Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.019G079800 Populus trichocarpa HOM05D007776 ORTHO05D009812 6.1e-79 297.7 188 100.0
Potri.013G107300 Populus trichocarpa HOM05D007776 ORTHO05D009812 6.6e-57 224.6 189 68.3
Sabra19G0091100 Salix brachista HOM05D007776 ORTHO05D009812 3.5e-50 202.2 128 86.7
Sabra13G0092600 Salix brachista HOM05D007776 ORTHO05D009812 5.4e-43 178.3 128 73.4
Manes.02G198100 Manihot esculenta HOM05D007776 ORTHO05D009812 6.2e-39 164.9 188 50.0
TWI14G0313 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 3.8e-28 129.0 140 54.3
RcHm_v2.0_Chr7g0227891 Rosa chinensis HOM05D007776 ORTHO05D009812 1.6e-26 123.6 128 57.8
Gohir.D05G288000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 2.7e-26 122.9 143 51.7
Gorai.009G303100 Gossypium raimondii HOM05D007776 ORTHO05D009812 2.7e-26 122.9 143 51.7
FAN04G1877 Fragaria x ananassa HOM05D007776 ORTHO05D009812 5.1e-25 118.6 129 56.6
PGR042G2621 Punica granatum HOM05D007776 ORTHO05D009812 6.6e-25 118.2 147 56.5
Prupe.1G555000 Prunus persica HOM05D007776 ORTHO05D009812 1.1e-24 117.5 136 52.9
FAN04G0521 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.5e-24 117.1 129 55.8
FAN08G2421 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.5e-24 117.1 129 55.8
FAN18G1270 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.5e-24 117.1 127 56.7
Gohir.A05G287000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 1.5e-24 117.1 143 49.7
Ciclev10002690m.g Citrus clementina HOM05D007776 ORTHO05D009812 3.3e-24 115.9 130 54.6
FvH4_5g31870 Fragaria vesca HOM05D007776 ORTHO05D009812 3.3e-24 115.9 129 55.0
Duzib177G0943 Durio zibethinus HOM05D007776 ORTHO05D009812 3.6e-23 112.5 135 51.1
TWI59G0674 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 4.7e-23 112.1 142 52.8
VMungo1080G1686 Vigna mungo HOM05D007776 ORTHO05D009812 2.4e-22 109.8 116 54.3
MD15G1406800 Malus domestica HOM05D007776 ORTHO05D009812 5.2e-22 108.6 139 48.9
Haze_21304 Corylus avellana HOM05D007776 ORTHO05D009812 3.4e-21 105.9 138 50.0
CANSAT25G0596 Cannabis sativa HOM05D007776 ORTHO05D009812 4.4e-21 105.5 119 54.6
Thecc.08G190700 Theobroma cacao HOM05D007776 ORTHO05D009812 4.4e-21 105.5 152 50.7
Cfa012949 Carpinus fangiana HOM05D007776 ORTHO05D009812 8.4e-20 101.3 138 47.8
Nn5g27525 Nelumbo nucifera HOM05D007776 ORTHO05D009812 3.2e-19 99.4 128 50.8
CiPaw.07G236300 Carya illinoinensis HOM05D007776 ORTHO05D009812 4.2e-19 99.0 141 48.9
Duzib116G0238 Durio zibethinus HOM05D007776 ORTHO05D009812 4.2e-19 99.0 139 51.1
CiPaw.05G123100 Carya illinoinensis HOM05D007776 ORTHO05D009812 9.3e-19 97.8 129 51.9
Sed0008767 Sechium edule HOM05D007776 ORTHO05D009812 3.5e-18 95.9 109 51.4
Carub.0001s3303 Capsella rubella HOM05D007776 ORTHO05D009812 1.7e-17 93.6 132 50.8
BraA09t38716Z Brassica rapa HOM05D007776 ORTHO05D009812 2.3e-17 93.2 115 53.0
CARHR034200 Cardamine hirsuta HOM05D007776 ORTHO05D009812 3.0e-17 92.8 106 53.8
C06p11140 Brassica napus HOM05D007776 ORTHO05D009812 5.1e-17 92.0 116 51.7
BolC6t36249H Brassica oleracea HOM05D007776 ORTHO05D009812 5.1e-17 92.0 116 51.7
Ca_14480_v3 Cicer arietinum L. HOM05D007776 ORTHO05D009812 5.1e-17 92.0 143 47.6
ClCG11G008540 Citrullus lanatus HOM05D007776 ORTHO05D009812 6.6e-17 91.7 140 44.3
Sp1g30150 Schrenkiella parvula HOM05D007776 ORTHO05D009812 6.6e-17 91.7 128 50.0
A09p31800 Brassica napus HOM05D007776 ORTHO05D009812 8.7e-17 91.3 115 53.0
