Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G090800 Populus trichocarpa HOM05D008879 ORTHO05D010552 1.1e-38 162.9 86 100.0
Sabra19G0104400 Salix brachista HOM05D008879 ORTHO05D010552 2.6e-32 141.7 86 88.4
Sabra13G0100400 Salix brachista HOM05D008879 ORTHO05D010552 7.2e-19 97.1 64 71.9
Ciclev10018336m.g Citrus clementina HOM05D008879 ORTHO05D010552 2.9e-12 75.1 85 51.8
Cfa014709 Carpinus fangiana HOM05D024358 ORTHO05D024888 1.2e-10 69.7 86 47.7
Haze_13337 Corylus avellana HOM05D024358 ORTHO05D024888 1.6e-10 69.3 79 46.8
THA.LOC104815845 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 1.6e-10 69.3 73 50.7
Haze_13336 Corylus avellana HOM05D024358 ORTHO05D024888 2.1e-10 68.9 79 46.8
TWI14G0991 Tripterygium wilfordii HOM05D008879 ORTHO05D010552 2.8e-10 68.6 91 46.2
CARHR124660 Cardamine hirsuta HOM05D008879 ORTHO05D010552 4.7e-10 67.8 78 47.4
BcaB06g28411 Brassica carinata HOM05D008879 ORTHO05D010552 1.4e-09 66.2 74 50.0
AT2G31083 Arabidopsis thaliana HOM05D008879 ORTHO05D010552 3.0e-09 65.1 74 48.6
THA.LOC104826219 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 3.0e-09 65.1 74 48.6
THA.LOC104826220 Tarenaya hassleriana HOM05D008879 ORTHO05D010552 3.0e-09 65.1 74 48.6
Atru.chr6.2826 Acer truncatum HOM05D008879 ORTHO05D010552 4.0e-09 64.7 90 48.9
Cfa014708 Carpinus fangiana HOM05D024358 ORTHO05D024888 4.0e-09 64.7 86 45.3
Haze_13553 Corylus avellana HOM05D024358 ORTHO05D024888 4.0e-09 64.7 79 46.8
BcaB06g28488 Brassica carinata HOM05D008879 ORTHO05D010552 5.2e-09 64.3 74 47.3
C04p60330 Brassica napus HOM05D008879 ORTHO05D010552 5.2e-09 64.3 74 47.3
BolC4t27533H Brassica oleracea HOM05D008879 ORTHO05D010552 5.2e-09 64.3 74 47.3
AL4G26260 Arabidopsis lyrata HOM05D008879 ORTHO05D010552 6.8e-09 63.9 74 47.3
CARHR124670 Cardamine hirsuta HOM05D008879 ORTHO05D010552 6.8e-09 63.9 73 50.7
BraA03t11008Z Brassica rapa HOM05D008879 ORTHO05D010552 8.9e-09 63.5 77 49.4
Sp4g13570 Schrenkiella parvula HOM05D008879 ORTHO05D010552 8.9e-09 63.5 80 45.0
A04p23850 Brassica napus HOM05D008879 ORTHO05D010552 1.5e-08 62.8 74 45.9
BraA04t17908Z Brassica rapa HOM05D008879 ORTHO05D010552 1.5e-08 62.8 74 45.9
Carub.0004s1233 Capsella rubella HOM05D008879 ORTHO05D010552 1.5e-08 62.8 73 47.9
Cfa014710 Carpinus fangiana HOM05D008879 ORTHO05D010552 2.6e-08 62.0 78 44.9
Carub.0004s1234 Capsella rubella HOM05D008879 ORTHO05D010552 3.4e-08 61.6 74 45.9
BcaB01g04065 Brassica carinata HOM05D008879 ORTHO05D010552 4.4e-08 61.2 74 45.9
A03p17370 Brassica napus HOM05D008879 ORTHO05D010552 4.4e-08 61.2 77 48.1
Atru.chr6.2827 Acer truncatum HOM05D019843 ORTHO05D010552 7.5e-08 60.5 79 43.0
Haze_13339 Corylus avellana HOM05D008879 ORTHO05D010552 7.5e-08 60.5 78 43.6
BcaB02g10362 Brassica carinata HOM05D008879 ORTHO05D010552 1.3e-07 59.7 76 48.7
Duzib147G0511 Durio zibethinus HOM05D002374 ORTHO05D010552 1.3e-07 59.7 78 43.6
A05p14570 Brassica napus HOM05D008879 ORTHO05D010552 1.7e-07 59.3 73 43.8
C03p20490 Brassica napus HOM05D008879 ORTHO05D010552 1.7e-07 59.3 77 49.4
BcaC01g05980 Brassica carinata HOM05D008879 ORTHO05D010552 2.2e-07 58.9 77 49.4
BolC3t14429H Brassica oleracea HOM05D008879 ORTHO05D010552 2.2e-07 58.9 77 49.4
Thhalv10017588m.g Eutrema salsugineum HOM05D008879 ORTHO05D010552 2.2e-07 58.9 74 43.2
BcaC02g11194 Brassica carinata HOM05D008879 ORTHO05D010552 2.8e-07 58.5 73 42.5
C04p19410 Brassica napus HOM05D008879 ORTHO05D010552 2.8e-07 58.5 73 42.5
BolC4t23473H Brassica oleracea HOM05D008879 ORTHO05D010552 2.8e-07 58.5 73 42.5
Potri.011G096900 Populus trichocarpa HOM05D017499 ORTHO05D010552 2.8e-07 58.5 82 40.2
Gohir.A09G002400 Gossypium hirsutum HOM05D019843 ORTHO05D010552 3.7e-07 58.2 72 44.4
Gohir.D09G002200 Gossypium hirsutum HOM05D019843 ORTHO05D010552 3.7e-07 58.2 72 44.4
Gorai.006G002700 Gossypium raimondii HOM05D019843 ORTHO05D010552 3.7e-07 58.2 72 44.4
TAR624G1413 Trochodendron aralioides HOM05D000001 ORTHO05D000003 6.3e-07 57.4 79 40.5
Potri.001G376200 Populus trichocarpa HOM05D008879 ORTHO05D010552 1.1e-06 56.6 77 41.6
Gohir.D09G002000 Gossypium hirsutum HOM05D045456 ORTHO05D010552 2.4e-06 55.5 80 38.8
Gorai.006G002100 Gossypium raimondii HOM05D045456 ORTHO05D010552 2.4e-06 55.5 80 38.8
AT2G31085 Arabidopsis thaliana HOM05D008879 ORTHO05D010552 4.1e-06 54.7 74 43.2
Gorai.002G063600 Gossypium raimondii HOM05D017499 ORTHO05D010552 5.4e-06 54.3 87 39.1
Aa31LG5G5820 Aethionema arabicum HOM05D008879 ORTHO05D010552 7.0e-06 53.9 63 50.8
Lsat_1_v5_gn_7_23461 Lactuca sativa HOM05D012232 ORTHO05D010552 7.0e-06 53.9 81 43.2
AL4G26270 Arabidopsis lyrata HOM05D008879 ORTHO05D010552 9.2e-06 53.5 79 40.5
Gohir.A01G058000 Gossypium hirsutum HOM05D017499 ORTHO05D010552 9.2e-06 53.5 87 37.9
Gohir.D01G044400 Gossypium hirsutum HOM05D017499 ORTHO05D010552 9.2e-06 53.5 87 37.9
Sopen07g027340 Solanum pennellii HOM05D028609 ORTHO05D019109 9.2e-06 53.5 74 41.9


User provided reference genes

Program Settings