G13960 Aethionema arabicum HOM05D002328 ORTHO05D002433 9.3e-23 110.5 108 58.3
Lj6A211T19 Lonicera japonica HOM05D002328 ORTHO05D002433 9.3e-23 110.5 109 56.9
Lj6A222T13 Lonicera japonica HOM05D002328 ORTHO05D002433 9.3e-23 110.5 109 56.9
Sed0014065 Sechium edule HOM05D002328 ORTHO05D002433 9.3e-23 110.5 106 56.6
MELO3C017769.2 Cucumis melo HOM05D002328 ORTHO05D002433 1.2e-22 110.2 106 59.4
RcHm_v2.0_Chr7g0224241 Rosa chinensis HOM05D002328 ORTHO05D002433 2.1e-22 109.4 107 55.1
Migut.N03064 Erythranthe guttata HOM05D002328 ORTHO05D002433 3.5e-22 108.6 108 59.3
Peaxi162Scf00483g00067 Petunia axillaris HOM05D002328 ORTHO05D002433 4.6e-22 108.2 107 57.9
Lalb_Chr05g0218891 Lupinus albus HOM05D002328 ORTHO05D002433 1.0e-21 107.1 107 57.0
FvH4_5g30050 Fragaria vesca HOM05D002328 ORTHO05D002433 1.3e-21 106.7 107 56.1
PGSC0003DMG400008716 Solanum tuberosum HOM05D002328 ORTHO05D002433 1.3e-21 106.7 107 57.0
TAR633G2789 Trochodendron aralioides HOM05D002328 ORTHO05D002433 1.3e-21 106.7 107 57.0
Nitab4.5_0000474g0080 Nicotiana tabacum HOM05D002328 ORTHO05D002433 1.8e-21 106.3 107 57.9
Nitab4.5_0000793g0010 Nicotiana tabacum HOM05D002328 ORTHO05D002433 3.0e-21 105.5 107 57.9
Solyc03g062900.3 Solanum lycopersicum HOM05D002328 ORTHO05D002433 3.0e-21 105.5 107 56.1
THA.LOC104804014 Tarenaya hassleriana HOM05D002328 ORTHO05D002433 3.0e-21 105.5 108 59.3
FAN13G1531 Fragaria x ananassa HOM05D002328 ORTHO05D002433 3.9e-21 105.1 107 54.2
TAR636G2725 Trochodendron aralioides HOM05D002328 ORTHO05D002433 5.1e-21 104.8 106 54.7
Hund03204 Selenicereus undatus HOM05D002328 ORTHO05D002433 6.7e-21 104.4 107 54.2
Cc03_g14160 Coffea canephora HOM05D002328 ORTHO05D002433 8.7e-21 104.0 107 51.4
Sopen03g015180 Solanum pennellii HOM05D002328 ORTHO05D002433 8.7e-21 104.0 107 56.1
Sc07g0007150 Simmondsia chinensis HOM05D002328 ORTHO05D002433 1.1e-20 103.6 132 49.2
AT3G59670 Arabidopsis thaliana HOM05D002328 ORTHO05D002433 1.9e-20 102.8 110 57.3
EL10Ac3g06095 Beta vulgaris HOM05D002328 ORTHO05D002433 3.3e-20 102.1 108 54.6
Glyma.02G137800 Glycine max HOM05D002328 ORTHO05D002433 4.3e-20 101.7 111 54.1
Lalb_Chr16g0384411 Lupinus albus HOM05D002328 ORTHO05D002433 4.3e-20 101.7 107 54.2
Phvul.003G296900 Phaseolus vulgaris HOM05D002328 ORTHO05D002433 4.3e-20 101.7 107 58.9
Thhalv10005896m.g Eutrema salsugineum HOM05D002328 ORTHO05D002433 5.7e-20 101.3 109 57.8
Sp5g03510 Schrenkiella parvula HOM05D002328 ORTHO05D002433 7.4e-20 100.9 109 57.8
FAN04G0476 Fragaria x ananassa HOM05D002328 ORTHO05D002433 1.3e-19 100.1 103 55.3
VMungo0251G0850 Vigna mungo HOM05D002328 ORTHO05D002433 1.6e-19 99.8 105 59.0
arahy.Tifrunner.gnm1.ann1.K6L3AX Arachis hypogaea HOM05D002328 ORTHO05D002433 3.7e-19 98.6 108 54.6
arahy.Tifrunner.gnm1.ann1.L505QV Arachis hypogaea HOM05D002328 ORTHO05D002433 3.7e-19 98.6 108 54.6
Carub.0005s2639 Capsella rubella HOM05D002328 ORTHO05D002433 4.8e-19 98.2 110 56.4
Nn7g36180 Nelumbo nucifera HOM05D002328 ORTHO05D002433 4.8e-19 98.2 130 46.9
CAN.G316.13 Capsicum annuum HOM05D002328 ORTHO05D002433 1.4e-18 96.7 107 54.2
Glyma.07G207500 Glycine max HOM05D002328 ORTHO05D002433 1.4e-18 96.7 111 52.3
Oeu015717.1 Olea europaea HOM05D002328 ORTHO05D002433 4.1e-18 95.1 104 51.9
SalBow6G1888 Salvia bowleyana HOM05D002328 ORTHO05D002433 9.0e-18 94.0 109 52.3
AL5G41740 Arabidopsis lyrata HOM05D002328 ORTHO05D002433 2.0e-17 92.8 110 56.4