Dinv41753 Davidia involucrata HOM05D000238 ORTHO05D002999 8.7e-17 91.3 123 47.2
Lj3g0020626 Lotus japonicus HOM05D007776 ORTHO05D009812 8.7e-17 91.3 119 57.1
THA.LOC104806792 Tarenaya hassleriana HOM05D007776 ORTHO05D009812 1.1e-16 90.9 146 45.9
BcaC08g43737 Brassica carinata HOM05D007776 ORTHO05D009812 1.5e-16 90.5 115 51.3
Cpa.g.sc507.3 Carica papaya HOM05D007776 ORTHO05D009812 1.9e-16 90.1 123 50.4
AT1G35430 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 3.3e-16 89.4 131 48.1
Lalb_Chr25g0282901 Lupinus albus HOM05D007776 ORTHO05D009812 4.3e-16 89.0 122 50.0
Aa31LG6G8730 Aethionema arabicum HOM05D007776 ORTHO05D009812 5.6e-16 88.6 136 46.3
AL1G50270 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 9.6e-16 87.8 108 52.8
Psat5g210040 Pisum sativum HOM05D007776 ORTHO05D009812 1.3e-15 87.4 132 44.7
Solyc01g087860.2 Solanum lycopersicum HOM05D007776 ORTHO05D009812 2.1e-15 86.7 140 45.0
Phvul.005G023800 Phaseolus vulgaris HOM05D007776 ORTHO05D009812 1.1e-14 84.3 111 48.6
Thhalv10001838m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 2.4e-14 83.2 129 45.7
Sopen01g034790 Solanum pennellii HOM05D007776 ORTHO05D009812 4.0e-14 82.4 124 47.6
Ah.05g178510 Amaranthus hybridus HOM05D007776 ORTHO05D009812 9.0e-14 81.3 135 41.5
PGSC0003DMG400006837 Solanum tuberosum HOM05D007776 ORTHO05D009812 1.5e-13 80.5 130 46.2
Medtr0045s0130 Medicago truncatula HOM05D007776 ORTHO05D009812 2.0e-13 80.1 139 42.4
QL02p026198 Quercus lobata HOM05D007776 ORTHO05D009812 2.9e-12 76.3 133 47.4
A03p28480 Brassica napus HOM05D007776 ORTHO05D009812 4.9e-12 75.5 118 44.1
BraA03t12053Z Brassica rapa HOM05D007776 ORTHO05D009812 4.9e-12 75.5 118 44.1
Glyma.15G276200 Glycine max HOM05D007776 ORTHO05D009812 4.9e-12 75.5 79 58.2
Migut.C01313 Erythranthe guttata HOM05D007776 ORTHO05D009812 6.4e-12 75.1 126 43.7
TPR.G27845 Trifolium pratense HOM05D000479 ORTHO05D009812 8.4e-12 74.7 137 39.4
Glyma.10G090400 Glycine max HOM05D007776 ORTHO05D009812 1.1e-11 74.3 79 55.7
TAR628G0395 Trochodendron aralioides HOM05D007776 ORTHO05D009812 1.1e-11 74.3 115 44.3
BcaB01g02801 Brassica carinata HOM05D007776 ORTHO05D009812 1.4e-11 73.9 122 43.4
BcaC01g04727 Brassica carinata HOM05D007776 ORTHO05D009812 2.4e-11 73.2 120 44.2
C03p34420 Brassica napus HOM05D007776 ORTHO05D009812 3.2e-11 72.8 120 44.2
BolC3t15751H Brassica oleracea HOM05D007776 ORTHO05D009812 3.2e-11 72.8 120 44.2
CARHR260240 Cardamine hirsuta HOM05D007776 ORTHO05D009812 7.1e-11 71.6 135 41.5
Thhalv10029064m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 7.1e-11 71.6 140 41.4
MD08G1218400 Malus domestica HOM05D007776 ORTHO05D009812 7.1e-11 71.6 104 46.2
CSS0049282 Camellia sinensis var. sinensis HOM05D007776 ORTHO05D009812 2.1e-10 70.1 106 47.2
Rhsim12G0006900 Rhododendron simsii HOM05D007776 ORTHO05D009812 6.0e-10 68.6 100 47.0
COL.COLO4_25869 Corchorus olitorius HOM05D007776 ORTHO05D009812 2.3e-09 66.6 56 60.7
Sp6g08370 Schrenkiella parvula HOM05D007776 ORTHO05D009812 3.9e-09 65.9 139 37.4
AL6G42920 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 2.5e-08 63.2 138 37.0
unitig_46.g17995 Utricularia gibba HOM05D007776 ORTHO05D009812 4.8e-07 58.9 93 39.8
Lsat_1_v5_gn_3_48301 Lactuca sativa HOM05D007776 ORTHO05D009812 6.2e-07 58.5 108 35.2


User provided reference genes

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