Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 4.9e-29 130.6 71 100.0
Potri.019G111501 Populus trichocarpa HOM05D005953 ORTHO05D004056 2.1e-19 98.6 73 80.8
Sabra13G0111400 Salix brachista HOM05D005953 ORTHO05D004056 1.5e-17 92.4 71 73.2
Potri.013G131900 Populus trichocarpa HOM05D005953 ORTHO05D004056 8.1e-16 86.7 71 70.4
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 2.7e-11 71.6 73 63.0
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 2.7e-11 71.6 73 63.0
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 1.3e-10 69.3 79 57.0
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 1.7e-10 68.9 76 55.3
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 2.3e-10 68.6 76 59.2
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 3.0e-10 68.2 73 60.3
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 3.0e-10 68.2 79 59.5
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 6.6e-10 67.0 73 60.3
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 8.6e-10 66.6 78 57.7
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 2.5e-09 65.1 70 58.6
Manes.13G147000 Manihot esculenta HOM05D005953 ORTHO05D004056 2.5e-09 65.1 77 57.1
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 3.3e-09 64.7 73 56.2
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 3.3e-09 64.7 71 56.3
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 5.6e-09 63.9 75 57.3
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 7.3e-09 63.5 75 57.3
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 9.5e-09 63.2 73 61.6
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 1.2e-08 62.8 74 60.8
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 1.6e-08 62.4 77 54.5
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 2.8e-08 61.6 75 56.0
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 2.8e-08 61.6 75 56.0
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 1.1e-07 59.7 78 53.8
Phvul.011G114200 Phaseolus vulgaris HOM05D005953 ORTHO05D004056 1.8e-07 58.9 75 52.0
PGR042G2028 Punica granatum HOM05D005953 ORTHO05D004056 1.8e-07 58.9 90 47.8
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 4.0e-07 57.8 72 55.6
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 6.8e-07 57.0 75 52.0
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 6.8e-07 57.0 71 53.5
HPP92_014983 Vanilla planifolia HOM05D005953 ORTHO05D004056 6.8e-07 57.0 76 55.3
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 8.9e-07 56.6 76 51.3
Hund01100 Selenicereus undatus HOM05D005953 ORTHO05D004056 8.9e-07 56.6 69 50.7
CiPaw.03G176600 Carya illinoinensis HOM05D005953 ORTHO05D004056 1.2e-06 56.2 71 52.1
Lsat_1_v5_gn_3_37261 Lactuca sativa HOM05D005953 ORTHO05D004056 1.2e-06 56.2 75 50.7
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.5e-06 55.8 81 50.6
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 1.5e-06 55.8 81 50.6
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 2.0e-06 55.5 82 47.6
Cfa014612 Carpinus fangiana HOM05D005953 ORTHO05D004056 2.6e-06 55.1 73 52.1
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 2.6e-06 55.1 80 48.8
ECA246G2973 Erigeron canadensis HOM05D005953 ORTHO05D004056 2.6e-06 55.1 76 50.0
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 2.6e-06 55.1 76 51.3
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 3.4e-06 54.7 73 50.7
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 3.4e-06 54.7 82 48.8
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 3.4e-06 54.7 77 51.9
HPP92_014946 Vanilla planifolia HOM05D005953 ORTHO05D004056 3.4e-06 54.7 76 53.9
CiPaw.04G125700 Carya illinoinensis HOM05D005953 ORTHO05D004056 4.4e-06 54.3 74 48.6
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 4.4e-06 54.3 73 54.8
Aqoxy1G02469 Aquilegia oxysepala HOM05D005953 ORTHO05D004056 5.8e-06 53.9 82 52.4
ClCG02G017620 Citrullus lanatus HOM05D005953 ORTHO05D004056 5.8e-06 53.9 73 52.1
ECA233G3589 Erigeron canadensis HOM05D000020 ORTHO05D000543 5.8e-06 53.9 62 50.0
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 5.8e-06 53.9 71 46.5
Lj3g0009023 Lotus japonicus HOM05D005953 ORTHO05D004056 5.8e-06 53.9 73 54.8
Nitab4.5_0002253g0010 Nicotiana tabacum HOM05D005953 ORTHO05D004056 7.6e-06 53.5 78 48.7
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 9.9e-06 53.1 80 48.8
HanXRQChr06g0171331 Helianthus annuus HOM05D005953 ORTHO05D004056 9.9e-06 53.1 76 47.4
Peaxi162Scf00008g00097 Petunia axillaris HOM05D005953 ORTHO05D004056 9.9e-06 53.1 72 47.2
Psat0s741g0120 Pisum sativum HOM05D005953 ORTHO05D004056 9.9e-06 53.1 70 50.0


User provided reference genes

Program Settings