BcaB02g07453 Brassica carinata HOM05D002328 ORTHO05D002433 2.6e-17 92.4 109 53.2
BcaC08g45000 Brassica carinata HOM05D002328 ORTHO05D002433 2.6e-17 92.4 109 54.1
C06p26320 Brassica napus HOM05D002328 ORTHO05D002433 2.6e-17 92.4 109 54.1
BolC6t37795H Brassica oleracea HOM05D002328 ORTHO05D002433 2.6e-17 92.4 109 54.1
BcaC07g40498 Brassica carinata HOM05D002328 ORTHO05D002433 3.4e-17 92.0 111 54.1
C08p34670 Brassica napus HOM05D002328 ORTHO05D002433 3.4e-17 92.0 111 54.1
BolC8t51069H Brassica oleracea HOM05D002328 ORTHO05D002433 3.4e-17 92.0 111 54.1
AUR62023788 Chenopodium quinoa HOM05D002328 ORTHO05D002433 5.9e-17 91.3 106 50.0
BraA09t40632Z Brassica rapa HOM05D002328 ORTHO05D002433 2.2e-16 89.4 111 53.2
Medtr4g087360 Medicago truncatula HOM05D002328 ORTHO05D002433 3.8e-16 88.6 108 50.0
A09p51990 Brassica napus HOM05D002328 ORTHO05D002433 6.5e-16 87.8 111 52.3
SGA_v2.0_scaffold19G08846 Striga asiatica HOM05D002328 ORTHO05D002433 1.1e-15 87.0 109 48.6
PGR042G1105 Punica granatum HOM05D002328 ORTHO05D002433 1.4e-15 86.7 119 47.1
BraA07t30120Z Brassica rapa HOM05D002328 ORTHO05D002433 1.9e-15 86.3 108 49.1
Nn7g36814 Nelumbo nucifera HOM05D002328 ORTHO05D002433 1.9e-15 86.3 114 49.1
Nn7g36818 Nelumbo nucifera HOM05D002328 ORTHO05D002433 1.9e-15 86.3 114 49.1
A07p24740 Brassica napus HOM05D002328 ORTHO05D002433 3.2e-15 85.5 108 49.1
CARHR170040 Cardamine hirsuta HOM05D002328 ORTHO05D002433 4.2e-15 85.1 110 50.9
Ca_18636_v3 Cicer arietinum L. HOM05D002328 ORTHO05D002433 7.9e-14 80.9 105 51.4
Psat7g120120 Pisum sativum HOM05D002328 ORTHO05D002433 7.9e-14 80.9 109 46.8
Lj4g0015409 Lotus japonicus HOM05D002328 ORTHO05D002433 1.0e-13 80.5 107 46.7
MBI04_g13618_MAGBIO Magnolia biondii HOM05D002328 ORTHO05D002433 1.4e-13 80.1 109 48.6
Dinv43629 Davidia involucrata HOM05D002328 ORTHO05D002433 5.7e-12 74.7 124 41.9
Ah.13g073450 Amaranthus hybridus HOM05D002328 ORTHO05D002433 1.3e-11 73.6 109 49.5
AUR62002399 Chenopodium quinoa HOM05D002328 ORTHO05D002433 2.8e-11 72.4 107 44.9
Psat0s2862g0040 Pisum sativum HOM05D002328 ORTHO05D002433 3.1e-10 68.9 96 46.9
MD17G1177900 Malus domestica HOM05D002328 ORTHO05D002433 6.9e-10 67.8 84 52.4
Rhsim01G0139500 Rhododendron simsii HOM05D002328 ORTHO05D002433 6.9e-10 67.8 85 49.4
Psat0s2862g0080 Pisum sativum HOM05D000840 ORTHO05D000670 2.6e-09 65.9 96 45.8
vmacro21055 Vaccinium macrocarpon HOM05D002328 ORTHO05D002433 5.9e-09 64.7 107 41.1
GSVIVG01018258001 Vitis vinifera HOM05D002328 ORTHO05D002433 7.7e-09 64.3 84 48.8
PSO384G5057 Papaver somniferum HOM05D002328 ORTHO05D002433 1.0e-08 63.9 104 38.5
ECA248G1193 Erigeron canadensis HOM05D002328 ORTHO05D002433 1.3e-08 63.5 107 38.3
Dinv44070 Davidia involucrata HOM05D002328 ORTHO05D002433 2.9e-08 62.4 117 41.0
Actinidia12647 Actinidia chinensis HOM05D002328 ORTHO05D002433 5.0e-08 61.6 107 37.4
TPR.G23547 Trifolium pratense HOM05D002328 ORTHO05D009019 5.0e-08 61.6 106 41.5
PSO339G2753 Papaver somniferum HOM05D002328 ORTHO05D002433 8.5e-08 60.8 104 37.5
Sabra19G0108200 Salix brachista HOM05D002328 ORTHO05D002433 1.1e-07 60.5 42 76.2
Actinidia33503 Actinidia chinensis HOM05D002328 ORTHO05D002433 1.9e-07 59.7 107 36.4
Actinidia27114 Actinidia chinensis HOM05D002328 ORTHO05D002433 2.1e-06 56.2 43 62.8
Hma1.2p1_0108F.1_g051740 Hydrangea macrophylla HOM05D002328 ORTHO05D002433 7.9e-06 54.3 45 62.2


User provided reference genes

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